RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 GNAI2P04899 355 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 ITGA6P23229 1130 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 PDE6BP35913 854 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 ATP8B2P98198 1209 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 STYK1Q6J9G0 422 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 OLFM4Q6UX06 510 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 ATG9AQ7Z3C6 839 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 KLHDC4Q8TBB5 520 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 MASTLQ96GX5 879 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 COPRSQ9NQ92 184 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 RIPOR2Q9Y4F9 1068 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 SCN9AQ15858 1988 aa6.21□□□□□ -1.42
LMNB1-208ENST00000504788 NPR1P16066 1061 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 YBX3P16989 372 aaKnown RBP eCLIP6.2□□□□□ -1.423e-9■□□□□ 10.7
LMNB1-208ENST00000504788 IRX6P78412 446 aaPredicted RBP6.2□□□□□ -1.42
LMNB1-208ENST00000504788 GRAPQ13588 217 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 POTEGQ6S5H5 508 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 C2CD5Q86YS7 1000 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 GRAPLQ8TC17 118 aaPredicted RBP6.2□□□□□ -1.42
LMNB1-208ENST00000504788 ZNF594Q96JF6 807 aaPredicted RBP6.2□□□□□ -1.42
LMNB1-208ENST00000504788 CCDC85AQ96PX6 553 aaPredicted RBP6.2□□□□□ -1.42
LMNB1-208ENST00000504788 PUS3Q9BZE2 481 aaKnown RBP6.2□□□□□ -1.42
LMNB1-208ENST00000504788 PDZRN3Q9UPQ7 1066 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 SSUH2Q9Y2M2 353 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 NOP58Q9Y2X3 529 aaKnown RBP6.2□□□□□ -1.42
LMNB1-208ENST00000504788 AKAP11Q9UKA4 1901 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 H0YIN7 160 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 SASH1O94885 1247 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 CCDC152Q4G0S7 254 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 LRRC24Q50LG9 513 aa6.2□□□□□ -1.42
LMNB1-208ENST00000504788 PRPF40BQ6NWY9 871 aaKnown RBP6.2□□□□□ -1.42
LMNB1-208ENST00000504788 RPAP2Q8IXW5 612 aaPredicted RBP6.2□□□□□ -1.42
LMNB1-208ENST00000504788 BSDC1Q9NW68 430 aaPredicted RBP6.2□□□□□ -1.42
LMNB1-208ENST00000504788 PA2G4Q9UQ80 394 aaKnown RBP6.2□□□□□ -1.42
LMNB1-208ENST00000504788 NFKBIEO00221 500 aa6.19□□□□□ -1.42
LMNB1-208ENST00000504788 SRGAP3O43295 1099 aa6.19□□□□□ -1.42
LMNB1-208ENST00000504788 IGHDP01880 384 aa6.19□□□□□ -1.42
LMNB1-208ENST00000504788 CENPBP07199 599 aaPredicted RBP6.19□□□□□ -1.42
LMNB1-208ENST00000504788 GTF2E1P29083 439 aaPredicted RBP6.19□□□□□ -1.42
LMNB1-208ENST00000504788 RPS8P62241 208 aaKnown RBP6.19□□□□□ -1.42
LMNB1-208ENST00000504788 AAMPQ13685 434 aa6.19□□□□□ -1.42
LMNB1-208ENST00000504788 RTFDC1Q9BY42 306 aaPredicted RBP6.19□□□□□ -1.42
LMNB1-208ENST00000504788 PODXL2Q9NZ53 605 aa6.19□□□□□ -1.42
LMNB1-208ENST00000504788 PIM2Q9P1W9 311 aa6.19□□□□□ -1.42
LMNB1-208ENST00000504788 MINPP1Q9UNW1 487 aa6.19□□□□□ -1.42
LMNB1-208ENST00000504788 ATP6V0A2Q9Y487 856 aa6.19□□□□□ -1.42
LMNB1-208ENST00000504788 KDM2BQ8NHM5 1336 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 BBOX1O75936 387 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 FGFR2P21802 821 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 ALDH1B1P30837 517 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 HDAC1Q13547 482 aaPredicted RBP6.18□□□□□ -1.42
LMNB1-208ENST00000504788 SP8Q8IXZ3 490 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 TTLL6Q8N841 843 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 DCTPP1Q9H773 170 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 FBXO3Q9UK99 471 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 TIAM2Q8IVF5 1701 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 ANKRD18BA2A2Z9 1011 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 SNAP23O00161 211 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 EYA2O00167 538 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 CIAO1O76071 339 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 HSP90B1P14625 803 aaKnown RBP6.18□□□□□ -1.42
LMNB1-208ENST00000504788 IFIT5Q13325 482 aaKnown RBP6.18□□□□□ -1.42
LMNB1-208ENST00000504788 SMC5Q8IY18 1101 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 CNKSR1Q969H4 720 aa6.18□□□□□ -1.42
LMNB1-208ENST00000504788 RBM17Q96I25 401 aaKnown RBP6.18□□□□□ -1.42
LMNB1-208ENST00000504788 MYO5AQ9Y4I1 1855 aaKnown RBP6.18□□□□□ -1.42
LMNB1-208ENST00000504788 SALL3Q9BXA9 1300 aa6.17□□□□□ -1.42
LMNB1-208ENST00000504788 LTBP3Q9NS15 1303 aa6.17□□□□□ -1.42
LMNB1-208ENST00000504788 PPEF1O14829 653 aaPredicted RBP6.17□□□□□ -1.42
LMNB1-208ENST00000504788 C21orf2O43822 256 aa6.17□□□□□ -1.42
LMNB1-208ENST00000504788 GPSM2P81274 684 aa6.17□□□□□ -1.42
LMNB1-208ENST00000504788 CHRNDQ07001 517 aa6.17□□□□□ -1.42
LMNB1-208ENST00000504788 CCDC57Q2TAC2 916 aa6.17□□□□□ -1.42
LMNB1-208ENST00000504788 DDX46Q7L014 1031 aaKnown RBP6.17□□□□□ -1.42
LMNB1-208ENST00000504788 TXNRD3Q86VQ6 643 aa6.17□□□□□ -1.42
LMNB1-208ENST00000504788 RPGRQ92834 1020 aaKnown RBP6.17□□□□□ -1.42
LMNB1-208ENST00000504788 ZNF622Q969S3 477 aaKnown RBP eCLIP6.17□□□□□ -1.425e-7■□□□□ 8.2
LMNB1-208ENST00000504788 POLLQ9UGP5 575 aa6.17□□□□□ -1.42
LMNB1-208ENST00000504788 MYH13Q9UKX3 1938 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 ZNF609O15014 1411 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 PDE8BO95263 885 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 KLRK1P26718 216 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 DALRD3Q5D0E6 543 aaKnown RBP6.16□□□□□ -1.42
LMNB1-208ENST00000504788 LDHAL6AQ6ZMR3 332 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 C15orf52Q6ZUT6 534 aaKnown RBP6.16□□□□□ -1.42
LMNB1-208ENST00000504788 TMC4Q7Z404 712 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 ANKRD18AQ8IVF6 992 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 OTUD5Q96G74 571 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 CDC5LQ99459 802 aaKnown RBP6.16□□□□□ -1.42
LMNB1-208ENST00000504788 PSMD1Q99460 953 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 CHMP4BQ9H444 224 aaKnown RBP6.16□□□□□ -1.42
LMNB1-208ENST00000504788 PPP1R1BQ9UD71 204 aaPredicted RBP6.16□□□□□ -1.42
LMNB1-208ENST00000504788 WWC3Q9ULE0 1092 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 HDAC5Q9UQL6 1122 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 COL1A1P02452 1464 aaPredicted RBP6.16□□□□□ -1.42
LMNB1-208ENST00000504788 DOCK2Q92608 1830 aa6.16□□□□□ -1.42
LMNB1-208ENST00000504788 NPHP1O15259 732 aa6.15□□□□□ -1.42
LMNB1-208ENST00000504788 TAF5LO75529 589 aa6.15□□□□□ -1.42
LMNB1-208ENST00000504788 TBC1D16Q8TBP0 767 aa6.15□□□□□ -1.42
LMNB1-208ENST00000504788 BCS1LQ9Y276 419 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms