RNA–Protein interactions for RNA: ENST00000507807.3

CLPTM1L-209, Transcript of CLPTM1 like, humanhuman

TSL 1 (best) BASIC

Gene CLPTM1L, Length 1,740 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-209ENST00000507807 HSP90AA1P07900 732 aaKnown RBP19.84■□□□□ 0.77
CLPTM1L-209ENST00000507807 MCM2P49736 904 aa19.84■□□□□ 0.77
CLPTM1L-209ENST00000507807 ATP2B3Q16720 1220 aa19.84■□□□□ 0.77
CLPTM1L-209ENST00000507807 UPF3BQ9BZI7 483 aaKnown RBP19.84■□□□□ 0.77
CLPTM1L-209ENST00000507807 CNNM1Q9NRU3 951 aa19.84■□□□□ 0.77
CLPTM1L-209ENST00000507807 SCN7AQ01118 1682 aa19.84■□□□□ 0.77
CLPTM1L-209ENST00000507807 IFIT1P09914 478 aaKnown RBP19.83■□□□□ 0.77
CLPTM1L-209ENST00000507807 AMIGO3Q86WK7 504 aa19.83■□□□□ 0.77
CLPTM1L-209ENST00000507807 NARFQ9UHQ1 456 aa19.83■□□□□ 0.77
CLPTM1L-209ENST00000507807 RBM8AQ9Y5S9 174 aaKnown RBP19.83■□□□□ 0.77
CLPTM1L-209ENST00000507807 LAMB2P55268 1798 aa19.83■□□□□ 0.77
CLPTM1L-209ENST00000507807 TAF5LO75529 589 aa19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 PDE8BO95263 885 aa19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 HSP90B1P14625 803 aaKnown RBP19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 PRPF40BQ6NWY9 871 aaKnown RBP19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 TTC14Q96N46 770 aa19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 BCL11BQ9C0K0 894 aaPredicted RBP19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 SEC31BQ9NQW1 1179 aa19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 ABCC12Q96J65 1359 aa19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 GNPATO15228 680 aa19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 CCDC158Q5M9N0 1113 aa19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 TMX3Q96JJ7 454 aa19.82■□□□□ 0.76
CLPTM1L-209ENST00000507807 SPEF2Q9C093 1822 aa19.81■□□□□ 0.76
CLPTM1L-209ENST00000507807 SCARF1Q14162 830 aa19.81■□□□□ 0.76
CLPTM1L-209ENST00000507807 RAB3GAP1Q15042 981 aa19.81■□□□□ 0.76
CLPTM1L-209ENST00000507807 CCDC152Q4G0S7 254 aa19.81■□□□□ 0.76
CLPTM1L-209ENST00000507807 TBC1D9BQ66K14 1250 aa19.81■□□□□ 0.76
CLPTM1L-209ENST00000507807 MROH5Q6ZUA9 1318 aa19.81■□□□□ 0.76
CLPTM1L-209ENST00000507807 FGFR2P21802 821 aa19.8■□□□□ 0.76
CLPTM1L-209ENST00000507807 TTC39AQ5SRH9 613 aa19.8■□□□□ 0.76
CLPTM1L-209ENST00000507807 USPL1Q5W0Q7 1092 aa19.8■□□□□ 0.76
CLPTM1L-209ENST00000507807 CREB3L3Q68CJ9 461 aa19.8■□□□□ 0.76
CLPTM1L-209ENST00000507807 SEC62Q99442 399 aaKnown RBP19.8■□□□□ 0.76
CLPTM1L-209ENST00000507807 SRP68Q9UHB9 627 aaKnown RBP19.8■□□□□ 0.76
CLPTM1L-209ENST00000507807 TAF1LQ8IZX4 1826 aa19.8■□□□□ 0.76
CLPTM1L-209ENST00000507807 CUL4AQ13619 759 aa19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 ADCK5Q3MIX3 580 aa19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 ERFEQ4G0M1 354 aa19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 MCMDC2Q4G0Z9 681 aa19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 GORABQ5T7V8 394 aa19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 ZNF512BQ96KM6 892 aaPredicted RBP19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 TM6SF1Q9BZW5 370 aa19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 SLC27A2O14975 620 aa19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 SLC10A5Q5PT55 438 aa19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 ZMYM1Q5SVZ6 1142 aa19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 C3orf67Q6ZVT6 689 aa19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 RTCBQ9Y3I0 505 aaKnown RBP19.79■□□□□ 0.76
CLPTM1L-209ENST00000507807 SLFNL1Q499Z3 407 aa19.78■□□□□ 0.76
CLPTM1L-209ENST00000507807 CCDC129Q6ZRS4 1044 aa19.78■□□□□ 0.76
CLPTM1L-209ENST00000507807 ZGPATQ8N5A5 531 aaKnown RBP19.78■□□□□ 0.76
CLPTM1L-209ENST00000507807 ARHGEF1Q92888 912 aaKnown RBP19.78■□□□□ 0.76
CLPTM1L-209ENST00000507807 CWC22Q9HCG8 908 aaKnown RBP19.78■□□□□ 0.76
CLPTM1L-209ENST00000507807 ZSWIM6Q9HCJ5 1215 aa19.78■□□□□ 0.76
CLPTM1L-209ENST00000507807 HELLSQ9NRZ9 838 aa19.78■□□□□ 0.76
CLPTM1L-209ENST00000507807 LRRC4BQ9NT99 713 aa19.78■□□□□ 0.76
CLPTM1L-209ENST00000507807 SF3B3Q15393 1217 aaKnown RBP19.77■□□□□ 0.76
CLPTM1L-209ENST00000507807 PUM3Q15397 648 aaKnown RBP19.77■□□□□ 0.76
CLPTM1L-209ENST00000507807 C4BP0C0L5 1744 aa19.77■□□□□ 0.76
CLPTM1L-209ENST00000507807 COL4A1P02462 1669 aa19.77■□□□□ 0.76
CLPTM1L-209ENST00000507807 RPAP1Q9BWH6 1393 aaPredicted RBP19.77■□□□□ 0.75
CLPTM1L-209ENST00000507807 RNF113AO15541 343 aaKnown RBP19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 SSFA2P28290 1259 aa19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 FKBP4Q02790 459 aaKnown RBP eCLIP19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 TSGA10IPQ3SY00 556 aa19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 HELBQ8NG08 1087 aaPredicted RBP19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 LPIN2Q92539 896 aa19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 TNPO1Q92973 898 aaKnown RBP19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 ZKSCAN1P17029 563 aaPredicted RBP19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 CASTP20810 708 aaKnown RBP19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 MCAMP43121 646 aa19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 ZAP70P43403 619 aa19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 PI16Q6UXB8 463 aa19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 BICDL1Q6ZP65 573 aa19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 FAM196AQ6ZSG2 479 aa19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 JAKMIP1Q96N16 626 aaKnown RBP19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 MPHOSPH8Q99549 860 aa19.76■□□□□ 0.75
CLPTM1L-209ENST00000507807 COL24A1Q17RW2 1714 aa19.75■□□□□ 0.75
CLPTM1L-209ENST00000507807 ZPR1O75312 459 aa19.75■□□□□ 0.75
CLPTM1L-209ENST00000507807 CPA1P15085 419 aa19.75■□□□□ 0.75
CLPTM1L-209ENST00000507807 MCM4P33991 863 aa19.75■□□□□ 0.75
CLPTM1L-209ENST00000507807 KCNJ4P48050 445 aa19.75■□□□□ 0.75
CLPTM1L-209ENST00000507807 KRT27Q7Z3Y8 459 aa19.75■□□□□ 0.75
CLPTM1L-209ENST00000507807 TAF6LQ9Y6J9 622 aa19.75■□□□□ 0.75
CLPTM1L-209ENST00000507807 CYP2E1P05181 493 aaPredicted RBP19.74■□□□□ 0.75
CLPTM1L-209ENST00000507807 ARID4AP29374 1257 aaPredicted RBP19.74■□□□□ 0.75
CLPTM1L-209ENST00000507807 AK2P54819 239 aa19.74■□□□□ 0.75
CLPTM1L-209ENST00000507807 CCDC102BQ68D86 513 aa19.74■□□□□ 0.75
CLPTM1L-209ENST00000507807 HMG20BQ9P0W2 317 aa19.74■□□□□ 0.75
CLPTM1L-209ENST00000507807 ARAP2Q8WZ64 1704 aa19.74■□□□□ 0.75
CLPTM1L-209ENST00000507807 IGHMBP2P38935 993 aaKnown RBP19.73■□□□□ 0.75
CLPTM1L-209ENST00000507807 PHKA1P46020 1223 aa19.73■□□□□ 0.75
CLPTM1L-209ENST00000507807 COL9A3Q14050 684 aaPredicted RBP19.73■□□□□ 0.75
CLPTM1L-209ENST00000507807 VPS53Q5VIR6 699 aa19.73■□□□□ 0.75
CLPTM1L-209ENST00000507807 RNF20Q5VTR2 975 aa19.73■□□□□ 0.75
CLPTM1L-209ENST00000507807 NOL8Q76FK4 1167 aaKnown RBP19.73■□□□□ 0.75
CLPTM1L-209ENST00000507807 RUFY3Q7L099 469 aa19.73■□□□□ 0.75
CLPTM1L-209ENST00000507807 INTS4Q96HW7 963 aaKnown RBP19.73■□□□□ 0.75
CLPTM1L-209ENST00000507807 SETDB2Q96T68 719 aa19.73■□□□□ 0.75
CLPTM1L-209ENST00000507807 AKAP11Q9UKA4 1901 aa19.73■□□□□ 0.75
CLPTM1L-209ENST00000507807 MAST3O60307 1309 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms