RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 GPTP24298 496 aa12□□□□□ -0.49
DHFR-202ENST00000504396 FOSBP53539 338 aa12□□□□□ -0.49
DHFR-202ENST00000504396 LSM11P83369 360 aaKnown RBP eCLIP12□□□□□ -0.49
DHFR-202ENST00000504396 MAP2K1Q02750 393 aaPredicted RBP12□□□□□ -0.49
DHFR-202ENST00000504396 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
DHFR-202ENST00000504396 PSMD1Q99460 953 aa12□□□□□ -0.49
DHFR-202ENST00000504396 TMX4Q9H1E5 349 aaPredicted RBP12□□□□□ -0.49
DHFR-202ENST00000504396 RRP7AQ9Y3A4 280 aaKnown RBP12□□□□□ -0.49
DHFR-202ENST00000504396 NUP98P52948 1817 aa12□□□□□ -0.49
DHFR-202ENST00000504396 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
DHFR-202ENST00000504396 HSPA8P11142 646 aaKnown RBP11.99□□□□□ -0.49
DHFR-202ENST00000504396 MYL6BP14649 208 aa11.99□□□□□ -0.49
DHFR-202ENST00000504396 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
DHFR-202ENST00000504396 NIM1KQ8IY84 436 aa11.99□□□□□ -0.49
DHFR-202ENST00000504396 ZBTB3Q9H5J0 574 aa11.99□□□□□ -0.49
DHFR-202ENST00000504396 DDX21Q9NR30 783 aaKnown RBP eCLIP11.99□□□□□ -0.49
DHFR-202ENST00000504396 ARHGAP33O14559 1287 aa11.98□□□□□ -0.49
DHFR-202ENST00000504396 PPP2R1AP30153 589 aa11.98□□□□□ -0.49
DHFR-202ENST00000504396 MMRN1Q13201 1228 aa11.98□□□□□ -0.49
DHFR-202ENST00000504396 GRIPAP1Q4V328 841 aa11.98□□□□□ -0.49
DHFR-202ENST00000504396 CC2D2BQ6DHV5 1058 aa11.98□□□□□ -0.49
DHFR-202ENST00000504396 RBM17Q96I25 401 aaKnown RBP11.98□□□□□ -0.49
DHFR-202ENST00000504396 COL4A5P29400 1685 aa11.98□□□□□ -0.49
DHFR-202ENST00000504396 LTBP1Q14766 1721 aa11.98□□□□□ -0.49
DHFR-202ENST00000504396 RIC1Q4ADV7 1423 aa11.98□□□□□ -0.49
DHFR-202ENST00000504396 MAP3K15Q6ZN16 1313 aa11.98□□□□□ -0.49
DHFR-202ENST00000504396 KDM3BQ7LBC6 1761 aa11.97□□□□□ -0.49
DHFR-202ENST00000504396 PPIP5K2O43314 1243 aa11.97□□□□□ -0.49
DHFR-202ENST00000504396 ECE1P42892 770 aa11.97□□□□□ -0.49
DHFR-202ENST00000504396 PSEN2P49810 448 aa11.97□□□□□ -0.49
DHFR-202ENST00000504396 FMR1Q06787 632 aaKnown RBP eCLIP11.97□□□□□ -0.49
DHFR-202ENST00000504396 CRY2Q49AN0 593 aa11.97□□□□□ -0.49
DHFR-202ENST00000504396 PNISRQ8TF01 805 aaKnown RBP11.97□□□□□ -0.49
DHFR-202ENST00000504396 ABHD8Q96I13 439 aa11.97□□□□□ -0.49
DHFR-202ENST00000504396 CAPNS2Q96L46 248 aa11.97□□□□□ -0.49
DHFR-202ENST00000504396 DLG5Q8TDM6 1919 aa11.97□□□□□ -0.49
DHFR-202ENST00000504396 IBTKQ9P2D0 1353 aaPredicted RBP11.96□□□□□ -0.49
DHFR-202ENST00000504396 CCDC85CA6NKD9 419 aa11.96□□□□□ -0.49
DHFR-202ENST00000504396 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
DHFR-202ENST00000504396 EPS15P42566 896 aa11.96□□□□□ -0.49
DHFR-202ENST00000504396 SCNN1DP51172 638 aa11.96□□□□□ -0.49
DHFR-202ENST00000504396 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
DHFR-202ENST00000504396 CYP4F22Q6NT55 531 aa11.96□□□□□ -0.49
DHFR-202ENST00000504396 TTLL7Q6ZT98 887 aa11.96□□□□□ -0.49
DHFR-202ENST00000504396 TRPM7Q96QT4 1865 aa11.96□□□□□ -0.49
DHFR-202ENST00000504396 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.5
DHFR-202ENST00000504396 TRAF5O00463 557 aa11.95□□□□□ -0.5
DHFR-202ENST00000504396 AOC3Q16853 763 aa11.95□□□□□ -0.5
DHFR-202ENST00000504396 SUSD4Q5VX71 490 aa11.95□□□□□ -0.5
DHFR-202ENST00000504396 SLC51AQ86UW1 340 aa11.95□□□□□ -0.5
DHFR-202ENST00000504396 GPR101Q96P66 508 aaPredicted RBP11.95□□□□□ -0.5
DHFR-202ENST00000504396 TSKSQ9UJT2 592 aa11.95□□□□□ -0.5
DHFR-202ENST00000504396 SNED1Q8TER0 1413 aa11.95□□□□□ -0.5
DHFR-202ENST00000504396 THSD7BQ9C0I4 1608 aa11.95□□□□□ -0.5
DHFR-202ENST00000504396 USP50Q70EL3 339 aaPredicted RBP11.94□□□□□ -0.5
DHFR-202ENST00000504396 PPP1R42Q7Z4L9 355 aa11.94□□□□□ -0.5
DHFR-202ENST00000504396 KCNK17Q96T54 332 aa11.94□□□□□ -0.5
DHFR-202ENST00000504396 ZNF408Q9H9D4 720 aa11.94□□□□□ -0.5
DHFR-202ENST00000504396 HOXA10P31260 410 aaPredicted RBP11.94□□□□□ -0.5
DHFR-202ENST00000504396 DMRTA1Q5VZB9 504 aa11.94□□□□□ -0.5
DHFR-202ENST00000504396 NLRP3Q96P20 1036 aa11.94□□□□□ -0.5
DHFR-202ENST00000504396 CRAMP1Q96RY5 1269 aa11.94□□□□□ -0.5
DHFR-202ENST00000504396 THUMPD2Q9BTF0 503 aaKnown RBP11.94□□□□□ -0.5
DHFR-202ENST00000504396 PCDHGA10Q9Y5H3 936 aa11.94□□□□□ -0.5
DHFR-202ENST00000504396 MAPK8IP3Q9UPT6 1336 aa11.93□□□□□ -0.5
DHFR-202ENST00000504396 AOC2O75106 756 aa11.93□□□□□ -0.5
DHFR-202ENST00000504396 NTSR2O95665 410 aa11.93□□□□□ -0.5
DHFR-202ENST00000504396 EIF4A1P60842 406 aaKnown RBP11.93□□□□□ -0.5
DHFR-202ENST00000504396 ZDHHC16Q969W1 377 aa11.93□□□□□ -0.5
DHFR-202ENST00000504396 BCL2L13Q9BXK5 485 aa11.93□□□□□ -0.5
DHFR-202ENST00000504396 ADARB2Q9NS39 739 aaKnown RBP11.93□□□□□ -0.5
DHFR-202ENST00000504396 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
DHFR-202ENST00000504396 CELF2O95319 508 aaKnown RBP11.92□□□□□ -0.5
DHFR-202ENST00000504396 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
DHFR-202ENST00000504396 PDIA6Q15084 440 aa11.92□□□□□ -0.5
DHFR-202ENST00000504396 SUPT20HQ8NEM7 779 aa11.92□□□□□ -0.5
DHFR-202ENST00000504396 ADAM33Q9BZ11 813 aa11.92□□□□□ -0.5
DHFR-202ENST00000504396 GPRC5DQ9NZD1 345 aa11.92□□□□□ -0.5
DHFR-202ENST00000504396 TLL2Q9Y6L7 1015 aa11.92□□□□□ -0.5
DHFR-202ENST00000504396 GMPSP49915 693 aaPredicted RBP11.91□□□□□ -0.5
DHFR-202ENST00000504396 PARP10Q53GL7 1025 aa11.91□□□□□ -0.5
DHFR-202ENST00000504396 CST9Q5W186 159 aa11.91□□□□□ -0.5
DHFR-202ENST00000504396 DPP8Q6V1X1 898 aaPredicted RBP11.91□□□□□ -0.5
DHFR-202ENST00000504396 GIGYF2Q6Y7W6 1299 aaKnown RBP11.91□□□□□ -0.5
DHFR-202ENST00000504396 ZNF34Q8IZ26 560 aa11.91□□□□□ -0.5
DHFR-202ENST00000504396 UTP14AQ9BVJ6 771 aaKnown RBP11.91□□□□□ -0.5
DHFR-202ENST00000504396 VPS33BQ9H267 617 aa11.91□□□□□ -0.5
DHFR-202ENST00000504396 PNNQ9H307 717 aaKnown RBP11.91□□□□□ -0.5
DHFR-202ENST00000504396 TSPYL4Q9UJ04 414 aa11.91□□□□□ -0.5
DHFR-202ENST00000504396 ATP6V0A2Q9Y487 856 aa11.91□□□□□ -0.5
DHFR-202ENST00000504396 ABCC4O15439 1325 aa11.91□□□□□ -0.5
DHFR-202ENST00000504396 MLLT1Q03111 559 aaPredicted RBP11.9□□□□□ -0.5
DHFR-202ENST00000504396 NFE2L2Q16236 605 aa11.9□□□□□ -0.5
DHFR-202ENST00000504396 DDX12PQ92771 950 aa11.9□□□□□ -0.5
DHFR-202ENST00000504396 GLIS2Q9BZE0 524 aaPredicted RBP11.9□□□□□ -0.5
DHFR-202ENST00000504396 ZNRF3Q9ULT6 936 aa11.9□□□□□ -0.5
DHFR-202ENST00000504396 LAMB2P55268 1798 aa11.9□□□□□ -0.51
DHFR-202ENST00000504396 RAD17O75943 681 aa11.89□□□□□ -0.51
DHFR-202ENST00000504396 ANXA1P04083 346 aa11.89□□□□□ -0.51
DHFR-202ENST00000504396 CXCL9Q07325 125 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms