RNA–Protein interactions for RNA: ENST00000496703.1

ITGB5-210, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-210ENST00000496703 GJA3Q9Y6H8 435 aa20.48■□□□□ 0.87
ITGB5-210ENST00000496703 RARSP54136 660 aaKnown RBP20.47■□□□□ 0.87
ITGB5-210ENST00000496703 WASHC4Q2M389 1173 aa20.47■□□□□ 0.87
ITGB5-210ENST00000496703 TAF1DQ9H5J8 278 aaPredicted RBP20.47■□□□□ 0.87
ITGB5-210ENST00000496703 BSDC1Q9NW68 430 aaPredicted RBP20.47■□□□□ 0.87
ITGB5-210ENST00000496703 ANKIB1Q9P2G1 1089 aa20.47■□□□□ 0.87
ITGB5-210ENST00000496703 MINPP1Q9UNW1 487 aa20.47■□□□□ 0.87
ITGB5-210ENST00000496703 PCNTO95613 3336 aa20.47■□□□□ 0.87
ITGB5-210ENST00000496703 SCNN1DP51172 638 aa20.46■□□□□ 0.87
ITGB5-210ENST00000496703 SUCLG2Q96I99 432 aa20.46■□□□□ 0.87
ITGB5-210ENST00000496703 DBNDD1Q9H9R9 158 aa20.46■□□□□ 0.87
ITGB5-210ENST00000496703 C9orf78Q9NZ63 289 aaPredicted RBP20.46■□□□□ 0.87
ITGB5-210ENST00000496703 NOB1Q9ULX3 412 aaKnown RBP20.46■□□□□ 0.87
ITGB5-210ENST00000496703 UTYO14607 1347 aa20.46■□□□□ 0.87
ITGB5-210ENST00000496703 UFL1O94874 794 aa20.45■□□□□ 0.86
ITGB5-210ENST00000496703 BRPF1P55201 1214 aaPredicted RBP20.45■□□□□ 0.86
ITGB5-210ENST00000496703 SMC1BQ8NDV3 1235 aa20.45■□□□□ 0.86
ITGB5-210ENST00000496703 KCNQ5Q9NR82 932 aa20.45■□□□□ 0.86
ITGB5-210ENST00000496703 HACL1Q9UJ83 578 aa20.45■□□□□ 0.86
ITGB5-210ENST00000496703 ZNF646O15015 1829 aaPredicted RBP20.45■□□□□ 0.86
ITGB5-210ENST00000496703 IQCA1LA6NCM1 817 aa20.44■□□□□ 0.86
ITGB5-210ENST00000496703 RAD17O75943 681 aa20.44■□□□□ 0.86
ITGB5-210ENST00000496703 FSTL1Q12841 308 aa20.44■□□□□ 0.86
ITGB5-210ENST00000496703 DOK7Q18PE1 504 aa20.44■□□□□ 0.86
ITGB5-210ENST00000496703 LMBR1LQ6UX01 489 aa20.44■□□□□ 0.86
ITGB5-210ENST00000496703 GGA1Q9UJY5 639 aa20.44■□□□□ 0.86
ITGB5-210ENST00000496703 POLR2AP24928 1970 aaKnown RBP20.44■□□□□ 0.86
ITGB5-210ENST00000496703 XDHP47989 1333 aa20.44■□□□□ 0.86
ITGB5-210ENST00000496703 EPS15P42566 896 aa20.43■□□□□ 0.86
ITGB5-210ENST00000496703 ECE2O60344 883 aa20.42■□□□□ 0.86
ITGB5-210ENST00000496703 EPHX2P34913 555 aa20.42■□□□□ 0.86
ITGB5-210ENST00000496703 IGHMBP2P38935 993 aaKnown RBP20.42■□□□□ 0.86
ITGB5-210ENST00000496703 CIAPIN1Q6FI81 312 aa20.42■□□□□ 0.86
ITGB5-210ENST00000496703 ZNF594Q96JF6 807 aaPredicted RBP20.42■□□□□ 0.86
ITGB5-210ENST00000496703 EYA3Q99504 573 aa20.42■□□□□ 0.86
ITGB5-210ENST00000496703 USP44Q9H0E7 712 aa20.42■□□□□ 0.86
ITGB5-210ENST00000496703 CHMP3Q9Y3E7 222 aa20.42■□□□□ 0.86
ITGB5-210ENST00000496703 ANKRD18BA2A2Z9 1011 aa20.41■□□□□ 0.86
ITGB5-210ENST00000496703 ZBED9Q6R2W3 1325 aa20.41■□□□□ 0.86
ITGB5-210ENST00000496703 SHTN1A0MZ66 631 aa20.4■□□□□ 0.86
ITGB5-210ENST00000496703 BCAR3O75815 825 aa20.4■□□□□ 0.86
ITGB5-210ENST00000496703 ATP2B4P23634 1241 aa20.4■□□□□ 0.86
ITGB5-210ENST00000496703 GMPSP49915 693 aaPredicted RBP20.4■□□□□ 0.86
ITGB5-210ENST00000496703 CCT4P50991 539 aaKnown RBP20.4■□□□□ 0.86
ITGB5-210ENST00000496703 HTRA3P83110 453 aa20.4■□□□□ 0.86
ITGB5-210ENST00000496703 IFIT5Q13325 482 aaKnown RBP20.4■□□□□ 0.86
ITGB5-210ENST00000496703 EAPPQ56P03 285 aaPredicted RBP20.4■□□□□ 0.86
ITGB5-210ENST00000496703 ANKRD44Q8N8A2 993 aa20.4■□□□□ 0.86
ITGB5-210ENST00000496703 MPHOSPH8Q99549 860 aa20.4■□□□□ 0.86
ITGB5-210ENST00000496703 BICC1Q9H694 974 aaKnown RBP20.4■□□□□ 0.86
ITGB5-210ENST00000496703 PSMD14O00487 310 aa20.39■□□□□ 0.85
ITGB5-210ENST00000496703 CHRNDQ07001 517 aa20.39■□□□□ 0.85
ITGB5-210ENST00000496703 CHADLQ6NUI6 762 aa20.39■□□□□ 0.85
ITGB5-210ENST00000496703 TXNRD3Q86VQ6 643 aa20.39■□□□□ 0.85
ITGB5-210ENST00000496703 ZC3H12CQ9C0D7 883 aaKnown RBP20.39■□□□□ 0.85
ITGB5-210ENST00000496703 GPRC5DQ9NZD1 345 aa20.39■□□□□ 0.85
ITGB5-210ENST00000496703 TNNQ9UQP3 1299 aa20.39■□□□□ 0.85
ITGB5-210ENST00000496703 SNAP23O00161 211 aa20.38■□□□□ 0.85
ITGB5-210ENST00000496703 KLRK1P26718 216 aa20.38■□□□□ 0.85
ITGB5-210ENST00000496703 RABL6Q3YEC7 729 aaPredicted RBP20.38■□□□□ 0.85
ITGB5-210ENST00000496703 LDHDQ86WU2 507 aa20.38■□□□□ 0.85
ITGB5-210ENST00000496703 ZBTB12Q9Y330 459 aaPredicted RBP20.38■□□□□ 0.85
ITGB5-210ENST00000496703 MED23Q9ULK4 1368 aa20.37■□□□□ 0.85
ITGB5-210ENST00000496703 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
ITGB5-210ENST00000496703 TNIP1Q15025 636 aa20.37■□□□□ 0.85
ITGB5-210ENST00000496703 HELBQ8NG08 1087 aaPredicted RBP20.37■□□□□ 0.85
ITGB5-210ENST00000496703 TAF5LO75529 589 aa20.36■□□□□ 0.85
ITGB5-210ENST00000496703 APLP1P51693 650 aa20.36■□□□□ 0.85
ITGB5-210ENST00000496703 CCDC57Q2TAC2 916 aa20.36■□□□□ 0.85
ITGB5-210ENST00000496703 API5Q9BZZ5 524 aaKnown RBP20.36■□□□□ 0.85
ITGB5-210ENST00000496703 IRS2Q9Y4H2 1338 aa20.35■□□□□ 0.85
ITGB5-210ENST00000496703 PNMA8AQ86V59 439 aaPredicted RBP20.35■□□□□ 0.85
ITGB5-210ENST00000496703 PUS3Q9BZE2 481 aaKnown RBP20.35■□□□□ 0.85
ITGB5-210ENST00000496703 ZNF804BA4D1E1 1349 aa20.34■□□□□ 0.85
ITGB5-210ENST00000496703 KIF16BQ96L93 1317 aa20.34■□□□□ 0.85
ITGB5-210ENST00000496703 PASKQ96RG2 1323 aa20.34■□□□□ 0.85
ITGB5-210ENST00000496703 ITGBL1O95965 494 aaPredicted RBP20.34■□□□□ 0.85
ITGB5-210ENST00000496703 MAP1SQ66K74 1059 aaPredicted RBP20.34■□□□□ 0.85
ITGB5-210ENST00000496703 ARHGAP45Q92619 1136 aa20.34■□□□□ 0.85
ITGB5-210ENST00000496703 ANKRD2Q9GZV1 360 aa20.34■□□□□ 0.85
ITGB5-210ENST00000496703 CLEC11AQ9Y240 323 aa20.34■□□□□ 0.85
ITGB5-210ENST00000496703 LEMD3Q9Y2U8 911 aa20.34■□□□□ 0.85
ITGB5-210ENST00000496703 TRPM7Q96QT4 1865 aa20.34■□□□□ 0.85
ITGB5-210ENST00000496703 TRIM27P14373 513 aa20.33■□□□□ 0.85
ITGB5-210ENST00000496703 LDHAL6AQ6ZMR3 332 aa20.33■□□□□ 0.85
ITGB5-210ENST00000496703 TRPM4Q8TD43 1214 aa20.33■□□□□ 0.85
ITGB5-210ENST00000496703 CNOT7Q9UIV1 285 aaKnown RBP20.33■□□□□ 0.85
ITGB5-210ENST00000496703 VIL1P09327 827 aaKnown RBP20.32■□□□□ 0.84
ITGB5-210ENST00000496703 HIRAP54198 1017 aaPredicted RBP20.32■□□□□ 0.84
ITGB5-210ENST00000496703 TAF7LQ5H9L4 462 aa20.32■□□□□ 0.84
ITGB5-210ENST00000496703 MICALL2Q8IY33 904 aa20.32■□□□□ 0.84
ITGB5-210ENST00000496703 DNAJC5GQ8N7S2 189 aa20.32■□□□□ 0.84
ITGB5-210ENST00000496703 KLHDC4Q8TBB5 520 aa20.32■□□□□ 0.84
ITGB5-210ENST00000496703 ADARB2Q9NS39 739 aaKnown RBP20.32■□□□□ 0.84
ITGB5-210ENST00000496703 G3V3G9 751 aa20.31■□□□□ 0.84
ITGB5-210ENST00000496703 EGFRP00533 1210 aa20.31■□□□□ 0.84
ITGB5-210ENST00000496703 DCAF8Q5TAQ9 597 aa20.31■□□□□ 0.84
ITGB5-210ENST00000496703 INTS3Q68E01 1043 aaKnown RBP20.31■□□□□ 0.84
ITGB5-210ENST00000496703 USP50Q70EL3 339 aaPredicted RBP20.31■□□□□ 0.84
ITGB5-210ENST00000496703 FRAT1Q92837 279 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms