RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CLEC11AQ9Y240 323 aa31.77■■■□□ 2.68
HMGN1-217ENST00000489072 CSF1RP07333 972 aa31.76■■■□□ 2.67
HMGN1-217ENST00000489072 GMPSP49915 693 aaPredicted RBP31.76■■■□□ 2.67
HMGN1-217ENST00000489072 FAM161AQ3B820 660 aa31.76■■■□□ 2.67
HMGN1-217ENST00000489072 GPRC5DQ9NZD1 345 aa31.76■■■□□ 2.67
HMGN1-217ENST00000489072 GGA1Q9UJY5 639 aa31.76■■■□□ 2.67
HMGN1-217ENST00000489072 TNIP1Q15025 636 aa31.75■■■□□ 2.67
HMGN1-217ENST00000489072 DOK7Q18PE1 504 aa31.75■■■□□ 2.67
HMGN1-217ENST00000489072 SSH1Q8WYL5 1049 aa31.75■■■□□ 2.67
HMGN1-217ENST00000489072 BSDC1Q9NW68 430 aaPredicted RBP31.75■■■□□ 2.67
HMGN1-217ENST00000489072 SCN9AQ15858 1988 aa31.75■■■□□ 2.67
HMGN1-217ENST00000489072 XDHP47989 1333 aa31.75■■■□□ 2.67
HMGN1-217ENST00000489072 PASKQ96RG2 1323 aa31.75■■■□□ 2.67
HMGN1-217ENST00000489072 MINPP1Q9UNW1 487 aa31.74■■■□□ 2.67
HMGN1-217ENST00000489072 ECE2O60344 883 aa31.73■■■□□ 2.67
HMGN1-217ENST00000489072 ITGBL1O95965 494 aaPredicted RBP31.73■■■□□ 2.67
HMGN1-217ENST00000489072 ITGA6P23229 1130 aa31.73■■■□□ 2.67
HMGN1-217ENST00000489072 SLC4A10Q6U841 1118 aa31.73■■■□□ 2.67
HMGN1-217ENST00000489072 ZC3H12CQ9C0D7 883 aaKnown RBP31.73■■■□□ 2.67
HMGN1-217ENST00000489072 WTIPA6NIX2 430 aaPredicted RBP31.72■■■□□ 2.67
HMGN1-217ENST00000489072 FOXO4P98177 505 aa31.72■■■□□ 2.67
HMGN1-217ENST00000489072 MAP1SQ66K74 1059 aaPredicted RBP31.72■■■□□ 2.67
HMGN1-217ENST00000489072 DIEXFQ68CQ4 756 aaKnown RBP31.72■■■□□ 2.67
HMGN1-217ENST00000489072 MIER1Q8N108 512 aa31.72■■■□□ 2.67
HMGN1-217ENST00000489072 KLRG1Q96E93 195 aa31.72■■■□□ 2.67
HMGN1-217ENST00000489072 KCNQ5Q9NR82 932 aa31.72■■■□□ 2.67
HMGN1-217ENST00000489072 GRM8O00222 908 aa31.71■■■□□ 2.67
HMGN1-217ENST00000489072 ALDH1L1O75891 902 aa31.71■■■□□ 2.67
HMGN1-217ENST00000489072 PSMD14O00487 310 aa31.7■■■□□ 2.67
HMGN1-217ENST00000489072 USP50Q70EL3 339 aaPredicted RBP31.7■■■□□ 2.67
HMGN1-217ENST00000489072 BCL2L13Q9BXK5 485 aa31.7■■■□□ 2.67
HMGN1-217ENST00000489072 SRCIN1Q9C0H9 1055 aa31.7■■■□□ 2.67
HMGN1-217ENST00000489072 ADARB2Q9NS39 739 aaKnown RBP31.7■■■□□ 2.67
HMGN1-217ENST00000489072 ATP2B4P23634 1241 aa31.69■■■□□ 2.66
HMGN1-217ENST00000489072 IGHMBP2P38935 993 aaKnown RBP31.69■■■□□ 2.66
HMGN1-217ENST00000489072 EPHA10Q5JZY3 1008 aa31.69■■■□□ 2.66
HMGN1-217ENST00000489072 CNTROBQ8N137 903 aa31.69■■■□□ 2.66
HMGN1-217ENST00000489072 SHTN1A0MZ66 631 aa31.68■■■□□ 2.66
HMGN1-217ENST00000489072 ZBTB12Q9Y330 459 aaPredicted RBP31.68■■■□□ 2.66
HMGN1-217ENST00000489072 C9orf78Q9NZ63 289 aaPredicted RBP31.67■■■□□ 2.66
HMGN1-217ENST00000489072 PTPRCP08575 1304 aa31.67■■■□□ 2.66
HMGN1-217ENST00000489072 PSME4Q14997 1843 aa31.66■■■□□ 2.66
HMGN1-217ENST00000489072 CREBZFQ9NS37 354 aa31.66■■■□□ 2.66
HMGN1-217ENST00000489072 CCT4P50991 539 aaKnown RBP31.65■■■□□ 2.66
HMGN1-217ENST00000489072 ALDH1L2Q3SY69 923 aa31.65■■■□□ 2.66
HMGN1-217ENST00000489072 CNOT7Q9UIV1 285 aaKnown RBP31.65■■■□□ 2.66
HMGN1-217ENST00000489072 PCNTO95613 3336 aa31.65■■■□□ 2.66
HMGN1-217ENST00000489072 ANKRD18BA2A2Z9 1011 aa31.64■■■□□ 2.66
HMGN1-217ENST00000489072 LMBR1LQ6UX01 489 aa31.64■■■□□ 2.66
HMGN1-217ENST00000489072 MPHOSPH8Q99549 860 aa31.64■■■□□ 2.66
HMGN1-217ENST00000489072 G3V3G9 751 aa31.63■■■□□ 2.65
HMGN1-217ENST00000489072 DCAF8Q5TAQ9 597 aa31.63■■■□□ 2.65
HMGN1-217ENST00000489072 MICALL2Q8IY33 904 aa31.63■■■□□ 2.65
HMGN1-217ENST00000489072 TRPM4Q8TD43 1214 aa31.63■■■□□ 2.65
HMGN1-217ENST00000489072 DPF2Q92785 391 aa31.63■■■□□ 2.65
HMGN1-217ENST00000489072 CHMP3Q9Y3E7 222 aa31.63■■■□□ 2.65
HMGN1-217ENST00000489072 A0A1B0GUL6 1792 aa31.63■■■□□ 2.65
HMGN1-217ENST00000489072 HIRAP54198 1017 aaPredicted RBP31.62■■■□□ 2.65
HMGN1-217ENST00000489072 IFIT5Q13325 482 aaKnown RBP31.62■■■□□ 2.65
HMGN1-217ENST00000489072 SMC4Q9NTJ3 1288 aa31.62■■■□□ 2.65
HMGN1-217ENST00000489072 MED23Q9ULK4 1368 aa31.62■■■□□ 2.65
HMGN1-217ENST00000489072 UTYO14607 1347 aa31.61■■■□□ 2.65
HMGN1-217ENST00000489072 NBPF7P0C2Y1 421 aaPredicted RBP31.61■■■□□ 2.65
HMGN1-217ENST00000489072 JMYQ8N9B5 988 aa31.61■■■□□ 2.65
HMGN1-217ENST00000489072 KAZALD1Q96I82 304 aa31.61■■■□□ 2.65
HMGN1-217ENST00000489072 SUCLG2Q96I99 432 aa31.61■■■□□ 2.65
HMGN1-217ENST00000489072 VIL1P09327 827 aaKnown RBP31.6■■■□□ 2.65
HMGN1-217ENST00000489072 CT47B1P0C2W7 299 aaPredicted RBP31.6■■■□□ 2.65
HMGN1-217ENST00000489072 H7C1D1 291 aa31.59■■■□□ 2.65
HMGN1-217ENST00000489072 RPS12P25398 132 aaKnown RBP31.59■■■□□ 2.65
HMGN1-217ENST00000489072 FMR1Q06787 632 aaKnown RBP eCLIP31.59■■■□□ 2.652e-6■□□□□ 10.3
HMGN1-217ENST00000489072 CHRNDQ07001 517 aa31.59■■■□□ 2.65
HMGN1-217ENST00000489072 ANKRD2Q9GZV1 360 aa31.59■■■□□ 2.65
HMGN1-217ENST00000489072 LEMD3Q9Y2U8 911 aa31.59■■■□□ 2.65
HMGN1-217ENST00000489072 TMEM88BA6NKF7 163 aa31.58■■■□□ 2.65
HMGN1-217ENST00000489072 TXNRD3Q86VQ6 643 aa31.58■■■□□ 2.65
HMGN1-217ENST00000489072 TRPM7Q96QT4 1865 aa31.57■■■□□ 2.64
HMGN1-217ENST00000489072 ZNF804BA4D1E1 1349 aa31.57■■■□□ 2.64
HMGN1-217ENST00000489072 ZNF646O15015 1829 aaPredicted RBP31.57■■■□□ 2.64
HMGN1-217ENST00000489072 ZNF594Q96JF6 807 aaPredicted RBP31.57■■■□□ 2.64
HMGN1-217ENST00000489072 PGAP2Q9UHJ9 254 aa31.57■■■□□ 2.64
HMGN1-217ENST00000489072 KLRK1P26718 216 aa31.56■■■□□ 2.64
HMGN1-217ENST00000489072 SAMD7Q7Z3H4 446 aa31.56■■■□□ 2.64
HMGN1-217ENST00000489072 PODNQ7Z5L7 613 aa31.56■■■□□ 2.64
HMGN1-217ENST00000489072 MKRN1Q9UHC7 482 aaKnown RBP31.56■■■□□ 2.64
HMGN1-217ENST00000489072 TRAF5O00463 557 aa31.55■■■□□ 2.64
HMGN1-217ENST00000489072 EGFRP00533 1210 aa31.55■■■□□ 2.64
HMGN1-217ENST00000489072 CCDC57Q2TAC2 916 aa31.55■■■□□ 2.64
HMGN1-217ENST00000489072 ZNF609O15014 1411 aa31.55■■■□□ 2.64
HMGN1-217ENST00000489072 SNAP23O00161 211 aa31.54■■■□□ 2.64
HMGN1-217ENST00000489072 TBC1D10BQ4KMP7 808 aaPredicted RBP31.54■■■□□ 2.64
HMGN1-217ENST00000489072 RSBN1LQ6PCB5 846 aaPredicted RBP31.54■■■□□ 2.64
HMGN1-217ENST00000489072 HELBQ8NG08 1087 aaPredicted RBP31.54■■■□□ 2.64
HMGN1-217ENST00000489072 TAF5LO75529 589 aa31.53■■■□□ 2.64
HMGN1-217ENST00000489072 ZC3H15Q8WU90 426 aaKnown RBP31.53■■■□□ 2.64
HMGN1-217ENST00000489072 POLR2AP24928 1970 aaKnown RBP31.52■■■□□ 2.64
HMGN1-217ENST00000489072 USP17L3A6NCW0 530 aa31.52■■■□□ 2.64
HMGN1-217ENST00000489072 USP17L4A6NCW7 530 aa31.52■■■□□ 2.64
HMGN1-217ENST00000489072 USP17L1Q7RTZ2 530 aa31.52■■■□□ 2.64
HMGN1-217ENST00000489072 GLIS2Q9BZE0 524 aaPredicted RBP31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms