RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
SSBP1-212ENST00000489378 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
SSBP1-212ENST00000489378 C2orf69Q8N8R5 385 aa12.38□□□□□ -0.43
SSBP1-212ENST00000489378 GAS2L2Q8NHY3 880 aa12.38□□□□□ -0.43
SSBP1-212ENST00000489378 VPS33BQ9H267 617 aa12.38□□□□□ -0.43
SSBP1-212ENST00000489378 H7C1D1 291 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 EGFRP00533 1210 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 PKN2Q16513 984 aaKnown RBP12.37□□□□□ -0.43
SSBP1-212ENST00000489378 TMEM92Q6UXU6 159 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 RTFDC1Q9BY42 306 aaPredicted RBP12.37□□□□□ -0.43
SSBP1-212ENST00000489378 ATP6V0A2Q9Y487 856 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 NUP98P52948 1817 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 YDJCA8MPS7 323 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 GPTP24298 496 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 EMP3P54852 163 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 TNIP1Q15025 636 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 ZNF296Q8WUU4 475 aaPredicted RBP12.37□□□□□ -0.43
SSBP1-212ENST00000489378 HDAC9Q9UKV0 1011 aa12.37□□□□□ -0.43
SSBP1-212ENST00000489378 UBN2Q6ZU65 1347 aa12.36□□□□□ -0.43
SSBP1-212ENST00000489378 KIAA2012Q0VF49 1180 aa12.36□□□□□ -0.43
SSBP1-212ENST00000489378 TBC1D10BQ4KMP7 808 aaPredicted RBP12.36□□□□□ -0.43
SSBP1-212ENST00000489378 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
SSBP1-212ENST00000489378 SUSD4Q5VX71 490 aa12.36□□□□□ -0.43
SSBP1-212ENST00000489378 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
SSBP1-212ENST00000489378 SUPT20HQ8NEM7 779 aa12.36□□□□□ -0.43
SSBP1-212ENST00000489378 KNSTRNQ9Y448 316 aa12.36□□□□□ -0.43
SSBP1-212ENST00000489378 TBC1D8O95759 1140 aa12.35□□□□□ -0.43
SSBP1-212ENST00000489378 DPP8Q6V1X1 898 aaPredicted RBP12.35□□□□□ -0.43
SSBP1-212ENST00000489378 RASAL3Q86YV0 1011 aa12.35□□□□□ -0.43
SSBP1-212ENST00000489378 SPNS2Q8IVW8 549 aa12.35□□□□□ -0.43
SSBP1-212ENST00000489378 HS3ST6Q96QI5 342 aa12.35□□□□□ -0.43
SSBP1-212ENST00000489378 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
SSBP1-212ENST00000489378 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
SSBP1-212ENST00000489378 TRIOBPQ9H2D6 2365 aa12.34□□□□□ -0.43
SSBP1-212ENST00000489378 FBXO46Q6PJ61 603 aaPredicted RBP12.34□□□□□ -0.43
SSBP1-212ENST00000489378 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
SSBP1-212ENST00000489378 ABCC4O15439 1325 aa12.34□□□□□ -0.43
SSBP1-212ENST00000489378 KIAA0100Q14667 2235 aaKnown RBP12.34□□□□□ -0.43
SSBP1-212ENST00000489378 CEP290O15078 2479 aa12.33□□□□□ -0.44
SSBP1-212ENST00000489378 ERVV-1B6SEH8 477 aa12.33□□□□□ -0.44
SSBP1-212ENST00000489378 U2SURPO15042 1029 aaKnown RBP12.33□□□□□ -0.44
SSBP1-212ENST00000489378 NTSR2O95665 410 aa12.33□□□□□ -0.44
SSBP1-212ENST00000489378 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
SSBP1-212ENST00000489378 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
SSBP1-212ENST00000489378 MPNDQ8N594 471 aa12.33□□□□□ -0.44
SSBP1-212ENST00000489378 DCPSQ96C86 337 aaKnown RBP12.33□□□□□ -0.44
SSBP1-212ENST00000489378 MAP3K15Q6ZN16 1313 aa12.33□□□□□ -0.44
SSBP1-212ENST00000489378 COL3A1P02461 1466 aaPredicted RBP12.33□□□□□ -0.44
SSBP1-212ENST00000489378 SZT2Q5T011 3432 aa12.33□□□□□ -0.44
SSBP1-212ENST00000489378 HTTP42858 3142 aa12.32□□□□□ -0.44
SSBP1-212ENST00000489378 ASTN2O75129 1339 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-212ENST00000489378 DPF2Q92785 391 aa12.32□□□□□ -0.44
SSBP1-212ENST00000489378 FAM205CA6NFA0 338 aa12.31□□□□□ -0.44
SSBP1-212ENST00000489378 PSMD14O00487 310 aa12.31□□□□□ -0.44
SSBP1-212ENST00000489378 MCM10Q7L590 875 aa12.31□□□□□ -0.44
SSBP1-212ENST00000489378 SP8Q8IXZ3 490 aa12.31□□□□□ -0.44
SSBP1-212ENST00000489378 ZNF34Q8IZ26 560 aa12.31□□□□□ -0.44
SSBP1-212ENST00000489378 CDCA5Q96FF9 252 aa12.31□□□□□ -0.44
SSBP1-212ENST00000489378 KRTAP3-3Q9BYR6 98 aa12.31□□□□□ -0.44
SSBP1-212ENST00000489378 KRTAP3-2Q9BYR7 98 aa12.31□□□□□ -0.44
SSBP1-212ENST00000489378 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
SSBP1-212ENST00000489378 DUOX1Q9NRD9 1551 aa12.31□□□□□ -0.44
SSBP1-212ENST00000489378 GPR25O00155 361 aa12.3□□□□□ -0.44
SSBP1-212ENST00000489378 HOXB1P14653 301 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-212ENST00000489378 MMRN1Q13201 1228 aa12.3□□□□□ -0.44
SSBP1-212ENST00000489378 NLRP3Q96P20 1036 aa12.3□□□□□ -0.44
SSBP1-212ENST00000489378 GGA3Q9NZ52 723 aa12.3□□□□□ -0.44
SSBP1-212ENST00000489378 LAMB4A4D0S4 1761 aa12.3□□□□□ -0.44
SSBP1-212ENST00000489378 CENPFP49454 3210 aa12.3□□□□□ -0.44
SSBP1-212ENST00000489378 BBOX1O75936 387 aa12.29□□□□□ -0.44
SSBP1-212ENST00000489378 KIF6Q6ZMV9 814 aa12.29□□□□□ -0.44
SSBP1-212ENST00000489378 MOB2Q70IA6 237 aa12.29□□□□□ -0.44
SSBP1-212ENST00000489378 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
SSBP1-212ENST00000489378 FBXO22Q8NEZ5 403 aa12.29□□□□□ -0.44
SSBP1-212ENST00000489378 TAF1P21675 1872 aa12.29□□□□□ -0.44
SSBP1-212ENST00000489378 CUL9Q8IWT3 2517 aa12.29□□□□□ -0.44
SSBP1-212ENST00000489378 LAMB2P55268 1798 aa12.29□□□□□ -0.44
SSBP1-212ENST00000489378 BRCA2P51587 3418 aa12.29□□□□□ -0.44
SSBP1-212ENST00000489378 HSPA5P11021 654 aaKnown RBP12.28□□□□□ -0.44
SSBP1-212ENST00000489378 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 DCTN1Q14203 1278 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 SLC10A5Q5PT55 438 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 R3HDMLQ9H3Y0 253 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 DBNDD1Q9H9R9 158 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 KCNQ5Q9NR82 932 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 RRP7AQ9Y3A4 280 aaKnown RBP12.28□□□□□ -0.44
SSBP1-212ENST00000489378 DLL1O00548 723 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 MYL6BP14649 208 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 KIF4BQ2VIQ3 1234 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 MIS18AQ9NYP9 233 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 PAPPA2Q9BXP8 1791 aa12.28□□□□□ -0.44
SSBP1-212ENST00000489378 RTL9Q8NET4 1388 aa12.27□□□□□ -0.45
SSBP1-212ENST00000489378 FKTNO75072 461 aa12.27□□□□□ -0.45
SSBP1-212ENST00000489378 NOM1Q5C9Z4 860 aaKnown RBP12.27□□□□□ -0.45
SSBP1-212ENST00000489378 CC2D1BQ5T0F9 858 aaKnown RBP12.27□□□□□ -0.45
SSBP1-212ENST00000489378 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.45
SSBP1-212ENST00000489378 UBE2Q2LH0YL09 131 aa12.26□□□□□ -0.45
SSBP1-212ENST00000489378 RIMBP2O15034 1052 aa12.26□□□□□ -0.45
SSBP1-212ENST00000489378 RPS12P25398 132 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms