RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.35	□□□□□ -0.59
RACK1-222	ENST00000509535	MIS18A	Q9NYP9	233 aa		11.35	□□□□□ -0.59
RACK1-222	ENST00000509535	ECE2	O60344	883 aa		11.34	□□□□□ -0.59
RACK1-222	ENST00000509535	HCLS1	P14317	486 aa	Predicted RBP	11.34	□□□□□ -0.59
RACK1-222	ENST00000509535	EN2	P19622	333 aa	Predicted RBP	11.34	□□□□□ -0.59
RACK1-222	ENST00000509535	MKRN3	Q13064	507 aa	Known RBP	11.34	□□□□□ -0.59
RACK1-222	ENST00000509535	CNGB1	Q14028	1251 aa	Predicted RBP	11.34	□□□□□ -0.59
RACK1-222	ENST00000509535	SLC17A8	Q8NDX2	589 aa		11.34	□□□□□ -0.59
RACK1-222	ENST00000509535	CFHR5	Q9BXR6	569 aa		11.34	□□□□□ -0.59
RACK1-222	ENST00000509535	RSPH6A	Q9H0K4	717 aa		11.34	□□□□□ -0.59
RACK1-222	ENST00000509535	TRIM17	Q9Y577	477 aa		11.34	□□□□□ -0.59
RACK1-222	ENST00000509535	C6orf229	H3BNL8	230 aa		11.33	□□□□□ -0.6
RACK1-222	ENST00000509535	PPP2R1A	P30153	589 aa		11.33	□□□□□ -0.6
RACK1-222	ENST00000509535	SREBF2	Q12772	1141 aa		11.33	□□□□□ -0.6
RACK1-222	ENST00000509535	SCARF1	Q14162	830 aa		11.33	□□□□□ -0.6
RACK1-222	ENST00000509535	TAF7	Q15545	349 aa	Predicted RBP	11.33	□□□□□ -0.6
RACK1-222	ENST00000509535	DOK7	Q18PE1	504 aa		11.33	□□□□□ -0.6
RACK1-222	ENST00000509535	OTOP1	Q7RTM1	612 aa		11.33	□□□□□ -0.6
RACK1-222	ENST00000509535	TMC4	Q7Z404	712 aa		11.33	□□□□□ -0.6
RACK1-222	ENST00000509535	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.33	□□□□□ -0.6
RACK1-222	ENST00000509535	VIL1	P09327	827 aa	Known RBP	11.32	□□□□□ -0.6
RACK1-222	ENST00000509535	TTLL12	Q14166	644 aa	Predicted RBP	11.32	□□□□□ -0.6
RACK1-222	ENST00000509535	POLL	Q9UGP5	575 aa		11.32	□□□□□ -0.6
RACK1-222	ENST00000509535	SCAF8	Q9UPN6	1271 aa	Known RBP	11.32	□□□□□ -0.6
RACK1-222	ENST00000509535	COL4A1	P02462	1669 aa		11.32	□□□□□ -0.6
RACK1-222	ENST00000509535	PITPNM2	Q9BZ72	1349 aa		11.31	□□□□□ -0.6
RACK1-222	ENST00000509535	ZNF646	O15015	1829 aa	Predicted RBP	11.3	□□□□□ -0.6
RACK1-222	ENST00000509535	ZNF609	O15014	1411 aa		11.3	□□□□□ -0.6
RACK1-222	ENST00000509535	HTATSF1	O43719	755 aa	Known RBP	11.3	□□□□□ -0.6
RACK1-222	ENST00000509535	ZNF280A	P59817	542 aa	Predicted RBP	11.3	□□□□□ -0.6
RACK1-222	ENST00000509535	PRAMEF18	Q5VWM3	479 aa		11.3	□□□□□ -0.6
RACK1-222	ENST00000509535	OTUD5	Q96G74	571 aa		11.3	□□□□□ -0.6
RACK1-222	ENST00000509535	EYA3	Q99504	573 aa		11.3	□□□□□ -0.6
RACK1-222	ENST00000509535	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.3	□□□□□ -0.6
RACK1-222	ENST00000509535		H0YGN5	161 aa		11.29	□□□□□ -0.6
RACK1-222	ENST00000509535	ALDH1A1	P00352	501 aa		11.29	□□□□□ -0.6
RACK1-222	ENST00000509535	EIF4A1	P60842	406 aa	Known RBP	11.29	□□□□□ -0.6
RACK1-222	ENST00000509535	GPSM2	P81274	684 aa		11.29	□□□□□ -0.6
RACK1-222	ENST00000509535	TCIRG1	Q13488	830 aa		11.29	□□□□□ -0.6
RACK1-222	ENST00000509535	ARMC5	Q96C12	935 aa		11.29	□□□□□ -0.6
RACK1-222	ENST00000509535	THUMPD2	Q9BTF0	503 aa	Known RBP	11.29	□□□□□ -0.6
RACK1-222	ENST00000509535	TRMT112	Q9UI30	125 aa	Known RBP	11.29	□□□□□ -0.6
RACK1-222	ENST00000509535	PTPN22	Q9Y2R2	807 aa		11.29	□□□□□ -0.6
RACK1-222	ENST00000509535	ECM29	Q5VYK3	1845 aa		11.28	□□□□□ -0.6
RACK1-222	ENST00000509535	PTPN12	Q05209	780 aa	Known RBP	11.28	□□□□□ -0.6
RACK1-222	ENST00000509535	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.28	□□□□□ -0.6
RACK1-222	ENST00000509535	NLRP10	Q86W26	655 aa		11.28	□□□□□ -0.6
RACK1-222	ENST00000509535	AGBL3	Q8NEM8	1001 aa		11.28	□□□□□ -0.6
RACK1-222	ENST00000509535	CELF1	Q92879	486 aa	Known RBP	11.28	□□□□□ -0.6
RACK1-222	ENST00000509535	TMEM106C	Q9BVX2	250 aa		11.28	□□□□□ -0.6
RACK1-222	ENST00000509535	MYOZ2	Q9NPC6	264 aa		11.28	□□□□□ -0.6
RACK1-222	ENST00000509535	ERBB4	Q15303	1308 aa		11.28	□□□□□ -0.6
RACK1-222	ENST00000509535	SH3TC1	Q8TE82	1336 aa		11.28	□□□□□ -0.6
RACK1-222	ENST00000509535		G3V3G9	751 aa		11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	ANP32C	O43423	234 aa		11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	USP17L8	P0C7I0	530 aa		11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	NF2	P35240	595 aa		11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	DCAF8	Q5TAQ9	597 aa		11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	CHRDL2	Q6WN34	429 aa		11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	LRP10	Q7Z4F1	713 aa		11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	TBC1D16	Q8TBP0	767 aa		11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	CD99L2	Q8TCZ2	262 aa		11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	PNISR	Q8TF01	805 aa	Known RBP	11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	ERO1A	Q96HE7	468 aa		11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.27	□□□□□ -0.61
RACK1-222	ENST00000509535	SPEF2	Q9C093	1822 aa		11.26	□□□□□ -0.61
RACK1-222	ENST00000509535	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.26	□□□□□ -0.61
RACK1-222	ENST00000509535	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
RACK1-222	ENST00000509535	NBPF9	Q3BBW0	867 aa		11.26	□□□□□ -0.61
RACK1-222	ENST00000509535	HSP90AB3P	Q58FF7	597 aa		11.26	□□□□□ -0.61
RACK1-222	ENST00000509535	SPRYD7	Q5W111	196 aa		11.26	□□□□□ -0.61
RACK1-222	ENST00000509535	DIEXF	Q68CQ4	756 aa	Known RBP	11.26	□□□□□ -0.61
RACK1-222	ENST00000509535	IFNL1	Q8IU54	200 aa		11.26	□□□□□ -0.61
RACK1-222	ENST00000509535	ZNF428	Q96B54	188 aa		11.26	□□□□□ -0.61
RACK1-222	ENST00000509535	GML	Q99445	158 aa		11.26	□□□□□ -0.61
RACK1-222	ENST00000509535	LAMA3	Q16787	3333 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	ANXA1	P04083	346 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	PRKG1	Q13976	671 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	PDIA6	Q15084	440 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	PROSER3	Q2NL68	480 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	ARMC9	Q7Z3E5	817 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	NECTIN2	Q92692	538 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	CFAP53	Q96M91	514 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	EFCC1	Q9HA90	598 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	RBM27	Q9P2N5	1060 aa	Known RBP	11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	NUDC	Q9Y266	331 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	ZSWIM8	A7E2V4	1837 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	UNC80	Q8N2C7	3258 aa		11.25	□□□□□ -0.61
RACK1-222	ENST00000509535	MANSC4	A6NHS7	340 aa	Predicted RBP	11.24	□□□□□ -0.61
RACK1-222	ENST00000509535	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.24	□□□□□ -0.61	6e-8	■■□□□ 12.2
RACK1-222	ENST00000509535	UFL1	O94874	794 aa		11.24	□□□□□ -0.61
RACK1-222	ENST00000509535	INHBE	P58166	350 aa		11.24	□□□□□ -0.61
RACK1-222	ENST00000509535	LDLRAD1	Q5T700	205 aa		11.24	□□□□□ -0.61
RACK1-222	ENST00000509535	ZNF333	Q96JL9	665 aa		11.24	□□□□□ -0.61
RACK1-222	ENST00000509535	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.24	□□□□□ -0.61
RACK1-222	ENST00000509535	OTOF	Q9HC10	1997 aa		11.23	□□□□□ -0.61
RACK1-222	ENST00000509535	EIF2S2	P20042	333 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-222	ENST00000509535	CAP1	Q01518	475 aa		11.23	□□□□□ -0.61
RACK1-222	ENST00000509535	AIMP1	Q12904	312 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-222	ENST00000509535	SF3B3	Q15393	1217 aa	Known RBP	11.23	□□□□□ -0.61

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