RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 PLPP6Q8IY26 295 aa10.34□□□□□ -0.75
RFC1-207ENST00000504554 PTCD2Q8WV60 388 aaKnown RBP10.34□□□□□ -0.75
RFC1-207ENST00000504554 GPHNQ9NQX3 736 aaPredicted RBP10.34□□□□□ -0.75
RFC1-207ENST00000504554 RIC1Q4ADV7 1423 aa10.33□□□□□ -0.76
RFC1-207ENST00000504554 SNED1Q8TER0 1413 aa10.33□□□□□ -0.76
RFC1-207ENST00000504554 VAMP4O75379 141 aa10.33□□□□□ -0.76
RFC1-207ENST00000504554 HOXA10P31260 410 aaPredicted RBP10.33□□□□□ -0.76
RFC1-207ENST00000504554 EXOSC9Q06265 439 aaKnown RBP10.33□□□□□ -0.76
RFC1-207ENST00000504554 HSP90AB3PQ58FF7 597 aa10.33□□□□□ -0.76
RFC1-207ENST00000504554 CCDC30Q5VVM6 783 aa10.33□□□□□ -0.76
RFC1-207ENST00000504554 LMNB1P20700 586 aa10.32□□□□□ -0.76
RFC1-207ENST00000504554 DSG2Q14126 1118 aa10.32□□□□□ -0.76
RFC1-207ENST00000504554 JARID2Q92833 1246 aaPredicted RBP10.32□□□□□ -0.76
RFC1-207ENST00000504554 FAM89AQ96GI7 184 aa10.32□□□□□ -0.76
RFC1-207ENST00000504554 GPBP1L1Q9HC44 474 aaPredicted RBP10.32□□□□□ -0.76
RFC1-207ENST00000504554 NMRK2Q9NPI5 230 aa10.32□□□□□ -0.76
RFC1-207ENST00000504554 TRMT112Q9UI30 125 aaKnown RBP10.32□□□□□ -0.76
RFC1-207ENST00000504554 COL4A1P02462 1669 aa10.31□□□□□ -0.76
RFC1-207ENST00000504554 PDE4AP27815 886 aa10.31□□□□□ -0.76
RFC1-207ENST00000504554 C1QTNF8P60827 252 aa10.31□□□□□ -0.76
RFC1-207ENST00000504554 TRIM28Q13263 835 aaKnown RBP10.31□□□□□ -0.76
RFC1-207ENST00000504554 E2F4Q16254 413 aa10.31□□□□□ -0.76
RFC1-207ENST00000504554 RTL5Q5HYW3 569 aaPredicted RBP10.31□□□□□ -0.76
RFC1-207ENST00000504554 RIC3Q7Z5B4 369 aa10.31□□□□□ -0.76
RFC1-207ENST00000504554 MYD88Q99836 296 aa10.31□□□□□ -0.76
RFC1-207ENST00000504554 ABCC4O15439 1325 aa10.31□□□□□ -0.76
RFC1-207ENST00000504554 LTBP3Q9NS15 1303 aa10.31□□□□□ -0.76
RFC1-207ENST00000504554 ANKRD36CQ5JPF3 1778 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 PI4KAP2A4QPH2 592 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 CCER2I3L3R5 266 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 IGKV5-2P06315 115 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 ALDH1B1P30837 517 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 MFSD10Q14728 455 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 CCDC93Q567U6 631 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 PI4KAP1Q8N8J0 262 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 NLRP3Q96P20 1036 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 CRAMP1Q96RY5 1269 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 METTL22Q9BUU2 404 aaPredicted RBP10.3□□□□□ -0.76
RFC1-207ENST00000504554 TAOK3Q9H2K8 898 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 ZNF277Q9NRM2 450 aaPredicted RBP10.3□□□□□ -0.76
RFC1-207ENST00000504554 MAP3K2Q9Y2U5 619 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 SH3TC1Q8TE82 1336 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 SBF1O95248 1867 aa10.3□□□□□ -0.76
RFC1-207ENST00000504554 ARFGEF2Q9Y6D5 1785 aa10.29□□□□□ -0.76
RFC1-207ENST00000504554 KSR2Q6VAB6 950 aa10.29□□□□□ -0.76
RFC1-207ENST00000504554 RPGRQ92834 1020 aaKnown RBP10.29□□□□□ -0.76
RFC1-207ENST00000504554 CDCA7LQ96GN5 454 aa10.29□□□□□ -0.76
RFC1-207ENST00000504554 RBM17Q96I25 401 aaKnown RBP10.29□□□□□ -0.76
RFC1-207ENST00000504554 CRISPLD2Q9H0B8 497 aa10.29□□□□□ -0.76
RFC1-207ENST00000504554 CACNA1SQ13698 1873 aa10.29□□□□□ -0.76
RFC1-207ENST00000504554 FER1L6Q2WGJ9 1857 aa10.29□□□□□ -0.76
RFC1-207ENST00000504554 RNF123Q5XPI4 1314 aa10.29□□□□□ -0.76
RFC1-207ENST00000504554 COL4A5P29400 1685 aa10.28□□□□□ -0.76
RFC1-207ENST00000504554 POTECB2RU33 542 aa10.28□□□□□ -0.76
RFC1-207ENST00000504554 PPEF1O14829 653 aaPredicted RBP10.28□□□□□ -0.76
RFC1-207ENST00000504554 FKBP4Q02790 459 aaKnown RBP eCLIP10.28□□□□□ -0.76
RFC1-207ENST00000504554 FLIIQ13045 1269 aa10.28□□□□□ -0.76
RFC1-207ENST00000504554 CWF19L2Q2TBE0 894 aaKnown RBP10.28□□□□□ -0.76
RFC1-207ENST00000504554 SOGA3Q5TF21 947 aa10.28□□□□□ -0.76
RFC1-207ENST00000504554 RRAGCQ9HB90 399 aa10.28□□□□□ -0.76
RFC1-207ENST00000504554 GLTPD2A6NH11 291 aa10.27□□□□□ -0.77
RFC1-207ENST00000504554 IRS4O14654 1257 aaPredicted RBP10.27□□□□□ -0.77
RFC1-207ENST00000504554 SLFN5Q08AF3 891 aa10.27□□□□□ -0.77
RFC1-207ENST00000504554 SF3B3Q15393 1217 aaKnown RBP10.27□□□□□ -0.77
RFC1-207ENST00000504554 DIEXFQ68CQ4 756 aaKnown RBP10.27□□□□□ -0.77
RFC1-207ENST00000504554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
RFC1-207ENST00000504554 RTKN2Q8IZC4 609 aa10.27□□□□□ -0.77
RFC1-207ENST00000504554 ZBTB38Q8NAP3 1195 aaPredicted RBP10.27□□□□□ -0.77
RFC1-207ENST00000504554 CCDC191Q8NCU4 936 aa10.27□□□□□ -0.77
RFC1-207ENST00000504554 CELF1Q92879 486 aaKnown RBP10.27□□□□□ -0.77
RFC1-207ENST00000504554 STK31Q9BXU1 1019 aa10.27□□□□□ -0.77
RFC1-207ENST00000504554 MYH16Q9H6N6 1097 aa10.27□□□□□ -0.77
RFC1-207ENST00000504554 ARIH1Q9Y4X5 557 aaPredicted RBP10.27□□□□□ -0.77
RFC1-207ENST00000504554 DDX60Q8IY21 1712 aaKnown RBP10.27□□□□□ -0.77
RFC1-207ENST00000504554 F6X3S4 739 aa10.26□□□□□ -0.77
RFC1-207ENST00000504554 ARHGAP33O14559 1287 aa10.26□□□□□ -0.77
RFC1-207ENST00000504554 DDX58O95786 925 aaKnown RBP10.26□□□□□ -0.77
RFC1-207ENST00000504554 PCCAP05165 728 aaPredicted RBP10.26□□□□□ -0.77
RFC1-207ENST00000504554 GRAPQ13588 217 aa10.26□□□□□ -0.77
RFC1-207ENST00000504554 GRAPLQ8TC17 118 aaPredicted RBP10.26□□□□□ -0.77
RFC1-207ENST00000504554 PSMD1Q99460 953 aa10.26□□□□□ -0.77
RFC1-207ENST00000504554 SEC31BQ9NQW1 1179 aa10.26□□□□□ -0.77
RFC1-207ENST00000504554 CWC25Q9NXE8 425 aaPredicted RBP10.26□□□□□ -0.77
RFC1-207ENST00000504554 ATP6V0A2Q9Y487 856 aa10.26□□□□□ -0.77
RFC1-207ENST00000504554 ZNF541Q9H0D2 1346 aa10.26□□□□□ -0.77
RFC1-207ENST00000504554 ZC3H4Q9UPT8 1303 aaKnown RBP10.26□□□□□ -0.77
RFC1-207ENST00000504554 LAMB2P55268 1798 aa10.26□□□□□ -0.77
RFC1-207ENST00000504554 TIAM2Q8IVF5 1701 aa10.25□□□□□ -0.77
RFC1-207ENST00000504554 NEURL1BA8MQ27 555 aa10.25□□□□□ -0.77
RFC1-207ENST00000504554 DDNO94850 711 aaPredicted RBP10.25□□□□□ -0.77
RFC1-207ENST00000504554 IARSP41252 1262 aaKnown RBP10.25□□□□□ -0.77
RFC1-207ENST00000504554 DDX46Q7L014 1031 aaKnown RBP10.25□□□□□ -0.77
RFC1-207ENST00000504554 TRMT2AQ8IZ69 625 aaKnown RBP10.25□□□□□ -0.77
RFC1-207ENST00000504554 CCDC85AQ96PX6 553 aaPredicted RBP10.25□□□□□ -0.77
RFC1-207ENST00000504554 E9PSI1 815 aa10.24□□□□□ -0.77
RFC1-207ENST00000504554 BBOX1O75936 387 aa10.24□□□□□ -0.77
RFC1-207ENST00000504554 CASP7P55210 303 aa10.24□□□□□ -0.77
RFC1-207ENST00000504554 FKBP5Q13451 457 aaPredicted RBP10.24□□□□□ -0.77
RFC1-207ENST00000504554 ADGRD1Q6QNK2 874 aa10.24□□□□□ -0.77
RFC1-207ENST00000504554 SP8Q8IXZ3 490 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms