RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 IGHMBP2P38935 993 aaKnown RBP15.71■□□□□ 0.11
TOP3A-206ENST00000489131 TICAM2Q86XR7 235 aa15.71■□□□□ 0.11
TOP3A-206ENST00000489131 SLC16A10Q8TF71 515 aa15.71■□□□□ 0.11
TOP3A-206ENST00000489131 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.71■□□□□ 0.11
TOP3A-206ENST00000489131 SPEF2Q9C093 1822 aa15.71■□□□□ 0.1
TOP3A-206ENST00000489131 ZBTB22O15209 634 aa15.7■□□□□ 0.1
TOP3A-206ENST00000489131 EIF5BO60841 1220 aaKnown RBP15.7■□□□□ 0.1
TOP3A-206ENST00000489131 FGFR2P21802 821 aa15.7■□□□□ 0.1
TOP3A-206ENST00000489131 HOXA10P31260 410 aaPredicted RBP15.7■□□□□ 0.1
TOP3A-206ENST00000489131 ANKRD18AQ8IVF6 992 aa15.7■□□□□ 0.1
TOP3A-206ENST00000489131 MPHOSPH8Q99549 860 aa15.7■□□□□ 0.1
TOP3A-206ENST00000489131 BRIP1Q9BX63 1249 aa15.7■□□□□ 0.1
TOP3A-206ENST00000489131 CNNM1Q9NRU3 951 aa15.7■□□□□ 0.1
TOP3A-206ENST00000489131 TLR7Q9NYK1 1049 aaKnown RBP15.7■□□□□ 0.1
TOP3A-206ENST00000489131 A0A1B0GUL7 405 aa15.69■□□□□ 0.1
TOP3A-206ENST00000489131 CDC45O75419 566 aa15.69■□□□□ 0.1
TOP3A-206ENST00000489131 METTL24Q5JXM2 366 aa15.69■□□□□ 0.1
TOP3A-206ENST00000489131 ZNF512BQ96KM6 892 aaPredicted RBP15.69■□□□□ 0.1
TOP3A-206ENST00000489131 CCDC8Q9H0W5 538 aaPredicted RBP15.69■□□□□ 0.1
TOP3A-206ENST00000489131 LRRC37AA6NMS7 1700 aa15.68■□□□□ 0.1
TOP3A-206ENST00000489131 MMP10P09238 476 aa15.68■□□□□ 0.1
TOP3A-206ENST00000489131 RPS8P62241 208 aaKnown RBP15.68■□□□□ 0.1
TOP3A-206ENST00000489131 PUM3Q15397 648 aaKnown RBP15.68■□□□□ 0.1
TOP3A-206ENST00000489131 TSHZ3Q63HK5 1081 aa15.68■□□□□ 0.1
TOP3A-206ENST00000489131 DBNDD2Q9BQY9 259 aa15.68■□□□□ 0.1
TOP3A-206ENST00000489131 RFX7Q2KHR2 1363 aa15.67■□□□□ 0.1
TOP3A-206ENST00000489131 GRAPQ13588 217 aa15.67■□□□□ 0.1
TOP3A-206ENST00000489131 ATP2B3Q16720 1220 aa15.67■□□□□ 0.1
TOP3A-206ENST00000489131 TBC1D9Q6ZT07 1266 aa15.67■□□□□ 0.1
TOP3A-206ENST00000489131 DDX46Q7L014 1031 aaKnown RBP15.67■□□□□ 0.1
TOP3A-206ENST00000489131 GRAPLQ8TC17 118 aaPredicted RBP15.67■□□□□ 0.1
TOP3A-206ENST00000489131 LPIN2Q92539 896 aa15.67■□□□□ 0.1
TOP3A-206ENST00000489131 CELF1Q92879 486 aaKnown RBP15.67■□□□□ 0.1
TOP3A-206ENST00000489131 CRAMP1Q96RY5 1269 aa15.67■□□□□ 0.1
TOP3A-206ENST00000489131 PARP3Q9Y6F1 533 aa15.67■□□□□ 0.1
TOP3A-206ENST00000489131 TAF1P21675 1872 aa15.67■□□□□ 0.1
TOP3A-206ENST00000489131 AK9Q5TCS8 1911 aa15.66■□□□□ 0.1
TOP3A-206ENST00000489131 NPHP1O15259 732 aa15.66■□□□□ 0.1
TOP3A-206ENST00000489131 MSH5O43196 834 aa15.66■□□□□ 0.1
TOP3A-206ENST00000489131 TIMM10P62072 90 aa15.66■□□□□ 0.1
TOP3A-206ENST00000489131 CNTROBQ8N137 903 aa15.66■□□□□ 0.1
TOP3A-206ENST00000489131 HAUS7Q99871 368 aa15.66■□□□□ 0.1
TOP3A-206ENST00000489131 COL11A2P13942 1736 aaPredicted RBP15.65■□□□□ 0.1
TOP3A-206ENST00000489131 CHRNDQ07001 517 aa15.65■□□□□ 0.1
TOP3A-206ENST00000489131 UBE4AQ14139 1066 aa15.65■□□□□ 0.1
TOP3A-206ENST00000489131 TMC4Q7Z404 712 aa15.65■□□□□ 0.1
TOP3A-206ENST00000489131 EVI5LQ96CN4 794 aa15.65■□□□□ 0.1
TOP3A-206ENST00000489131 XAGE2Q96GT9 111 aa15.65■□□□□ 0.1
TOP3A-206ENST00000489131 MINPP1Q9UNW1 487 aa15.65■□□□□ 0.1
TOP3A-206ENST00000489131 KIF13BQ9NQT8 1826 aa15.64■□□□□ 0.09
TOP3A-206ENST00000489131 PDE6BP35913 854 aa15.64■□□□□ 0.09
TOP3A-206ENST00000489131 LTBP1Q14766 1721 aa15.64■□□□□ 0.09
TOP3A-206ENST00000489131 C10orf71Q711Q0 1435 aa15.64■□□□□ 0.09
TOP3A-206ENST00000489131 CCDC24Q8N4L8 307 aa15.64■□□□□ 0.09
TOP3A-206ENST00000489131 RPGRQ92834 1020 aaKnown RBP15.64■□□□□ 0.09
TOP3A-206ENST00000489131 RBM17Q96I25 401 aaKnown RBP15.64■□□□□ 0.09
TOP3A-206ENST00000489131 ANKRD2Q9GZV1 360 aa15.64■□□□□ 0.09
TOP3A-206ENST00000489131 BBOX1O75936 387 aa15.63■□□□□ 0.09
TOP3A-206ENST00000489131 SRGNP10124 158 aa15.63■□□□□ 0.09
TOP3A-206ENST00000489131 ARID4AP29374 1257 aaPredicted RBP15.63■□□□□ 0.09
TOP3A-206ENST00000489131 CCDC158Q5M9N0 1113 aa15.63■□□□□ 0.09
TOP3A-206ENST00000489131 CASC1Q6TDU7 716 aa15.63■□□□□ 0.09
TOP3A-206ENST00000489131 NEUROD6Q96NK8 337 aa15.63■□□□□ 0.09
TOP3A-206ENST00000489131 DLEC1Q9Y238 1755 aa15.62■□□□□ 0.09
TOP3A-206ENST00000489131 EPB41L2O43491 1005 aaKnown RBP15.62■□□□□ 0.09
TOP3A-206ENST00000489131 SEC24BO95487 1268 aa15.62■□□□□ 0.09
TOP3A-206ENST00000489131 SLC5A1P13866 664 aa15.62■□□□□ 0.09
TOP3A-206ENST00000489131 NPR1P16066 1061 aa15.62■□□□□ 0.09
TOP3A-206ENST00000489131 CHMLP26374 656 aa15.62■□□□□ 0.09
TOP3A-206ENST00000489131 ADORA1P30542 326 aa15.62■□□□□ 0.09
TOP3A-206ENST00000489131 RBM19Q9Y4C8 960 aaKnown RBP15.62■□□□□ 0.09
TOP3A-206ENST00000489131 AKAP11Q9UKA4 1901 aa15.62■□□□□ 0.09
TOP3A-206ENST00000489131 ZNF804BA4D1E1 1349 aa15.62■□□□□ 0.09
TOP3A-206ENST00000489131 TRIM6-TRIM34B2RNG4 842 aa15.61■□□□□ 0.09
TOP3A-206ENST00000489131 IFIT1P09914 478 aaKnown RBP15.61■□□□□ 0.09
TOP3A-206ENST00000489131 MSL1Q68DK7 614 aa15.61■□□□□ 0.09
TOP3A-206ENST00000489131 C15orf52Q6ZUT6 534 aaKnown RBP15.61■□□□□ 0.09
TOP3A-206ENST00000489131 BCL11AQ9H165 835 aa15.61■□□□□ 0.09
TOP3A-206ENST00000489131 SNRKQ9NRH2 765 aa15.61■□□□□ 0.09
TOP3A-206ENST00000489131 IRS2Q9Y4H2 1338 aa15.61■□□□□ 0.09
TOP3A-206ENST00000489131 HIP1O00291 1037 aa15.6■□□□□ 0.09
TOP3A-206ENST00000489131 UQCRFS1P1P0C7P4 283 aa15.6■□□□□ 0.09
TOP3A-206ENST00000489131 PDGFDQ9GZP0 370 aaPredicted RBP15.6■□□□□ 0.09
TOP3A-206ENST00000489131 BOLA2Q9H3K6 86 aa15.6■□□□□ 0.09
TOP3A-206ENST00000489131 PODXL2Q9NZ53 605 aa15.6■□□□□ 0.09
TOP3A-206ENST00000489131 TAF5LO75529 589 aa15.59■□□□□ 0.09
TOP3A-206ENST00000489131 CCDC102BQ68D86 513 aa15.59■□□□□ 0.09
TOP3A-206ENST00000489131 STYK1Q6J9G0 422 aa15.59■□□□□ 0.09
TOP3A-206ENST00000489131 HELBQ8NG08 1087 aaPredicted RBP15.59■□□□□ 0.09
TOP3A-206ENST00000489131 RILPL2Q969X0 211 aa15.59■□□□□ 0.09
TOP3A-206ENST00000489131 MASTLQ96GX5 879 aa15.59■□□□□ 0.09
TOP3A-206ENST00000489131 LEMD3Q9Y2U8 911 aa15.59■□□□□ 0.09
TOP3A-206ENST00000489131 PDS5AQ29RF7 1337 aaKnown RBP15.59■□□□□ 0.09
TOP3A-206ENST00000489131 ALDH1B1P30837 517 aa15.58■□□□□ 0.08
TOP3A-206ENST00000489131 TTC39AQ5SRH9 613 aa15.58■□□□□ 0.08
TOP3A-206ENST00000489131 GORABQ5T7V8 394 aa15.58■□□□□ 0.08
TOP3A-206ENST00000489131 SP8Q8IXZ3 490 aa15.58■□□□□ 0.08
TOP3A-206ENST00000489131 KBTBD3Q8NAB2 608 aa15.58■□□□□ 0.08
TOP3A-206ENST00000489131 TBC1D32Q96NH3 1257 aa15.58■□□□□ 0.08
TOP3A-206ENST00000489131 ESYT1Q9BSJ8 1104 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms