RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 TMEM130Q8N3G9 435 aa5.73□□□□□ -1.49
KDM1A-204ENST00000481879 IL22RA1Q8N6P7 574 aa5.73□□□□□ -1.49
KDM1A-204ENST00000481879 MRPL18Q9H0U6 180 aaKnown RBP5.73□□□□□ -1.49
KDM1A-204ENST00000481879 ALX3O95076 343 aa5.72□□□□□ -1.49
KDM1A-204ENST00000481879 GDF6Q6KF10 455 aaPredicted RBP5.72□□□□□ -1.49
KDM1A-204ENST00000481879 KRTAP5-3Q6L8H2 238 aa5.72□□□□□ -1.49
KDM1A-204ENST00000481879 RBSNQ9H1K0 784 aa5.72□□□□□ -1.49
KDM1A-204ENST00000481879 RNF114Q9Y508 228 aa5.72□□□□□ -1.49
KDM1A-204ENST00000481879 KCNMB2Q9Y691 235 aa5.72□□□□□ -1.49
KDM1A-204ENST00000481879 F8W735 103 aaPredicted RBP5.71□□□□□ -1.5
KDM1A-204ENST00000481879 MMP20O60882 483 aa5.71□□□□□ -1.5
KDM1A-204ENST00000481879 RFX1P22670 979 aa5.71□□□□□ -1.5
KDM1A-204ENST00000481879 COX20Q5RI15 118 aa5.71□□□□□ -1.5
KDM1A-204ENST00000481879 MAP4K3Q8IVH8 894 aa5.71□□□□□ -1.5
KDM1A-204ENST00000481879 DCAF11Q8TEB1 546 aa5.71□□□□□ -1.5
KDM1A-204ENST00000481879 NSUN5Q96P11 429 aaKnown RBP5.71□□□□□ -1.5
KDM1A-204ENST00000481879 SRA1Q9HD15 236 aaKnown RBP5.71□□□□□ -1.5
KDM1A-204ENST00000481879 HOXD8P13378 290 aaPredicted RBP5.7□□□□□ -1.5
KDM1A-204ENST00000481879 FSTP19883 344 aa5.7□□□□□ -1.5
KDM1A-204ENST00000481879 SOX18P35713 384 aa5.7□□□□□ -1.5
KDM1A-204ENST00000481879 IRAK1P51617 712 aa5.7□□□□□ -1.5
KDM1A-204ENST00000481879 CDCA8Q53HL2 280 aa5.7□□□□□ -1.5
KDM1A-204ENST00000481879 CFAP70Q5T0N1 1121 aa5.7□□□□□ -1.5
KDM1A-204ENST00000481879 CACTIN-AS1Q8N1I8 211 aa5.7□□□□□ -1.5
KDM1A-204ENST00000481879 BRD2P25440 801 aaKnown RBP5.69□□□□□ -1.5
KDM1A-204ENST00000481879 JAG1P78504 1218 aa5.69□□□□□ -1.5
KDM1A-204ENST00000481879 FKBP5Q13451 457 aaPredicted RBP5.69□□□□□ -1.5
KDM1A-204ENST00000481879 SETDB1Q15047 1291 aa5.69□□□□□ -1.5
KDM1A-204ENST00000481879 TMEM132AQ24JP5 1023 aa5.69□□□□□ -1.5
KDM1A-204ENST00000481879 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
KDM1A-204ENST00000481879 NLRP13Q86W25 1043 aa5.69□□□□□ -1.5
KDM1A-204ENST00000481879 PRIMPOLQ96LW4 560 aa5.69□□□□□ -1.5
KDM1A-204ENST00000481879 MUC3BQ9H195 1237 aa5.69□□□□□ -1.5
KDM1A-204ENST00000481879 NOVA2Q9UNW9 492 aaKnown RBP5.69□□□□□ -1.5
KDM1A-204ENST00000481879 TAL1P17542 331 aaPredicted RBP5.68□□□□□ -1.5
KDM1A-204ENST00000481879 ETFBKMTQ8IXQ9 262 aa5.68□□□□□ -1.5
KDM1A-204ENST00000481879 PCMTD2Q9NV79 361 aa5.68□□□□□ -1.5
KDM1A-204ENST00000481879 TRIM33Q9UPN9 1127 aa5.68□□□□□ -1.5
KDM1A-204ENST00000481879 PPME1Q9Y570 386 aa5.68□□□□□ -1.5
KDM1A-204ENST00000481879 GLB1P16278 677 aa5.67□□□□□ -1.5
KDM1A-204ENST00000481879 SWI5Q1ZZU3 235 aa5.67□□□□□ -1.5
KDM1A-204ENST00000481879 C16orf46Q6P387 395 aa5.67□□□□□ -1.5
KDM1A-204ENST00000481879 Q6ZS46 218 aa5.67□□□□□ -1.5
KDM1A-204ENST00000481879 ZNF777Q9ULD5 760 aaPredicted RBP5.67□□□□□ -1.5
KDM1A-204ENST00000481879 UBAP1LF5GYI3 381 aa5.66□□□□□ -1.5
KDM1A-204ENST00000481879 PRMT3O60678 531 aa5.66□□□□□ -1.5
KDM1A-204ENST00000481879 PTCD1O75127 700 aaKnown RBP5.66□□□□□ -1.5
KDM1A-204ENST00000481879 SSTR4P31391 388 aa5.66□□□□□ -1.5
KDM1A-204ENST00000481879 AGGF1Q8N302 714 aaeCLIP5.66□□□□□ -1.5
KDM1A-204ENST00000481879 OR13H1Q8NG92 308 aa5.66□□□□□ -1.5
KDM1A-204ENST00000481879 PIK3R5Q8WYR1 880 aa5.66□□□□□ -1.5
KDM1A-204ENST00000481879 SAP130Q9H0E3 1048 aa5.66□□□□□ -1.5
KDM1A-204ENST00000481879 FAM13BQ9NYF5 915 aa5.66□□□□□ -1.5
KDM1A-204ENST00000481879 RAXQ9Y2V3 346 aa5.66□□□□□ -1.5
KDM1A-204ENST00000481879 ACIN1Q9UKV3 1341 aaKnown RBP5.66□□□□□ -1.5
KDM1A-204ENST00000481879 LINC01387J3KSC0 135 aa5.65□□□□□ -1.5
KDM1A-204ENST00000481879 GSC2O15499 205 aa5.65□□□□□ -1.5
KDM1A-204ENST00000481879 HYAL2Q12891 473 aa5.65□□□□□ -1.5
KDM1A-204ENST00000481879 TRIP4Q15650 581 aaPredicted RBP5.65□□□□□ -1.5
KDM1A-204ENST00000481879 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.65□□□□□ -1.5
KDM1A-204ENST00000481879 GALNT11Q8NCW6 608 aa5.65□□□□□ -1.5
KDM1A-204ENST00000481879 COL26A1Q96A83 441 aa5.65□□□□□ -1.5
KDM1A-204ENST00000481879 SPACA7Q96KW9 195 aa5.65□□□□□ -1.5
KDM1A-204ENST00000481879 STOML1Q9UBI4 398 aa5.65□□□□□ -1.5
KDM1A-204ENST00000481879 IGLV1-40P01703 118 aa5.64□□□□□ -1.51
KDM1A-204ENST00000481879 ELOAQ14241 798 aaKnown RBP5.64□□□□□ -1.51
KDM1A-204ENST00000481879 OCLNQ16625 522 aa5.64□□□□□ -1.51
KDM1A-204ENST00000481879 FAM26DQ5JW98 314 aa5.64□□□□□ -1.51
KDM1A-204ENST00000481879 COL13A1Q5TAT6 717 aaPredicted RBP5.64□□□□□ -1.51
KDM1A-204ENST00000481879 TTC39BQ5VTQ0 682 aaPredicted RBP5.64□□□□□ -1.51
KDM1A-204ENST00000481879 CEP135Q66GS9 1140 aa5.64□□□□□ -1.51
KDM1A-204ENST00000481879 UBL7Q96S82 380 aaPredicted RBP5.64□□□□□ -1.51
KDM1A-204ENST00000481879 FNDC3AQ9Y2H6 1198 aaKnown RBP5.64□□□□□ -1.51
KDM1A-204ENST00000481879 TNFRSF10BO14763 440 aa5.63□□□□□ -1.51
KDM1A-204ENST00000481879 DHX15O43143 795 aaKnown RBP5.63□□□□□ -1.51
KDM1A-204ENST00000481879 SMNDC1O75940 238 aaKnown RBP eCLIP5.63□□□□□ -1.51
KDM1A-204ENST00000481879 CDC27P30260 824 aa5.63□□□□□ -1.51
KDM1A-204ENST00000481879 CD68P34810 354 aaPredicted RBP5.63□□□□□ -1.51
KDM1A-204ENST00000481879 SCNN1AP37088 669 aa5.63□□□□□ -1.51
KDM1A-204ENST00000481879 CD97P48960 835 aa5.63□□□□□ -1.51
KDM1A-204ENST00000481879 ATP11AP98196 1134 aa5.63□□□□□ -1.51
KDM1A-204ENST00000481879 CEP41Q9BYV8 373 aa5.63□□□□□ -1.51
KDM1A-204ENST00000481879 LACRTQ9GZZ8 138 aa5.63□□□□□ -1.51
KDM1A-204ENST00000481879 ZAP70P43403 619 aa5.62□□□□□ -1.51
KDM1A-204ENST00000481879 FAM69CQ0P6D2 419 aa5.62□□□□□ -1.51
KDM1A-204ENST00000481879 NAA30Q147X3 362 aaPredicted RBP5.62□□□□□ -1.51
KDM1A-204ENST00000481879 TXNDC11Q6PKC3 985 aa5.62□□□□□ -1.51
KDM1A-204ENST00000481879 ACAD11Q709F0 780 aa5.62□□□□□ -1.51
KDM1A-204ENST00000481879 ARMC10Q8N2F6 343 aa5.62□□□□□ -1.51
KDM1A-204ENST00000481879 ZMIZ1Q9ULJ6 1067 aa5.62□□□□□ -1.51
KDM1A-204ENST00000481879 WISP1O95388 367 aa5.61□□□□□ -1.51
KDM1A-204ENST00000481879 MED26O95402 600 aa5.61□□□□□ -1.51
KDM1A-204ENST00000481879 CDC25BP30305 580 aa5.61□□□□□ -1.51
KDM1A-204ENST00000481879 FAM117BQ6P1L5 589 aa5.61□□□□□ -1.51
KDM1A-204ENST00000481879 CAPN12Q6ZSI9 719 aa5.61□□□□□ -1.51
KDM1A-204ENST00000481879 KLHL23Q8NBE8 558 aa5.61□□□□□ -1.51
KDM1A-204ENST00000481879 GPR152Q8TDT2 470 aa5.61□□□□□ -1.51
KDM1A-204ENST00000481879 MKNK1Q9BUB5 465 aa5.61□□□□□ -1.51
KDM1A-204ENST00000481879 RASSF4Q9H2L5 321 aa5.61□□□□□ -1.51
KDM1A-204ENST00000481879 KCNK4Q9NYG8 393 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms