RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 MICALL2Q8IY33 904 aa15.92■□□□□ 0.14
SREBF1-215ENST00000487401 FAM9BQ8IZU0 186 aa15.92■□□□□ 0.14
SREBF1-215ENST00000487401 ZC3H15Q8WU90 426 aaKnown RBP15.92■□□□□ 0.14
SREBF1-215ENST00000487401 DPF2Q92785 391 aa15.92■□□□□ 0.14
SREBF1-215ENST00000487401 CDC5LQ99459 802 aaKnown RBP15.92■□□□□ 0.14
SREBF1-215ENST00000487401 RPS12P25398 132 aaKnown RBP15.91■□□□□ 0.14
SREBF1-215ENST00000487401 FKBP5Q13451 457 aaPredicted RBP15.91■□□□□ 0.14
SREBF1-215ENST00000487401 PAXIP1Q6ZW49 1069 aaPredicted RBP15.91■□□□□ 0.14
SREBF1-215ENST00000487401 TNS4Q8IZW8 715 aa15.91■□□□□ 0.14
SREBF1-215ENST00000487401 TRPM4Q8TD43 1214 aa15.91■□□□□ 0.14
SREBF1-215ENST00000487401 PGAP2Q9UHJ9 254 aa15.91■□□□□ 0.14
SREBF1-215ENST00000487401 H7C1W4 665 aa15.9■□□□□ 0.14
SREBF1-215ENST00000487401 VAMP4O75379 141 aa15.9■□□□□ 0.14
SREBF1-215ENST00000487401 HIRAP54198 1017 aaPredicted RBP15.9■□□□□ 0.14
SREBF1-215ENST00000487401 EXOSC9Q06265 439 aaKnown RBP15.9■□□□□ 0.14
SREBF1-215ENST00000487401 UBE3BQ7Z3V4 1068 aa15.9■□□□□ 0.14
SREBF1-215ENST00000487401 TTLL11Q8NHH1 800 aa15.9■□□□□ 0.14
SREBF1-215ENST00000487401 MYH16Q9H6N6 1097 aa15.9■□□□□ 0.14
SREBF1-215ENST00000487401 KCNQ5Q9NR82 932 aa15.9■□□□□ 0.14
SREBF1-215ENST00000487401 XDHP47989 1333 aa15.9■□□□□ 0.14
SREBF1-215ENST00000487401 WDR33Q9C0J8 1336 aaKnown RBP15.9■□□□□ 0.14
SREBF1-215ENST00000487401 SHTN1A0MZ66 631 aa15.89■□□□□ 0.13
SREBF1-215ENST00000487401 CELF2O95319 508 aaKnown RBP15.89■□□□□ 0.13
SREBF1-215ENST00000487401 ATP2B4P23634 1241 aa15.89■□□□□ 0.13
SREBF1-215ENST00000487401 GCKRQ14397 625 aa15.89■□□□□ 0.13
SREBF1-215ENST00000487401 RBM26Q5T8P6 1007 aaKnown RBP15.89■□□□□ 0.13
SREBF1-215ENST00000487401 CST9Q5W186 159 aa15.89■□□□□ 0.13
SREBF1-215ENST00000487401 CDC37L1Q7L3B6 337 aa15.89■□□□□ 0.13
SREBF1-215ENST00000487401 DNAAF4Q8WXU2 420 aa15.89■□□□□ 0.13
SREBF1-215ENST00000487401 GLIS2Q9BZE0 524 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-215ENST00000487401 GREM2Q9H772 168 aa15.89■□□□□ 0.13
SREBF1-215ENST00000487401 VIL1P09327 827 aaKnown RBP15.88■□□□□ 0.13
SREBF1-215ENST00000487401 ECE1P42892 770 aa15.88■□□□□ 0.13
SREBF1-215ENST00000487401 TBC1D10BQ4KMP7 808 aaPredicted RBP15.88■□□□□ 0.13
SREBF1-215ENST00000487401 SAMD7Q7Z3H4 446 aa15.88■□□□□ 0.13
SREBF1-215ENST00000487401 BSDC1Q9NW68 430 aaPredicted RBP15.88■□□□□ 0.13
SREBF1-215ENST00000487401 ANKRD36CQ5JPF3 1778 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 PCNTO95613 3336 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 FOXN1O15353 648 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 IGHMBP2P38935 993 aaKnown RBP15.87■□□□□ 0.13
SREBF1-215ENST00000487401 CTCFP49711 727 aaPredicted RBP15.87■□□□□ 0.13
SREBF1-215ENST00000487401 MAP2K1Q02750 393 aaPredicted RBP15.87■□□□□ 0.13
SREBF1-215ENST00000487401 GRM1Q13255 1194 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 USP48Q86UV5 1035 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 LINS1Q8NG48 757 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 ZNF408Q9H9D4 720 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 WBP1LQ9NX94 342 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 MINPP1Q9UNW1 487 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 TLL2Q9Y6L7 1015 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 RTL9Q8NET4 1388 aa15.87■□□□□ 0.13
SREBF1-215ENST00000487401 CAPNS2Q96L46 248 aa15.86■□□□□ 0.13
SREBF1-215ENST00000487401 PLA2G12BQ9BX93 195 aa15.86■□□□□ 0.13
SREBF1-215ENST00000487401 DUOX1Q9NRD9 1551 aa15.86■□□□□ 0.13
SREBF1-215ENST00000487401 LTBP1Q14766 1721 aa15.85■□□□□ 0.13
SREBF1-215ENST00000487401 ADAMTSL1Q8N6G6 1762 aa15.85■□□□□ 0.13
SREBF1-215ENST00000487401 CYP4F22Q6NT55 531 aa15.85■□□□□ 0.13
SREBF1-215ENST00000487401 PODNQ7Z5L7 613 aa15.85■□□□□ 0.13
SREBF1-215ENST00000487401 DCPSQ96C86 337 aaKnown RBP15.85■□□□□ 0.13
SREBF1-215ENST00000487401 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
SREBF1-215ENST00000487401 ITGA6P23229 1130 aa15.84■□□□□ 0.13
SREBF1-215ENST00000487401 RSBN1LQ6PCB5 846 aaPredicted RBP15.84■□□□□ 0.13
SREBF1-215ENST00000487401 KRT26Q7Z3Y9 468 aa15.84■□□□□ 0.13
SREBF1-215ENST00000487401 AGBL3Q8NEM8 1001 aa15.84■□□□□ 0.13
SREBF1-215ENST00000487401 MPHOSPH8Q99549 860 aa15.84■□□□□ 0.13
SREBF1-215ENST00000487401 BEGAINQ9BUH8 593 aa15.84■□□□□ 0.13
SREBF1-215ENST00000487401 USP17L3A6NCW0 530 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 USP17L4A6NCW7 530 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 F6X3S4 739 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 CAPN15O75808 1086 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 EGFRP00533 1210 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 CSF1RP07333 972 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 CCT4P50991 539 aaKnown RBP15.83■□□□□ 0.12
SREBF1-215ENST00000487401 CASP7P55210 303 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 KIF4BQ2VIQ3 1234 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 USP17L1Q7RTZ2 530 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 SAPCD2Q86UD0 394 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 ANKRD2Q9GZV1 360 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 PRDM10Q9NQV6 1147 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 LEMD3Q9Y2U8 911 aa15.83■□□□□ 0.12
SREBF1-215ENST00000487401 DDX60Q8IY21 1712 aaKnown RBP15.82■□□□□ 0.12
SREBF1-215ENST00000487401 FAM161AQ3B820 660 aa15.82■□□□□ 0.12
SREBF1-215ENST00000487401 BEND3Q5T5X7 828 aa15.82■□□□□ 0.12
SREBF1-215ENST00000487401 ANKRD18BA2A2Z9 1011 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 WTIPA6NIX2 430 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-215ENST00000487401 COL4A1P02462 1669 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 USP17L8P0C7I0 530 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 MAP2K2P36507 400 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 KCNJ4P48050 445 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 LBX1P52954 281 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 LAMB2P55268 1798 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 ZNF280AP59817 542 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-215ENST00000487401 SULF1Q8IWU6 871 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 FBXW7Q969H0 707 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 HHIPL1Q96JK4 782 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 CHMP3Q9Y3E7 222 aa15.81■□□□□ 0.12
SREBF1-215ENST00000487401 MED23Q9ULK4 1368 aa15.8■□□□□ 0.12
SREBF1-215ENST00000487401 ZNF804BA4D1E1 1349 aa15.8■□□□□ 0.12
SREBF1-215ENST00000487401 AOC2O75106 756 aa15.8■□□□□ 0.12
SREBF1-215ENST00000487401 IFIT5Q13325 482 aaKnown RBP15.8■□□□□ 0.12
SREBF1-215ENST00000487401 SCARF1Q14162 830 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms