RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 ZCCHC6Q5VYS8 1495 aaKnown RBP6.47□□□□□ -1.37
CAST-242ENST00000515063 C1QTNF9BB2RNN3 333 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 ABL1P00519 1130 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 PROCP04070 461 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 MPSTP25325 297 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 SCNN1AP37088 669 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 FKBP4Q02790 459 aaKnown RBP eCLIP6.47□□□□□ -1.37
CAST-242ENST00000515063 DNM1Q05193 864 aaKnown RBP6.47□□□□□ -1.37
CAST-242ENST00000515063 EHHADHQ08426 723 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 MSL1Q68DK7 614 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 CD163Q86VB7 1156 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 EDEM1Q92611 657 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 PLD4Q96BZ4 506 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 EGFL7Q9UHF1 273 aa6.47□□□□□ -1.37
CAST-242ENST00000515063 A0A0A0MRY4 1105 aa6.46□□□□□ -1.38
CAST-242ENST00000515063 C9orf172C9J069 976 aa6.46□□□□□ -1.38
CAST-242ENST00000515063 PDGFAP04085 211 aa6.46□□□□□ -1.38
CAST-242ENST00000515063 NPR3P17342 541 aa6.46□□□□□ -1.38
CAST-242ENST00000515063 NRG1Q02297 640 aaPredicted RBP6.46□□□□□ -1.38
CAST-242ENST00000515063 PHLDB3Q6NSJ2 640 aa6.46□□□□□ -1.38
CAST-242ENST00000515063 HFE2Q6ZVN8 426 aa6.46□□□□□ -1.38
CAST-242ENST00000515063 ATCAYQ86WG3 371 aa6.46□□□□□ -1.38
CAST-242ENST00000515063 ELP3Q9H9T3 547 aa6.46□□□□□ -1.38
CAST-242ENST00000515063 SRA1Q9HD15 236 aaKnown RBP6.46□□□□□ -1.38
CAST-242ENST00000515063 FAM177BA6PVY3 158 aa6.45□□□□□ -1.38
CAST-242ENST00000515063 ITGB2P05107 769 aa6.45□□□□□ -1.38
CAST-242ENST00000515063 CHRNA4P43681 627 aa6.45□□□□□ -1.38
CAST-242ENST00000515063 XKR5Q6UX68 686 aa6.45□□□□□ -1.38
CAST-242ENST00000515063 PMEPA1Q969W9 287 aa6.45□□□□□ -1.38
CAST-242ENST00000515063 MUC3BQ9H195 1237 aa6.45□□□□□ -1.38
CAST-242ENST00000515063 FAM229AH3BQW9 127 aa6.44□□□□□ -1.38
CAST-242ENST00000515063 J3QW42 95 aa6.44□□□□□ -1.38
CAST-242ENST00000515063 SMNDC1O75940 238 aaKnown RBP eCLIP6.44□□□□□ -1.38
CAST-242ENST00000515063 GATA4P43694 442 aa6.44□□□□□ -1.38
CAST-242ENST00000515063 MTMR3Q13615 1198 aa6.44□□□□□ -1.38
CAST-242ENST00000515063 GRIK5Q16478 980 aa6.44□□□□□ -1.38
CAST-242ENST00000515063 C8orf34Q49A92 452 aa6.44□□□□□ -1.38
CAST-242ENST00000515063 NCAPG2Q86XI2 1143 aa6.44□□□□□ -1.38
CAST-242ENST00000515063 MAP4K3Q8IVH8 894 aa6.44□□□□□ -1.38
CAST-242ENST00000515063 DMRTC2Q8IXT2 367 aaPredicted RBP6.44□□□□□ -1.38
CAST-242ENST00000515063 FMR1NBQ8N0W7 255 aaPredicted RBP6.44□□□□□ -1.38
CAST-242ENST00000515063 RETREG2Q8NC44 543 aa6.44□□□□□ -1.38
CAST-242ENST00000515063 CARNS1A5YM72 827 aa6.43□□□□□ -1.38
CAST-242ENST00000515063 KIF4AO95239 1232 aa6.43□□□□□ -1.38
CAST-242ENST00000515063 BAG6P46379 1132 aa6.43□□□□□ -1.38
CAST-242ENST00000515063 GDF6Q6KF10 455 aaPredicted RBP6.43□□□□□ -1.38
CAST-242ENST00000515063 GLYCTKQ8IVS8 523 aa6.43□□□□□ -1.38
CAST-242ENST00000515063 ICMTO60725 284 aa6.42□□□□□ -1.38
CAST-242ENST00000515063 CES1P23141 567 aa6.42□□□□□ -1.38
CAST-242ENST00000515063 ZNF211Q13398 564 aaPredicted RBP6.42□□□□□ -1.38
CAST-242ENST00000515063 GRIK4Q16099 956 aa6.42□□□□□ -1.38
CAST-242ENST00000515063 FBXO11Q86XK2 927 aa6.42□□□□□ -1.38
CAST-242ENST00000515063 CCER1Q8TC90 406 aaPredicted RBP6.42□□□□□ -1.38
CAST-242ENST00000515063 SNX29Q8TEQ0 813 aa6.42□□□□□ -1.38
CAST-242ENST00000515063 LENG1Q96BZ8 264 aaPredicted RBP6.42□□□□□ -1.38
CAST-242ENST00000515063 TMEM63CQ9P1W3 806 aa6.42□□□□□ -1.38
CAST-242ENST00000515063 POLIQ9UNA4 740 aa6.42□□□□□ -1.38
CAST-242ENST00000515063 H3BRB1 525 aa6.41□□□□□ -1.38
CAST-242ENST00000515063 IL22RA1Q8N6P7 574 aa6.41□□□□□ -1.38
CAST-242ENST00000515063 TUT1Q9H6E5 874 aaKnown RBP6.41□□□□□ -1.38
CAST-242ENST00000515063 USP21Q9UK80 565 aa6.41□□□□□ -1.38
CAST-242ENST00000515063 NDUFB5O43674 189 aa6.4□□□□□ -1.38
CAST-242ENST00000515063 NEFLP07196 543 aa6.4□□□□□ -1.38
CAST-242ENST00000515063 CEP135Q66GS9 1140 aa6.4□□□□□ -1.38
CAST-242ENST00000515063 FAM117BQ6P1L5 589 aa6.4□□□□□ -1.38
CAST-242ENST00000515063 ILDR2Q71H61 639 aa6.4□□□□□ -1.38
CAST-242ENST00000515063 PBX4Q9BYU1 374 aa6.4□□□□□ -1.38
CAST-242ENST00000515063 ANO2Q9NQ90 1003 aa6.4□□□□□ -1.38
CAST-242ENST00000515063 BRPF3Q9ULD4 1205 aa6.4□□□□□ -1.38
CAST-242ENST00000515063 PPME1Q9Y570 386 aa6.4□□□□□ -1.38
CAST-242ENST00000515063 DCAF1Q9Y4B6 1507 aa6.4□□□□□ -1.39
CAST-242ENST00000515063 K7ELQ4 463 aaPredicted RBP6.39□□□□□ -1.39
CAST-242ENST00000515063 PHACTR2O75167 634 aa6.39□□□□□ -1.39
CAST-242ENST00000515063 EDN3P14138 238 aa6.39□□□□□ -1.39
CAST-242ENST00000515063 PTPRAP18433 802 aa6.39□□□□□ -1.39
CAST-242ENST00000515063 CDC27P30260 824 aa6.39□□□□□ -1.39
CAST-242ENST00000515063 COL13A1Q5TAT6 717 aaPredicted RBP6.39□□□□□ -1.39
CAST-242ENST00000515063 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
CAST-242ENST00000515063 TXNRD3Q86VQ6 643 aa6.39□□□□□ -1.39
CAST-242ENST00000515063 GGNBP2Q9H3C7 697 aa6.39□□□□□ -1.39
CAST-242ENST00000515063 TRIM33Q9UPN9 1127 aa6.39□□□□□ -1.39
CAST-242ENST00000515063 FZD6O60353 706 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 TNFRSF21O75509 655 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 CYP2E1P05181 493 aaPredicted RBP6.38□□□□□ -1.39
CAST-242ENST00000515063 SELPP16109 830 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 SERPINB4P48594 390 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 CABP4P57796 275 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 ATP11AP98196 1134 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 PDE3BQ13370 1112 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 ADGRE1Q14246 886 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 MBTPS1Q14703 1052 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 GJD3Q8N144 294 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 CEP120Q8N960 986 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 C1orf127Q8N9H9 656 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 RASSF4Q9H2L5 321 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 CNTN3Q9P232 1028 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 KANSL3Q9P2N6 904 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 SALL4Q9UJQ4 1053 aa6.38□□□□□ -1.39
CAST-242ENST00000515063 BRD1O95696 1058 aa6.37□□□□□ -1.39
CAST-242ENST00000515063 TXNDC2Q86VQ3 553 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms