RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 DDX46Q7L014 1031 aaKnown RBP11.63□□□□□ -0.55
CSTF1-206ENST00000493039 CRAMP1Q96RY5 1269 aa11.63□□□□□ -0.55
CSTF1-206ENST00000493039 CD2APQ9Y5K6 639 aa11.63□□□□□ -0.55
CSTF1-206ENST00000493039 H0YIN7 160 aa11.63□□□□□ -0.55
CSTF1-206ENST00000493039 GRAPQ13588 217 aa11.63□□□□□ -0.55
CSTF1-206ENST00000493039 GRAPLQ8TC17 118 aaPredicted RBP11.63□□□□□ -0.55
CSTF1-206ENST00000493039 RPGRQ92834 1020 aaKnown RBP11.63□□□□□ -0.55
CSTF1-206ENST00000493039 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
CSTF1-206ENST00000493039 COL11A2P13942 1736 aaPredicted RBP11.62□□□□□ -0.55
CSTF1-206ENST00000493039 WTIPA6NIX2 430 aaPredicted RBP11.62□□□□□ -0.55
CSTF1-206ENST00000493039 EYA2O00167 538 aa11.62□□□□□ -0.55
CSTF1-206ENST00000493039 DEKP35659 375 aaKnown RBP11.62□□□□□ -0.55
CSTF1-206ENST00000493039 TGFB2P61812 414 aa11.62□□□□□ -0.55
CSTF1-206ENST00000493039 LDHAL6AQ6ZMR3 332 aa11.62□□□□□ -0.55
CSTF1-206ENST00000493039 NLGN2Q8NFZ4 835 aa11.62□□□□□ -0.55
CSTF1-206ENST00000493039 ZMYND15Q9H091 742 aa11.62□□□□□ -0.55
CSTF1-206ENST00000493039 PPP1R1BQ9UD71 204 aaPredicted RBP11.62□□□□□ -0.55
CSTF1-206ENST00000493039 KIF13BQ9NQT8 1826 aa11.62□□□□□ -0.55
CSTF1-206ENST00000493039 OLFM4Q6UX06 510 aa11.62□□□□□ -0.55
CSTF1-206ENST00000493039 RBM17Q96I25 401 aaKnown RBP11.62□□□□□ -0.55
CSTF1-206ENST00000493039 FHDC1Q9C0D6 1143 aaPredicted RBP11.62□□□□□ -0.55
CSTF1-206ENST00000493039 BSDC1Q9NW68 430 aaPredicted RBP11.62□□□□□ -0.55
CSTF1-206ENST00000493039 STYK1Q6J9G0 422 aa11.61□□□□□ -0.55
CSTF1-206ENST00000493039 ANKRD18AQ8IVF6 992 aa11.61□□□□□ -0.55
CSTF1-206ENST00000493039 VGLL2Q8N8G2 317 aa11.61□□□□□ -0.55
CSTF1-206ENST00000493039 C7orf43Q8WVR3 580 aa11.61□□□□□ -0.55
CSTF1-206ENST00000493039 ZNF622Q969S3 477 aaKnown RBP eCLIP11.61□□□□□ -0.55
CSTF1-206ENST00000493039 CDC5LQ99459 802 aaKnown RBP11.61□□□□□ -0.55
CSTF1-206ENST00000493039 MINPP1Q9UNW1 487 aa11.61□□□□□ -0.55
CSTF1-206ENST00000493039 KIAA1551Q9HCM1 1747 aa11.61□□□□□ -0.55
CSTF1-206ENST00000493039 APBB1O00213 710 aa11.6□□□□□ -0.55
CSTF1-206ENST00000493039 CIAO1O76071 339 aa11.6□□□□□ -0.55
CSTF1-206ENST00000493039 GLIPR1L2Q4G1C9 344 aa11.6□□□□□ -0.55
CSTF1-206ENST00000493039 LRP5O75197 1615 aa11.6□□□□□ -0.55
CSTF1-206ENST00000493039 SNAP23O00161 211 aa11.6□□□□□ -0.55
CSTF1-206ENST00000493039 SMARCA5O60264 1052 aaPredicted RBP11.6□□□□□ -0.55
CSTF1-206ENST00000493039 BBOX1O75936 387 aa11.6□□□□□ -0.55
CSTF1-206ENST00000493039 HELBQ8NG08 1087 aaPredicted RBP11.6□□□□□ -0.55
CSTF1-206ENST00000493039 GCC1Q96CN9 775 aa11.6□□□□□ -0.55
CSTF1-206ENST00000493039 PDZRN3Q9UPQ7 1066 aa11.6□□□□□ -0.55
CSTF1-206ENST00000493039 ALDH1B1P30837 517 aa11.59□□□□□ -0.55
CSTF1-206ENST00000493039 IGHMBP2P38935 993 aaKnown RBP11.59□□□□□ -0.55
CSTF1-206ENST00000493039 IL15P40933 162 aaPredicted RBP11.59□□□□□ -0.55
CSTF1-206ENST00000493039 TFCP2Q12800 502 aa11.59□□□□□ -0.55
CSTF1-206ENST00000493039 G3BP1Q13283 466 aaKnown RBP eCLIP11.59□□□□□ -0.553e-9■■■□□ 18.8
CSTF1-206ENST00000493039 PRPF40BQ6NWY9 871 aaKnown RBP11.59□□□□□ -0.55
CSTF1-206ENST00000493039 SKAP1Q86WV1 359 aa11.59□□□□□ -0.55
CSTF1-206ENST00000493039 RHPN1Q8TCX5 695 aa11.59□□□□□ -0.55
CSTF1-206ENST00000493039 MPHOSPH8Q99549 860 aa11.59□□□□□ -0.55
CSTF1-206ENST00000493039 SYT17Q9BSW7 474 aa11.59□□□□□ -0.55
CSTF1-206ENST00000493039 WWC3Q9ULE0 1092 aa11.59□□□□□ -0.55
CSTF1-206ENST00000493039 CHRNDQ07001 517 aa11.59□□□□□ -0.55
CSTF1-206ENST00000493039 CENPQQ7L2Z9 268 aaPredicted RBP11.59□□□□□ -0.55
CSTF1-206ENST00000493039 CNNM1Q9NRU3 951 aa11.59□□□□□ -0.55
CSTF1-206ENST00000493039 RAB11FIP3O75154 756 aa11.58□□□□□ -0.56
CSTF1-206ENST00000493039 TAF5LO75529 589 aa11.58□□□□□ -0.56
CSTF1-206ENST00000493039 NUCB1Q02818 461 aa11.58□□□□□ -0.56
CSTF1-206ENST00000493039 C16orf71Q8IYS4 520 aaPredicted RBP11.58□□□□□ -0.56
CSTF1-206ENST00000493039 CNKSR1Q969H4 720 aa11.58□□□□□ -0.56
CSTF1-206ENST00000493039 IL1RAPL2Q9NP60 686 aa11.58□□□□□ -0.56
CSTF1-206ENST00000493039 ATP6V0A2Q9Y487 856 aa11.58□□□□□ -0.56
CSTF1-206ENST00000493039 ANKRD45Q5TZF3 282 aa11.58□□□□□ -0.56
CSTF1-206ENST00000493039 SP8Q8IXZ3 490 aa11.58□□□□□ -0.56
CSTF1-206ENST00000493039 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
CSTF1-206ENST00000493039 SLX4Q8IY92 1834 aa11.57□□□□□ -0.56
CSTF1-206ENST00000493039 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
CSTF1-206ENST00000493039 PDE8BO95263 885 aa11.57□□□□□ -0.56
CSTF1-206ENST00000493039 HSP90AB4PQ58FF6 505 aa11.57□□□□□ -0.56
CSTF1-206ENST00000493039 EAF2Q96CJ1 260 aaPredicted RBP11.57□□□□□ -0.56
CSTF1-206ENST00000493039 KIF1BPQ96EK5 621 aa11.57□□□□□ -0.56
CSTF1-206ENST00000493039 LRRCC1Q9C099 1032 aa11.57□□□□□ -0.56
CSTF1-206ENST00000493039 PIM2Q9P1W9 311 aa11.57□□□□□ -0.56
CSTF1-206ENST00000493039 SNED1Q8TER0 1413 aa11.57□□□□□ -0.56
CSTF1-206ENST00000493039 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
CSTF1-206ENST00000493039 FGFR2P21802 821 aa11.56□□□□□ -0.56
CSTF1-206ENST00000493039 GPSM2P81274 684 aa11.56□□□□□ -0.56
CSTF1-206ENST00000493039 OS9Q13438 667 aaPredicted RBP11.56□□□□□ -0.56
CSTF1-206ENST00000493039 METTL24Q5JXM2 366 aa11.56□□□□□ -0.56
CSTF1-206ENST00000493039 OTUD7AQ8TE49 926 aaPredicted RBP11.56□□□□□ -0.56
CSTF1-206ENST00000493039 MROH5Q6ZUA9 1318 aa11.56□□□□□ -0.56
CSTF1-206ENST00000493039 PDE4AP27815 886 aa11.56□□□□□ -0.56
CSTF1-206ENST00000493039 TIMM10P62072 90 aa11.56□□□□□ -0.56
CSTF1-206ENST00000493039 CHD1LQ86WJ1 897 aa11.56□□□□□ -0.56
CSTF1-206ENST00000493039 LNPKQ9C0E8 428 aa11.56□□□□□ -0.56
CSTF1-206ENST00000493039 CEP126Q9P2H0 1117 aa11.56□□□□□ -0.56
CSTF1-206ENST00000493039 ZNF219Q9P2Y4 722 aaPredicted RBP11.56□□□□□ -0.56
CSTF1-206ENST00000493039 C21orf2O43822 256 aa11.55□□□□□ -0.56
CSTF1-206ENST00000493039 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
CSTF1-206ENST00000493039 TLR7Q9NYK1 1049 aaKnown RBP11.55□□□□□ -0.56
CSTF1-206ENST00000493039 DLEC1Q9Y238 1755 aa11.55□□□□□ -0.56
CSTF1-206ENST00000493039 KLRK1P26718 216 aa11.55□□□□□ -0.56
CSTF1-206ENST00000493039 TNNI3KQ59H18 835 aa11.55□□□□□ -0.56
CSTF1-206ENST00000493039 TMC4Q7Z404 712 aa11.55□□□□□ -0.56
CSTF1-206ENST00000493039 GPR108Q9NPR9 543 aa11.55□□□□□ -0.56
CSTF1-206ENST00000493039 POLLQ9UGP5 575 aa11.55□□□□□ -0.56
CSTF1-206ENST00000493039 NSFL1CQ9UNZ2 370 aaKnown RBP11.55□□□□□ -0.56
CSTF1-206ENST00000493039 FPGT-TNNI3KV9GXZ4 949 aa11.55□□□□□ -0.56
CSTF1-206ENST00000493039 IRS2Q9Y4H2 1338 aa11.55□□□□□ -0.56
CSTF1-206ENST00000493039 SALL3Q9BXA9 1300 aa11.54□□□□□ -0.56
CSTF1-206ENST00000493039 DALRD3Q5D0E6 543 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms