RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 PLEKHG4BQ96PX9 1271 aa13.21□□□□□ -0.29
MACF1-225ENST00000497807 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
MACF1-225ENST00000497807 SHTN1A0MZ66 631 aa13.21□□□□□ -0.3
MACF1-225ENST00000497807 HDLBPQ00341 1268 aaKnown RBP13.21□□□□□ -0.3
MACF1-225ENST00000497807 TNS3Q68CZ2 1445 aa13.21□□□□□ -0.3
MACF1-225ENST00000497807 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.3
MACF1-225ENST00000497807 SRLQ86TD4 932 aa13.21□□□□□ -0.3
MACF1-225ENST00000497807 STAG2Q8N3U4 1231 aa13.21□□□□□ -0.3
MACF1-225ENST00000497807 ZC3H15Q8WU90 426 aaKnown RBP13.21□□□□□ -0.3
MACF1-225ENST00000497807 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.3
MACF1-225ENST00000497807 YIPF2Q9BWQ6 316 aa13.21□□□□□ -0.3
MACF1-225ENST00000497807 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.21□□□□□ -0.3
MACF1-225ENST00000497807 MYOM1P52179 1685 aa13.21□□□□□ -0.3
MACF1-225ENST00000497807 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.3
MACF1-225ENST00000497807 HHATQ5VTY9 493 aa13.2□□□□□ -0.3
MACF1-225ENST00000497807 LEKR1Q6ZMV7 388 aa13.2□□□□□ -0.3
MACF1-225ENST00000497807 TTC30AQ86WT1 665 aa13.2□□□□□ -0.3
MACF1-225ENST00000497807 SMC5Q8IY18 1101 aa13.2□□□□□ -0.3
MACF1-225ENST00000497807 GNL3LQ9NVN8 582 aaKnown RBP13.2□□□□□ -0.3
MACF1-225ENST00000497807 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
MACF1-225ENST00000497807 ARHGEF10O15013 1369 aa13.2□□□□□ -0.3
MACF1-225ENST00000497807 NBPF7P0C2Y1 421 aaPredicted RBP13.2□□□□□ -0.3
MACF1-225ENST00000497807 RBBP5Q15291 538 aaKnown RBP13.2□□□□□ -0.3
MACF1-225ENST00000497807 FILIP1LQ4L180 1135 aa13.2□□□□□ -0.3
MACF1-225ENST00000497807 TTC30BQ8N4P2 665 aa13.2□□□□□ -0.3
MACF1-225ENST00000497807 GCP02774 474 aa13.19□□□□□ -0.3
MACF1-225ENST00000497807 CCDC175P0C221 793 aa13.19□□□□□ -0.3
MACF1-225ENST00000497807 ZC3H6P61129 1189 aaKnown RBP13.19□□□□□ -0.3
MACF1-225ENST00000497807 CDC37L1Q7L3B6 337 aa13.19□□□□□ -0.3
MACF1-225ENST00000497807 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
MACF1-225ENST00000497807 ZNF483Q8TF39 744 aaPredicted RBP13.19□□□□□ -0.3
MACF1-225ENST00000497807 AHDC1Q5TGY3 1603 aaPredicted RBP13.19□□□□□ -0.3
MACF1-225ENST00000497807 RAB11FIP3O75154 756 aa13.19□□□□□ -0.3
MACF1-225ENST00000497807 NEBLO76041 1014 aa13.19□□□□□ -0.3
MACF1-225ENST00000497807 ADAMTS2O95450 1211 aa13.19□□□□□ -0.3
MACF1-225ENST00000497807 RBM6P78332 1123 aaKnown RBP13.19□□□□□ -0.3
MACF1-225ENST00000497807 SKOR2Q2VWA4 1001 aaPredicted RBP13.19□□□□□ -0.3
MACF1-225ENST00000497807 AMOTL1Q8IY63 956 aa13.19□□□□□ -0.3
MACF1-225ENST00000497807 PRPF38AQ8NAV1 312 aaKnown RBP13.19□□□□□ -0.3
MACF1-225ENST00000497807 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
MACF1-225ENST00000497807 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
MACF1-225ENST00000497807 JCADQ9P266 1359 aa13.18□□□□□ -0.3
MACF1-225ENST00000497807 NPC1L1Q9UHC9 1359 aa13.18□□□□□ -0.3
MACF1-225ENST00000497807 CCDC186Q7Z3E2 898 aa13.18□□□□□ -0.3
MACF1-225ENST00000497807 RABL2BQ9UNT1 228 aa13.18□□□□□ -0.3
MACF1-225ENST00000497807 VCAM1P19320 739 aa13.18□□□□□ -0.3
MACF1-225ENST00000497807 ZNF394Q53GI3 561 aa13.18□□□□□ -0.3
MACF1-225ENST00000497807 KIF18AQ8NI77 898 aa13.18□□□□□ -0.3
MACF1-225ENST00000497807 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
MACF1-225ENST00000497807 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
MACF1-225ENST00000497807 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
MACF1-225ENST00000497807 SPATS2LQ9NUQ6 558 aaKnown RBP13.18□□□□□ -0.3
MACF1-225ENST00000497807 PHLPP1O60346 1717 aa13.18□□□□□ -0.3
MACF1-225ENST00000497807 PNPLA6Q8IY17 1366 aa13.18□□□□□ -0.3
MACF1-225ENST00000497807 HTATSF1O43719 755 aaKnown RBP13.17□□□□□ -0.3
MACF1-225ENST00000497807 FCHSD2O94868 740 aa13.17□□□□□ -0.3
MACF1-225ENST00000497807 IRF5Q13568 498 aa13.17□□□□□ -0.3
MACF1-225ENST00000497807 GPT2Q8TD30 523 aa13.17□□□□□ -0.3
MACF1-225ENST00000497807 COMMD10Q9Y6G5 202 aa13.17□□□□□ -0.3
MACF1-225ENST00000497807 NHSL1Q5SYE7 1610 aa13.17□□□□□ -0.3
MACF1-225ENST00000497807 KCNA2P16389 499 aa13.17□□□□□ -0.3
MACF1-225ENST00000497807 CHMLP26374 656 aa13.17□□□□□ -0.3
MACF1-225ENST00000497807 TBC1D10BQ4KMP7 808 aaPredicted RBP13.17□□□□□ -0.3
MACF1-225ENST00000497807 BICD1Q96G01 975 aa13.17□□□□□ -0.3
MACF1-225ENST00000497807 CCDC34Q96HJ3 373 aa13.17□□□□□ -0.3
MACF1-225ENST00000497807 CFAP69A5D8W1 941 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 ZSCAN9O15535 394 aaPredicted RBP13.16□□□□□ -0.3
MACF1-225ENST00000497807 TAF4BQ92750 862 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 DIAPH3Q9NSV4 1193 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 TPPPO94811 219 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 XBP1P17861 261 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 STIP1P31948 543 aaKnown RBP13.16□□□□□ -0.3
MACF1-225ENST00000497807 PRPHP41219 470 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 CCDC70Q6NSX1 233 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 KCNH5Q8NCM2 988 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 SNUPNO95149 360 aaKnown RBP13.16□□□□□ -0.3
MACF1-225ENST00000497807 CPP00450 1065 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 CSB-PGBD3P0DP91 1061 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 RRS1Q15050 365 aaKnown RBP13.16□□□□□ -0.3
MACF1-225ENST00000497807 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
MACF1-225ENST00000497807 SYAP1Q96A49 352 aaPredicted RBP13.16□□□□□ -0.3
MACF1-225ENST00000497807 AKAP12Q02952 1782 aa13.15□□□□□ -0.3
MACF1-225ENST00000497807 SLC27A2O14975 620 aa13.15□□□□□ -0.3
MACF1-225ENST00000497807 HMMRO75330 724 aa13.15□□□□□ -0.3
MACF1-225ENST00000497807 TRIM42Q8IWZ5 723 aa13.15□□□□□ -0.3
MACF1-225ENST00000497807 PPM1EQ8WY54 764 aa13.15□□□□□ -0.3
MACF1-225ENST00000497807 CLUAP1Q96AJ1 413 aa13.15□□□□□ -0.3
MACF1-225ENST00000497807 RMDN2Q96LZ7 410 aa13.15□□□□□ -0.3
MACF1-225ENST00000497807 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
MACF1-225ENST00000497807 COL16A1Q07092 1604 aaPredicted RBP13.15□□□□□ -0.3
MACF1-225ENST00000497807 USP31Q70CQ4 1352 aa13.15□□□□□ -0.3
MACF1-225ENST00000497807 FOSBP53539 338 aa13.15□□□□□ -0.31
MACF1-225ENST00000497807 SLC7A5Q01650 507 aa13.15□□□□□ -0.31
MACF1-225ENST00000497807 TRIM7Q9C029 511 aa13.15□□□□□ -0.31
MACF1-225ENST00000497807 UNC45AQ9H3U1 944 aa13.15□□□□□ -0.31
MACF1-225ENST00000497807 RRP15Q9Y3B9 282 aaKnown RBP13.15□□□□□ -0.31
MACF1-225ENST00000497807 SGSM2O43147 1006 aa13.14□□□□□ -0.31
MACF1-225ENST00000497807 CHRNA2Q15822 529 aa13.14□□□□□ -0.31
MACF1-225ENST00000497807 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms