RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 EYA3Q99504 573 aa15.1■□□□□ 0.01
CSNK1E-213ENST00000495232 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
CSNK1E-213ENST00000495232 VPS33BQ9H267 617 aa15.1■□□□□ 0.01
CSNK1E-213ENST00000495232 GGA1Q9UJY5 639 aa15.1■□□□□ 0.01
CSNK1E-213ENST00000495232 XDHP47989 1333 aa15.1■□□□□ 0.01
CSNK1E-213ENST00000495232 COL4A1P02462 1669 aa15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 PPIP5K2O43314 1243 aa15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 UFL1O94874 794 aa15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 MVPQ14764 893 aaKnown RBP15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 WASHC4Q2M389 1173 aa15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 ZNF594Q96JF6 807 aaPredicted RBP15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 RTFDC1Q9BY42 306 aaPredicted RBP15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 PODXL2Q9NZ53 605 aa15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 DDX19BQ9UMR2 479 aa15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 MINPP1Q9UNW1 487 aa15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 COG6Q9Y2V7 657 aa15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 ZC3H4Q9UPT8 1303 aaKnown RBP15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
CSNK1E-213ENST00000495232 ZBTB7BO15156 539 aaPredicted RBP15.08■□□□□ 0
CSNK1E-213ENST00000495232 KCNJ4P48050 445 aa15.08■□□□□ 0
CSNK1E-213ENST00000495232 PRELPP51888 382 aa15.08■□□□□ 0
CSNK1E-213ENST00000495232 DICER1Q9UPY3 1922 aaKnown RBP15.07■□□□□ 0
CSNK1E-213ENST00000495232 G3V3G9 751 aa15.07■□□□□ 0
CSNK1E-213ENST00000495232 ATP2B4P23634 1241 aa15.07■□□□□ 0
CSNK1E-213ENST00000495232 RRP1P56182 461 aaKnown RBP15.07■□□□□ 0
CSNK1E-213ENST00000495232 AOC3Q16853 763 aa15.07■□□□□ 0
CSNK1E-213ENST00000495232 DCAF8Q5TAQ9 597 aa15.07■□□□□ 0
CSNK1E-213ENST00000495232 DPY19L2Q6NUT2 758 aa15.07■□□□□ 0
CSNK1E-213ENST00000495232 NIM1KQ8IY84 436 aa15.07■□□□□ 0
CSNK1E-213ENST00000495232 TBC1D16Q8TBP0 767 aa15.07■□□□□ 0
CSNK1E-213ENST00000495232 ZC3H12CQ9C0D7 883 aaKnown RBP15.07■□□□□ 0
CSNK1E-213ENST00000495232 RIMBP2O15034 1052 aa15.06■□□□□ 0
CSNK1E-213ENST00000495232 SRGAP3O43295 1099 aa15.06■□□□□ 0
CSNK1E-213ENST00000495232 CHRNDQ07001 517 aa15.06■□□□□ 0
CSNK1E-213ENST00000495232 POLLQ9UGP5 575 aa15.06■□□□□ 0
CSNK1E-213ENST00000495232 LEMD3Q9Y2U8 911 aa15.06■□□□□ 0
CSNK1E-213ENST00000495232 TIAM2Q8IVF5 1701 aa15.06■□□□□ 0
CSNK1E-213ENST00000495232 EIF6P56537 245 aaKnown RBP15.05■□□□□ -0
CSNK1E-213ENST00000495232 KIAA2012Q0VF49 1180 aa15.05■□□□□ -0
CSNK1E-213ENST00000495232 KLHDC4Q8TBB5 520 aa15.05■□□□□ -0
CSNK1E-213ENST00000495232 ZNF526Q8TF50 670 aaPredicted RBP15.05■□□□□ -0
CSNK1E-213ENST00000495232 C1orf115Q9H7X2 142 aa15.05■□□□□ -0
CSNK1E-213ENST00000495232 MROH5Q6ZUA9 1318 aa15.05■□□□□ -0
CSNK1E-213ENST00000495232 ZNF804BA4D1E1 1349 aa15.04■□□□□ -0
CSNK1E-213ENST00000495232 KDM2BQ8NHM5 1336 aa15.04■□□□□ -0
CSNK1E-213ENST00000495232 METTL24Q5JXM2 366 aa15.04■□□□□ -0
CSNK1E-213ENST00000495232 C20orf194Q5TEA3 1177 aa15.04■□□□□ -0
CSNK1E-213ENST00000495232 HELBQ8NG08 1087 aaPredicted RBP15.04■□□□□ -0
CSNK1E-213ENST00000495232 DUOX1Q9NRD9 1551 aa15.03■□□□□ -0
CSNK1E-213ENST00000495232 TAF5LO75529 589 aa15.03■□□□□ -0
CSNK1E-213ENST00000495232 PTPN12Q05209 780 aaKnown RBP15.03■□□□□ -0
CSNK1E-213ENST00000495232 MTX1Q13505 466 aa15.03■□□□□ -0
CSNK1E-213ENST00000495232 LRRC24Q50LG9 513 aa15.03■□□□□ -0
CSNK1E-213ENST00000495232 GPR101Q96P66 508 aaPredicted RBP15.03■□□□□ -0
CSNK1E-213ENST00000495232 PUS3Q9BZE2 481 aaKnown RBP15.03■□□□□ -0
CSNK1E-213ENST00000495232 SIL1Q9H173 461 aa15.03■□□□□ -0
CSNK1E-213ENST00000495232 GPBP1L1Q9HC44 474 aaPredicted RBP15.03■□□□□ -0
CSNK1E-213ENST00000495232 FBXO3Q9UK99 471 aa15.03■□□□□ -0
CSNK1E-213ENST00000495232 ZNRF3Q9ULT6 936 aa15.03■□□□□ -0
CSNK1E-213ENST00000495232 RIPOR2Q9Y4F9 1068 aa15.03■□□□□ -0
CSNK1E-213ENST00000495232 LTBP1Q14766 1721 aa15.03■□□□□ -0
CSNK1E-213ENST00000495232 GLTPD2A6NH11 291 aa15.02■□□□□ -0
CSNK1E-213ENST00000495232 EYA2O00167 538 aa15.02■□□□□ -0
CSNK1E-213ENST00000495232 RFX5P48382 616 aaPredicted RBP15.02■□□□□ -0
CSNK1E-213ENST00000495232 ZNF784Q8NCA9 323 aaPredicted RBP15.02■□□□□ -0
CSNK1E-213ENST00000495232 FZD9O00144 591 aa15.01□□□□□ -0.01
CSNK1E-213ENST00000495232 CIAO1O76071 339 aa15.01□□□□□ -0.01
CSNK1E-213ENST00000495232 IL15P40933 162 aaPredicted RBP15.01□□□□□ -0.01
CSNK1E-213ENST00000495232 ATP8B2P98198 1209 aa15.01□□□□□ -0.01
CSNK1E-213ENST00000495232 DOK7Q18PE1 504 aa15.01□□□□□ -0.01
CSNK1E-213ENST00000495232 DBNDD1Q9H9R9 158 aa15.01□□□□□ -0.01
CSNK1E-213ENST00000495232 COPRSQ9NQ92 184 aa15.01□□□□□ -0.01
CSNK1E-213ENST00000495232 ZBTB40Q9NUA8 1239 aa15.01□□□□□ -0.01
CSNK1E-213ENST00000495232 PA2G4Q9UQ80 394 aaKnown RBP15.01□□□□□ -0.01
CSNK1E-213ENST00000495232 MED23Q9ULK4 1368 aa15□□□□□ -0.01
CSNK1E-213ENST00000495232 PNMA6EA0A0J9YXQ4 647 aa15□□□□□ -0.01
CSNK1E-213ENST00000495232 ECE2O60344 883 aa15□□□□□ -0.01
CSNK1E-213ENST00000495232 G3BP1Q13283 466 aaKnown RBP eCLIP15□□□□□ -0.01
CSNK1E-213ENST00000495232 UBE4AQ14139 1066 aa15□□□□□ -0.01
CSNK1E-213ENST00000495232 GJA3Q9Y6H8 435 aa15□□□□□ -0.01
CSNK1E-213ENST00000495232 PDE8BO95263 885 aa14.99□□□□□ -0.01
CSNK1E-213ENST00000495232 OS9Q13438 667 aaPredicted RBP14.99□□□□□ -0.01
CSNK1E-213ENST00000495232 TNIP1Q15025 636 aa14.99□□□□□ -0.01
CSNK1E-213ENST00000495232 CEP85Q6P2H3 762 aa14.99□□□□□ -0.01
CSNK1E-213ENST00000495232 GPC2Q8N158 579 aa14.99□□□□□ -0.01
CSNK1E-213ENST00000495232 CEP126Q9P2H0 1117 aa14.99□□□□□ -0.01
CSNK1E-213ENST00000495232 SUPT16HQ9Y5B9 1047 aaKnown RBP14.99□□□□□ -0.01
CSNK1E-213ENST00000495232 A0A1B0GUL6 1792 aa14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 ZNF541Q9H0D2 1346 aa14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 COL4A5P29400 1685 aa14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 WTIPA6NIX2 430 aaPredicted RBP14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 HMMRO75330 724 aa14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 DDNO94850 711 aaPredicted RBP14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 CIAPIN1Q6FI81 312 aa14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 ATG9AQ7Z3C6 839 aa14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 ZNF804AQ7Z570 1209 aa14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 PODNQ7Z5L7 613 aa14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 RPAP2Q8IXW5 612 aaPredicted RBP14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 SSH3Q8TE77 659 aa14.98□□□□□ -0.01
CSNK1E-213ENST00000495232 COA1Q9GZY4 146 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms