RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 MTX1Q13505 466 aa12.61□□□□□ -0.39
NEDD9-214ENST00000513989 HSP90AB4PQ58FF6 505 aa12.61□□□□□ -0.39
NEDD9-214ENST00000513989 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
NEDD9-214ENST00000513989 CEP85Q6P2H3 762 aa12.61□□□□□ -0.39
NEDD9-214ENST00000513989 JMYQ8N9B5 988 aa12.61□□□□□ -0.39
NEDD9-214ENST00000513989 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
NEDD9-214ENST00000513989 KAZALD1Q96I82 304 aa12.61□□□□□ -0.39
NEDD9-214ENST00000513989 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
NEDD9-214ENST00000513989 MPHOSPH8Q99549 860 aa12.61□□□□□ -0.39
NEDD9-214ENST00000513989 VEGFAP15692 232 aaPredicted RBP12.6□□□□□ -0.39
NEDD9-214ENST00000513989 ITGA6P23229 1130 aa12.6□□□□□ -0.39
NEDD9-214ENST00000513989 HOXA10P31260 410 aaPredicted RBP12.6□□□□□ -0.39
NEDD9-214ENST00000513989 G3BP1Q13283 466 aaKnown RBP eCLIP12.6□□□□□ -0.39
NEDD9-214ENST00000513989 CRY2Q49AN0 593 aa12.6□□□□□ -0.39
NEDD9-214ENST00000513989 ANKRD18AQ8IVF6 992 aa12.6□□□□□ -0.39
NEDD9-214ENST00000513989 SMC1BQ8NDV3 1235 aa12.6□□□□□ -0.39
NEDD9-214ENST00000513989 CNKSR1Q969H4 720 aa12.6□□□□□ -0.39
NEDD9-214ENST00000513989 CRAMP1Q96RY5 1269 aa12.6□□□□□ -0.39
NEDD9-214ENST00000513989 GREM2Q9H772 168 aa12.6□□□□□ -0.39
NEDD9-214ENST00000513989 COL4A5P29400 1685 aa12.6□□□□□ -0.39
NEDD9-214ENST00000513989 TAF1P21675 1872 aa12.59□□□□□ -0.39
NEDD9-214ENST00000513989 ABCC12Q96J65 1359 aa12.59□□□□□ -0.39
NEDD9-214ENST00000513989 RPS8P62241 208 aaKnown RBP12.59□□□□□ -0.39
NEDD9-214ENST00000513989 OLFM4Q6UX06 510 aa12.59□□□□□ -0.39
NEDD9-214ENST00000513989 TMC4Q7Z404 712 aa12.59□□□□□ -0.39
NEDD9-214ENST00000513989 SSH3Q8TE77 659 aa12.59□□□□□ -0.39
NEDD9-214ENST00000513989 TAOK3Q9H2K8 898 aa12.59□□□□□ -0.39
NEDD9-214ENST00000513989 PPP4R2Q9NY27 417 aa12.59□□□□□ -0.39
NEDD9-214ENST00000513989 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
NEDD9-214ENST00000513989 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
NEDD9-214ENST00000513989 PCDHB15Q9Y5E8 787 aa12.59□□□□□ -0.39
NEDD9-214ENST00000513989 SURF6O75683 361 aaKnown RBP12.58□□□□□ -0.4
NEDD9-214ENST00000513989 OS9Q13438 667 aaPredicted RBP12.58□□□□□ -0.4
NEDD9-214ENST00000513989 HDAC1Q13547 482 aaPredicted RBP12.58□□□□□ -0.4
NEDD9-214ENST00000513989 GRAPQ13588 217 aa12.58□□□□□ -0.4
NEDD9-214ENST00000513989 LTBP1Q14766 1721 aa12.58□□□□□ -0.4
NEDD9-214ENST00000513989 FAM161AQ3B820 660 aa12.58□□□□□ -0.4
NEDD9-214ENST00000513989 RIC1Q4ADV7 1423 aa12.58□□□□□ -0.4
NEDD9-214ENST00000513989 LDHAL6AQ6ZMR3 332 aa12.58□□□□□ -0.4
NEDD9-214ENST00000513989 GRAPLQ8TC17 118 aaPredicted RBP12.58□□□□□ -0.4
NEDD9-214ENST00000513989 CCDC136Q96JN2 1154 aa12.58□□□□□ -0.4
NEDD9-214ENST00000513989 CNNM1Q9NRU3 951 aa12.58□□□□□ -0.4
NEDD9-214ENST00000513989 RTL9Q8NET4 1388 aa12.57□□□□□ -0.4
NEDD9-214ENST00000513989 PNMA6EA0A0J9YXQ4 647 aa12.57□□□□□ -0.4
NEDD9-214ENST00000513989 DDNO94850 711 aaPredicted RBP12.57□□□□□ -0.4
NEDD9-214ENST00000513989 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
NEDD9-214ENST00000513989 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
NEDD9-214ENST00000513989 POLA2Q14181 598 aa12.57□□□□□ -0.4
NEDD9-214ENST00000513989 C3orf67Q6ZVT6 689 aa12.57□□□□□ -0.4
NEDD9-214ENST00000513989 SLC51AQ86UW1 340 aa12.57□□□□□ -0.4
NEDD9-214ENST00000513989 COPRSQ9NQ92 184 aa12.57□□□□□ -0.4
NEDD9-214ENST00000513989 BSDC1Q9NW68 430 aaPredicted RBP12.57□□□□□ -0.4
NEDD9-214ENST00000513989 RAB11FIP3O75154 756 aa12.56□□□□□ -0.4
NEDD9-214ENST00000513989 GRIPAP1Q4V328 841 aa12.56□□□□□ -0.4
NEDD9-214ENST00000513989 ERC1Q8IUD2 1116 aa12.56□□□□□ -0.4
NEDD9-214ENST00000513989 GCC1Q96CN9 775 aa12.56□□□□□ -0.4
NEDD9-214ENST00000513989 SEC31BQ9NQW1 1179 aa12.56□□□□□ -0.4
NEDD9-214ENST00000513989 EYA2O00167 538 aa12.55□□□□□ -0.4
NEDD9-214ENST00000513989 CIAO1O76071 339 aa12.55□□□□□ -0.4
NEDD9-214ENST00000513989 IL15P40933 162 aaPredicted RBP12.55□□□□□ -0.4
NEDD9-214ENST00000513989 PTPN12Q05209 780 aaKnown RBP12.55□□□□□ -0.4
NEDD9-214ENST00000513989 CC2D2BQ6DHV5 1058 aa12.55□□□□□ -0.4
NEDD9-214ENST00000513989 SIRT2Q8IXJ6 389 aa12.55□□□□□ -0.4
NEDD9-214ENST00000513989 ANKRD2Q9GZV1 360 aa12.55□□□□□ -0.4
NEDD9-214ENST00000513989 DCTPP1Q9H773 170 aa12.55□□□□□ -0.4
NEDD9-214ENST00000513989 NOP58Q9Y2X3 529 aaKnown RBP12.55□□□□□ -0.4
NEDD9-214ENST00000513989 ZNF541Q9H0D2 1346 aa12.55□□□□□ -0.4
NEDD9-214ENST00000513989 PPEF1O14829 653 aaPredicted RBP12.54□□□□□ -0.4
NEDD9-214ENST00000513989 RFX5P48382 616 aaPredicted RBP12.54□□□□□ -0.4
NEDD9-214ENST00000513989 CCDC93Q567U6 631 aa12.54□□□□□ -0.4
NEDD9-214ENST00000513989 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
NEDD9-214ENST00000513989 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
NEDD9-214ENST00000513989 SP8Q8IXZ3 490 aa12.54□□□□□ -0.4
NEDD9-214ENST00000513989 CELF1Q92879 486 aaKnown RBP12.54□□□□□ -0.4
NEDD9-214ENST00000513989 ZNF594Q96JF6 807 aaPredicted RBP12.54□□□□□ -0.4
NEDD9-214ENST00000513989 SIL1Q9H173 461 aa12.54□□□□□ -0.4
NEDD9-214ENST00000513989 CEP126Q9P2H0 1117 aa12.54□□□□□ -0.4
NEDD9-214ENST00000513989 MROH5Q6ZUA9 1318 aa12.54□□□□□ -0.4
NEDD9-214ENST00000513989 DDX60Q8IY21 1712 aaKnown RBP12.54□□□□□ -0.4
NEDD9-214ENST00000513989 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEDD9-214ENST00000513989 METTL24Q5JXM2 366 aa12.53□□□□□ -0.4
NEDD9-214ENST00000513989 KLHDC4Q8TBB5 520 aa12.53□□□□□ -0.4
NEDD9-214ENST00000513989 L3MBTL3Q96JM7 780 aaPredicted RBP12.53□□□□□ -0.4
NEDD9-214ENST00000513989 ZNF277Q9NRM2 450 aaPredicted RBP12.53□□□□□ -0.4
NEDD9-214ENST00000513989 ANKIB1Q9P2G1 1089 aa12.53□□□□□ -0.4
NEDD9-214ENST00000513989 PA2G4Q9UQ80 394 aaKnown RBP12.53□□□□□ -0.4
NEDD9-214ENST00000513989 AKAP2Q9Y2D5 859 aa12.53□□□□□ -0.4
NEDD9-214ENST00000513989 ATP6V0A2Q9Y487 856 aa12.53□□□□□ -0.4
NEDD9-214ENST00000513989 RIPOR2Q9Y4F9 1068 aa12.53□□□□□ -0.4
NEDD9-214ENST00000513989 KCNJ4P48050 445 aa12.52□□□□□ -0.41
NEDD9-214ENST00000513989 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
NEDD9-214ENST00000513989 CENPQQ7L2Z9 268 aaPredicted RBP12.52□□□□□ -0.41
NEDD9-214ENST00000513989 KIF1BPQ96EK5 621 aa12.52□□□□□ -0.41
NEDD9-214ENST00000513989 GTF3C3Q9Y5Q9 886 aa12.52□□□□□ -0.41
NEDD9-214ENST00000513989 PASKQ96RG2 1323 aa12.52□□□□□ -0.41
NEDD9-214ENST00000513989 TRPM7Q96QT4 1865 aa12.52□□□□□ -0.41
NEDD9-214ENST00000513989 IGHDP01880 384 aa12.51□□□□□ -0.41
NEDD9-214ENST00000513989 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
NEDD9-214ENST00000513989 RTKN2Q8IZC4 609 aa12.51□□□□□ -0.41
NEDD9-214ENST00000513989 LRRCC1Q9C099 1032 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms