RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 SLFN5Q08AF3 891 aa32.25■■■□□ 2.75
PVT1-201ENST00000504719 GPR101Q96P66 508 aaPredicted RBP32.25■■■□□ 2.75
PVT1-201ENST00000504719 DBNDD1Q9H9R9 158 aa32.25■■■□□ 2.75
PVT1-201ENST00000504719 GPRC5DQ9NZD1 345 aa32.25■■■□□ 2.75
PVT1-201ENST00000504719 GGA1Q9UJY5 639 aa32.24■■■□□ 2.75
PVT1-201ENST00000504719 UFL1O94874 794 aa32.23■■■□□ 2.75
PVT1-201ENST00000504719 GMPSP49915 693 aaPredicted RBP32.23■■■□□ 2.75
PVT1-201ENST00000504719 USP50Q70EL3 339 aaPredicted RBP32.23■■■□□ 2.75
PVT1-201ENST00000504719 BSDC1Q9NW68 430 aaPredicted RBP32.23■■■□□ 2.75
PVT1-201ENST00000504719 CSF1RP07333 972 aa32.22■■■□□ 2.75
PVT1-201ENST00000504719 ZC3H12CQ9C0D7 883 aaKnown RBP32.22■■■□□ 2.75
PVT1-201ENST00000504719 XDHP47989 1333 aa32.22■■■□□ 2.75
PVT1-201ENST00000504719 ECE2O60344 883 aa32.21■■■□□ 2.75
PVT1-201ENST00000504719 DOK7Q18PE1 504 aa32.21■■■□□ 2.75
PVT1-201ENST00000504719 MAP1SQ66K74 1059 aaPredicted RBP32.21■■■□□ 2.75
PVT1-201ENST00000504719 CNTROBQ8N137 903 aa32.21■■■□□ 2.75
PVT1-201ENST00000504719 CDCA7LQ96GN5 454 aa32.21■■■□□ 2.75
PVT1-201ENST00000504719 CREBZFQ9NS37 354 aa32.21■■■□□ 2.75
PVT1-201ENST00000504719 ADARB2Q9NS39 739 aaKnown RBP32.21■■■□□ 2.75
PVT1-201ENST00000504719 BCL2L13Q9BXK5 485 aa32.2■■■□□ 2.75
PVT1-201ENST00000504719 MRPL50Q8N5N7 158 aaKnown RBP32.19■■■□□ 2.74
PVT1-201ENST00000504719 MINPP1Q9UNW1 487 aa32.19■■■□□ 2.74
PVT1-201ENST00000504719 SCN9AQ15858 1988 aa32.18■■■□□ 2.74
PVT1-201ENST00000504719 PSMD14O00487 310 aa32.18■■■□□ 2.74
PVT1-201ENST00000504719 ITGA6P23229 1130 aa32.18■■■□□ 2.74
PVT1-201ENST00000504719 ATP2B4P23634 1241 aa32.18■■■□□ 2.74
PVT1-201ENST00000504719 JMYQ8N9B5 988 aa32.18■■■□□ 2.74
PVT1-201ENST00000504719 IGHMBP2P38935 993 aaKnown RBP32.17■■■□□ 2.74
PVT1-201ENST00000504719 FAM161AQ3B820 660 aa32.17■■■□□ 2.74
PVT1-201ENST00000504719 KCNQ5Q9NR82 932 aa32.17■■■□□ 2.74
PVT1-201ENST00000504719 ALDH1L1O75891 902 aa32.16■■■□□ 2.74
PVT1-201ENST00000504719 HNRNPUQ00839 825 aaKnown RBP eCLIP32.16■■■□□ 2.741e-6■■■■□ 21.2
PVT1-201ENST00000504719 TRMT2AQ8IZ69 625 aaKnown RBP32.16■■■□□ 2.74
PVT1-201ENST00000504719 FOXO4P98177 505 aa32.15■■■□□ 2.74
PVT1-201ENST00000504719 SLC4A10Q6U841 1118 aa32.15■■■□□ 2.74
PVT1-201ENST00000504719 CNOT7Q9UIV1 285 aaKnown RBP32.15■■■□□ 2.74
PVT1-201ENST00000504719 ZBTB12Q9Y330 459 aaPredicted RBP32.15■■■□□ 2.74
PVT1-201ENST00000504719 GRM8O00222 908 aa32.14■■■□□ 2.74
PVT1-201ENST00000504719 DPF2Q92785 391 aa32.14■■■□□ 2.74
PVT1-201ENST00000504719 SRCIN1Q9C0H9 1055 aa32.14■■■□□ 2.74
PVT1-201ENST00000504719 G3V3G9 751 aa32.13■■■□□ 2.73
PVT1-201ENST00000504719 PSME4Q14997 1843 aa32.13■■■□□ 2.73
PVT1-201ENST00000504719 DCAF8Q5TAQ9 597 aa32.13■■■□□ 2.73
PVT1-201ENST00000504719 SSH1Q8WYL5 1049 aa32.13■■■□□ 2.73
PVT1-201ENST00000504719 TMEM88BA6NKF7 163 aa32.12■■■□□ 2.73
PVT1-201ENST00000504719 C9orf78Q9NZ63 289 aaPredicted RBP32.12■■■□□ 2.73
PVT1-201ENST00000504719 SHTN1A0MZ66 631 aa32.11■■■□□ 2.73
PVT1-201ENST00000504719 WTIPA6NIX2 430 aaPredicted RBP32.11■■■□□ 2.73
PVT1-201ENST00000504719 CCT4P50991 539 aaKnown RBP32.11■■■□□ 2.73
PVT1-201ENST00000504719 MPHOSPH8Q99549 860 aa32.11■■■□□ 2.73
PVT1-201ENST00000504719 PTPRCP08575 1304 aa32.1■■■□□ 2.73
PVT1-201ENST00000504719 ANKRD18BA2A2Z9 1011 aa32.1■■■□□ 2.73
PVT1-201ENST00000504719 H7C1D1 291 aa32.1■■■□□ 2.73
PVT1-201ENST00000504719 VIL1P09327 827 aaKnown RBP32.1■■■□□ 2.73
PVT1-201ENST00000504719 RPS12P25398 132 aaKnown RBP32.1■■■□□ 2.73
PVT1-201ENST00000504719 HIRAP54198 1017 aaPredicted RBP32.1■■■□□ 2.73
PVT1-201ENST00000504719 MICALL2Q8IY33 904 aa32.1■■■□□ 2.73
PVT1-201ENST00000504719 EPHA10Q5JZY3 1008 aa32.09■■■□□ 2.73
PVT1-201ENST00000504719 TRPM4Q8TD43 1214 aa32.09■■■□□ 2.73
PVT1-201ENST00000504719 PGAP2Q9UHJ9 254 aa32.09■■■□□ 2.73
PVT1-201ENST00000504719 TRPM7Q96QT4 1865 aa32.09■■■□□ 2.73
PVT1-201ENST00000504719 MED23Q9ULK4 1368 aa32.08■■■□□ 2.73
PVT1-201ENST00000504719 ALDH1L2Q3SY69 923 aa32.08■■■□□ 2.73
PVT1-201ENST00000504719 LEMD3Q9Y2U8 911 aa32.08■■■□□ 2.73
PVT1-201ENST00000504719 IFIT5Q13325 482 aaKnown RBP32.07■■■□□ 2.72
PVT1-201ENST00000504719 LMBR1LQ6UX01 489 aa32.07■■■□□ 2.72
PVT1-201ENST00000504719 ANKRD2Q9GZV1 360 aa32.07■■■□□ 2.72
PVT1-201ENST00000504719 MKRN1Q9UHC7 482 aaKnown RBP32.07■■■□□ 2.72
PVT1-201ENST00000504719 CHMP3Q9Y3E7 222 aa32.07■■■□□ 2.72
PVT1-201ENST00000504719 PODNQ7Z5L7 613 aa32.06■■■□□ 2.72
PVT1-201ENST00000504719 ZC3H15Q8WU90 426 aaKnown RBP32.06■■■□□ 2.72
PVT1-201ENST00000504719 FMR1Q06787 632 aaKnown RBP eCLIP32.05■■■□□ 2.72
PVT1-201ENST00000504719 A0A1B0GUL6 1792 aa32.04■■■□□ 2.72
PVT1-201ENST00000504719 UTYO14607 1347 aa32.04■■■□□ 2.72
PVT1-201ENST00000504719 CHRNDQ07001 517 aa32.04■■■□□ 2.72
PVT1-201ENST00000504719 CNTNAP1P78357 1384 aa32.04■■■□□ 2.72
PVT1-201ENST00000504719 ZNF804BA4D1E1 1349 aa32.03■■■□□ 2.72
PVT1-201ENST00000504719 ZNF609O15014 1411 aa32.03■■■□□ 2.72
PVT1-201ENST00000504719 CT47B1P0C2W7 299 aaPredicted RBP32.03■■■□□ 2.72
PVT1-201ENST00000504719 SAMD7Q7Z3H4 446 aa32.03■■■□□ 2.72
PVT1-201ENST00000504719 SUCLG2Q96I99 432 aa32.03■■■□□ 2.72
PVT1-201ENST00000504719 TRAF5O00463 557 aa32.02■■■□□ 2.72
PVT1-201ENST00000504719 NBPF7P0C2Y1 421 aaPredicted RBP32.02■■■□□ 2.72
PVT1-201ENST00000504719 RSBN1LQ6PCB5 846 aaPredicted RBP32.02■■■□□ 2.72
PVT1-201ENST00000504719 POLR2AP24928 1970 aaKnown RBP32.01■■■□□ 2.72
PVT1-201ENST00000504719 CCDC57Q2TAC2 916 aa32.01■■■□□ 2.71
PVT1-201ENST00000504719 TXNRD3Q86VQ6 643 aa32.01■■■□□ 2.71
PVT1-201ENST00000504719 AGBL3Q8NEM8 1001 aa32.01■■■□□ 2.71
PVT1-201ENST00000504719 KAZALD1Q96I82 304 aa32.01■■■□□ 2.71
PVT1-201ENST00000504719 SMC4Q9NTJ3 1288 aa32.01■■■□□ 2.71
PVT1-201ENST00000504719 USP17L3A6NCW0 530 aa32■■■□□ 2.71
PVT1-201ENST00000504719 USP17L4A6NCW7 530 aa32■■■□□ 2.71
PVT1-201ENST00000504719 TBC1D10BQ4KMP7 808 aaPredicted RBP32■■■□□ 2.71
PVT1-201ENST00000504719 USP17L1Q7RTZ2 530 aa32■■■□□ 2.71
PVT1-201ENST00000504719 COA1Q9GZY4 146 aa32■■■□□ 2.71
PVT1-201ENST00000504719 ZNF646O15015 1829 aaPredicted RBP32■■■□□ 2.71
PVT1-201ENST00000504719 EGFRP00533 1210 aa31.99■■■□□ 2.71
PVT1-201ENST00000504719 ZNF594Q96JF6 807 aaPredicted RBP31.99■■■□□ 2.71
PVT1-201ENST00000504719 GLIS2Q9BZE0 524 aaPredicted RBP31.99■■■□□ 2.71
PVT1-201ENST00000504719 RASSF10A6NK89 507 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms