RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 GREM2Q9H772 168 aa23■■□□□ 1.27
HMGN1-219ENST00000491183 KCNQ5Q9NR82 932 aa23■■□□□ 1.27
HMGN1-219ENST00000491183 MKRN1Q9UHC7 482 aaKnown RBP23■■□□□ 1.27
HMGN1-219ENST00000491183 BCL2L13Q9BXK5 485 aa22.99■■□□□ 1.27
HMGN1-219ENST00000491183 ANKIB1Q9P2G1 1089 aa22.99■■□□□ 1.27
HMGN1-219ENST00000491183 ZBTB12Q9Y330 459 aaPredicted RBP22.99■■□□□ 1.27
HMGN1-219ENST00000491183 SHTN1A0MZ66 631 aa22.98■■□□□ 1.27
HMGN1-219ENST00000491183 F6X3S4 739 aa22.98■■□□□ 1.27
HMGN1-219ENST00000491183 PSMD14O00487 310 aa22.98■■□□□ 1.27
HMGN1-219ENST00000491183 ECE2O60344 883 aa22.98■■□□□ 1.27
HMGN1-219ENST00000491183 UFL1O94874 794 aa22.98■■□□□ 1.27
HMGN1-219ENST00000491183 FMR1Q06787 632 aaKnown RBP eCLIP22.98■■□□□ 1.27
HMGN1-219ENST00000491183 CDC5LQ99459 802 aaKnown RBP22.98■■□□□ 1.27
HMGN1-219ENST00000491183 PLA2G12BQ9BX93 195 aa22.98■■□□□ 1.27
HMGN1-219ENST00000491183 ZC3H12CQ9C0D7 883 aaKnown RBP22.98■■□□□ 1.27
HMGN1-219ENST00000491183 CNOT7Q9UIV1 285 aaKnown RBP22.98■■□□□ 1.27
HMGN1-219ENST00000491183 GGA1Q9UJY5 639 aa22.98■■□□□ 1.27
HMGN1-219ENST00000491183 HIRAP54198 1017 aaPredicted RBP22.97■■□□□ 1.27
HMGN1-219ENST00000491183 RTL9Q8NET4 1388 aa22.97■■□□□ 1.27
HMGN1-219ENST00000491183 WTIPA6NIX2 430 aaPredicted RBP22.96■■□□□ 1.27
HMGN1-219ENST00000491183 BSDC1Q9NW68 430 aaPredicted RBP22.96■■□□□ 1.27
HMGN1-219ENST00000491183 SCN9AQ15858 1988 aa22.96■■□□□ 1.27
HMGN1-219ENST00000491183 CSF1RP07333 972 aa22.95■■□□□ 1.26
HMGN1-219ENST00000491183 XDHP47989 1333 aa22.95■■□□□ 1.26
HMGN1-219ENST00000491183 CNTNAP1P78357 1384 aa22.95■■□□□ 1.26
HMGN1-219ENST00000491183 BEND3Q5T5X7 828 aa22.95■■□□□ 1.26
HMGN1-219ENST00000491183 DPF2Q92785 391 aa22.95■■□□□ 1.26
HMGN1-219ENST00000491183 SPEF2Q9C093 1822 aa22.95■■□□□ 1.26
HMGN1-219ENST00000491183 PGAP2Q9UHJ9 254 aa22.95■■□□□ 1.26
HMGN1-219ENST00000491183 MINPP1Q9UNW1 487 aa22.95■■□□□ 1.26
HMGN1-219ENST00000491183 TRAF5O00463 557 aa22.94■■□□□ 1.26
HMGN1-219ENST00000491183 TRPM4Q8TD43 1214 aa22.94■■□□□ 1.26
HMGN1-219ENST00000491183 ATP2B4P23634 1241 aa22.93■■□□□ 1.26
HMGN1-219ENST00000491183 MICALL2Q8IY33 904 aa22.93■■□□□ 1.26
HMGN1-219ENST00000491183 PCNTO95613 3336 aa22.92■■□□□ 1.26
HMGN1-219ENST00000491183 H7C1D1 291 aa22.92■■□□□ 1.26
HMGN1-219ENST00000491183 G3V3G9 751 aa22.91■■□□□ 1.26
HMGN1-219ENST00000491183 VIL1P09327 827 aaKnown RBP22.91■■□□□ 1.26
HMGN1-219ENST00000491183 HSPA1AP0DMV8 641 aaKnown RBP22.91■■□□□ 1.26
HMGN1-219ENST00000491183 HSPA1BP0DMV9 641 aaKnown RBP22.91■■□□□ 1.26
HMGN1-219ENST00000491183 ITGA6P23229 1130 aa22.91■■□□□ 1.26
HMGN1-219ENST00000491183 VEGFBP49765 207 aa22.91■■□□□ 1.26
HMGN1-219ENST00000491183 FAM161AQ3B820 660 aa22.91■■□□□ 1.26
HMGN1-219ENST00000491183 DCAF8Q5TAQ9 597 aa22.91■■□□□ 1.26
HMGN1-219ENST00000491183 CST9Q5W186 159 aa22.91■■□□□ 1.26
HMGN1-219ENST00000491183 SAMD7Q7Z3H4 446 aa22.91■■□□□ 1.26
HMGN1-219ENST00000491183 ZC3H15Q8WU90 426 aaKnown RBP22.91■■□□□ 1.26
HMGN1-219ENST00000491183 TRPM7Q96QT4 1865 aa22.91■■□□□ 1.26
HMGN1-219ENST00000491183 RASSF10A6NK89 507 aa22.9■■□□□ 1.26
HMGN1-219ENST00000491183 RPS12P25398 132 aaKnown RBP22.9■■□□□ 1.26
HMGN1-219ENST00000491183 FOXO4P98177 505 aa22.9■■□□□ 1.26
HMGN1-219ENST00000491183 GLIS2Q9BZE0 524 aaPredicted RBP22.9■■□□□ 1.26
HMGN1-219ENST00000491183 EGFRP00533 1210 aa22.89■■□□□ 1.25
HMGN1-219ENST00000491183 IGHMBP2P38935 993 aaKnown RBP22.89■■□□□ 1.25
HMGN1-219ENST00000491183 CCT4P50991 539 aaKnown RBP22.89■■□□□ 1.25
HMGN1-219ENST00000491183 DEFB115Q30KQ5 88 aa22.89■■□□□ 1.25
HMGN1-219ENST00000491183 IFFO2Q5TF58 517 aa22.89■■□□□ 1.25
HMGN1-219ENST00000491183 SLFN5Q08AF3 891 aa22.88■■□□□ 1.25
HMGN1-219ENST00000491183 TBC1D10BQ4KMP7 808 aaPredicted RBP22.88■■□□□ 1.25
HMGN1-219ENST00000491183 PSME4Q14997 1843 aa22.87■■□□□ 1.25
HMGN1-219ENST00000491183 E9PSI1 815 aa22.87■■□□□ 1.25
HMGN1-219ENST00000491183 EPHA10Q5JZY3 1008 aa22.87■■□□□ 1.25
HMGN1-219ENST00000491183 ABT1Q9ULW3 272 aaKnown RBP22.87■■□□□ 1.25
HMGN1-219ENST00000491183 GRM8O00222 908 aa22.86■■□□□ 1.25
HMGN1-219ENST00000491183 RBM26Q5T8P6 1007 aaKnown RBP22.86■■□□□ 1.25
HMGN1-219ENST00000491183 COL13A1Q5TAT6 717 aaPredicted RBP22.86■■□□□ 1.25
HMGN1-219ENST00000491183 SLC4A10Q6U841 1118 aa22.86■■□□□ 1.25
HMGN1-219ENST00000491183 PODNQ7Z5L7 613 aa22.86■■□□□ 1.25
HMGN1-219ENST00000491183 TXNRD3Q86VQ6 643 aa22.86■■□□□ 1.25
HMGN1-219ENST00000491183 MRPL50Q8N5N7 158 aaKnown RBP22.86■■□□□ 1.25
HMGN1-219ENST00000491183 CDCA7LQ96GN5 454 aa22.86■■□□□ 1.25
HMGN1-219ENST00000491183 MPHOSPH8Q99549 860 aa22.86■■□□□ 1.25
HMGN1-219ENST00000491183 LEMD3Q9Y2U8 911 aa22.86■■□□□ 1.25
HMGN1-219ENST00000491183 MED23Q9ULK4 1368 aa22.86■■□□□ 1.25
HMGN1-219ENST00000491183 POLR2AP24928 1970 aaKnown RBP22.85■■□□□ 1.25
HMGN1-219ENST00000491183 ANKRD18BA2A2Z9 1011 aa22.85■■□□□ 1.25
HMGN1-219ENST00000491183 RSBN1LQ6PCB5 846 aaPredicted RBP22.85■■□□□ 1.25
HMGN1-219ENST00000491183 CDC37L1Q7L3B6 337 aa22.85■■□□□ 1.25
HMGN1-219ENST00000491183 ALDH1L1O75891 902 aa22.84■■□□□ 1.25
HMGN1-219ENST00000491183 LMBR1LQ6UX01 489 aa22.84■■□□□ 1.25
HMGN1-219ENST00000491183 DLK2Q6UY11 383 aa22.84■■□□□ 1.25
HMGN1-219ENST00000491183 GMLQ99445 158 aa22.84■■□□□ 1.25
HMGN1-219ENST00000491183 USP17L3A6NCW0 530 aa22.83■■□□□ 1.25
HMGN1-219ENST00000491183 USP17L4A6NCW7 530 aa22.83■■□□□ 1.25
HMGN1-219ENST00000491183 CCER2I3L3R5 266 aa22.83■■□□□ 1.25
HMGN1-219ENST00000491183 CHRNDQ07001 517 aa22.83■■□□□ 1.25
HMGN1-219ENST00000491183 USP17L1Q7RTZ2 530 aa22.83■■□□□ 1.25
HMGN1-219ENST00000491183 USP48Q86UV5 1035 aa22.83■■□□□ 1.25
HMGN1-219ENST00000491183 AGBL3Q8NEM8 1001 aa22.83■■□□□ 1.25
HMGN1-219ENST00000491183 SRCIN1Q9C0H9 1055 aa22.83■■□□□ 1.25
HMGN1-219ENST00000491183 ANKRD2Q9GZV1 360 aa22.83■■□□□ 1.25
HMGN1-219ENST00000491183 TLL2Q9Y6L7 1015 aa22.83■■□□□ 1.25
HMGN1-219ENST00000491183 ZNF804BA4D1E1 1349 aa22.82■■□□□ 1.24
HMGN1-219ENST00000491183 ZNF609O15014 1411 aa22.82■■□□□ 1.24
HMGN1-219ENST00000491183 CELF2O95319 508 aaKnown RBP22.82■■□□□ 1.24
HMGN1-219ENST00000491183 KLRK1P26718 216 aa22.82■■□□□ 1.24
HMGN1-219ENST00000491183 ZNF280AP59817 542 aaPredicted RBP22.82■■□□□ 1.24
HMGN1-219ENST00000491183 IFIT5Q13325 482 aaKnown RBP22.82■■□□□ 1.24
HMGN1-219ENST00000491183 SSH1Q8WYL5 1049 aa22.82■■□□□ 1.24
HMGN1-219ENST00000491183 C9orf78Q9NZ63 289 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms