RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 EYA3Q99504 573 aa22.73■■□□□ 1.23
RXRB-203ENST00000481441 ISCA1Q9BUE6 129 aa22.73■■□□□ 1.23
RXRB-203ENST00000481441 GGA3Q9NZ52 723 aa22.73■■□□□ 1.23
RXRB-203ENST00000481441 ASTN2O75129 1339 aaPredicted RBP22.72■■□□□ 1.23
RXRB-203ENST00000481441 KRT24Q2M2I5 525 aa22.72■■□□□ 1.23
RXRB-203ENST00000481441 CTU1Q7Z7A3 348 aaKnown RBP22.72■■□□□ 1.23
RXRB-203ENST00000481441 PLBD2Q8NHP8 589 aa22.72■■□□□ 1.23
RXRB-203ENST00000481441 TBC1D16Q8TBP0 767 aa22.72■■□□□ 1.23
RXRB-203ENST00000481441 VIL1P09327 827 aaKnown RBP22.71■■□□□ 1.23
RXRB-203ENST00000481441 CDCA5Q96FF9 252 aa22.71■■□□□ 1.23
RXRB-203ENST00000481441 CHPF2Q9P2E5 772 aa22.71■■□□□ 1.23
RXRB-203ENST00000481441 PSME4Q14997 1843 aa22.7■■□□□ 1.22
RXRB-203ENST00000481441 TMPOP42166 694 aaKnown RBP22.69■■□□□ 1.22
RXRB-203ENST00000481441 ANKRD13DQ6ZTN6 518 aa22.69■■□□□ 1.22
RXRB-203ENST00000481441 RASAL3Q86YV0 1011 aa22.69■■□□□ 1.22
RXRB-203ENST00000481441 REM2Q8IYK8 340 aaPredicted RBP22.69■■□□□ 1.22
RXRB-203ENST00000481441 ZNF609O15014 1411 aa22.69■■□□□ 1.22
RXRB-203ENST00000481441 ATP5J2-PTCD1G3V325 749 aa22.68■■□□□ 1.22
RXRB-203ENST00000481441 CHL1O00533 1208 aa22.68■■□□□ 1.22
RXRB-203ENST00000481441 RPS8P62241 208 aaKnown RBP22.68■■□□□ 1.22
RXRB-203ENST00000481441 LMOD3Q0VAK6 560 aa22.68■■□□□ 1.22
RXRB-203ENST00000481441 ZC3H12CQ9C0D7 883 aaKnown RBP22.68■■□□□ 1.22
RXRB-203ENST00000481441 PAPPA2Q9BXP8 1791 aa22.67■■□□□ 1.22
RXRB-203ENST00000481441 ZNF280AP59817 542 aaPredicted RBP22.67■■□□□ 1.22
RXRB-203ENST00000481441 PRPF38BQ5VTL8 546 aaKnown RBP22.67■■□□□ 1.22
RXRB-203ENST00000481441 PODXL2Q9NZ53 605 aa22.67■■□□□ 1.22
RXRB-203ENST00000481441 RTL5Q5HYW3 569 aaPredicted RBP22.66■■□□□ 1.22
RXRB-203ENST00000481441 ANGEL2Q5VTE6 544 aaKnown RBP22.66■■□□□ 1.22
RXRB-203ENST00000481441 IRS4O14654 1257 aaPredicted RBP22.65■■□□□ 1.22
RXRB-203ENST00000481441 FKBP1BP68106 108 aa22.65■■□□□ 1.22
RXRB-203ENST00000481441 TRIM28Q13263 835 aaKnown RBP22.65■■□□□ 1.22
RXRB-203ENST00000481441 SCARF1Q14162 830 aa22.65■■□□□ 1.22
RXRB-203ENST00000481441 HDGFL1Q5TGJ6 251 aa22.65■■□□□ 1.22
RXRB-203ENST00000481441 HPS5Q9UPZ3 1129 aa22.65■■□□□ 1.22
RXRB-203ENST00000481441 AGBL3Q8NEM8 1001 aa22.64■■□□□ 1.22
RXRB-203ENST00000481441 RSBN1LQ6PCB5 846 aaPredicted RBP22.63■■□□□ 1.21
RXRB-203ENST00000481441 SEC31BQ9NQW1 1179 aa22.63■■□□□ 1.21
RXRB-203ENST00000481441 DBF4Q9UBU7 674 aaPredicted RBP22.63■■□□□ 1.21
RXRB-203ENST00000481441 UFL1O94874 794 aa22.62■■□□□ 1.21
RXRB-203ENST00000481441 HOXB7P09629 217 aa22.62■■□□□ 1.21
RXRB-203ENST00000481441 GMLQ99445 158 aa22.62■■□□□ 1.21
RXRB-203ENST00000481441 G3V3G9 751 aa22.61■■□□□ 1.21
RXRB-203ENST00000481441 PKN2Q16513 984 aaKnown RBP22.61■■□□□ 1.21
RXRB-203ENST00000481441 DCAF8Q5TAQ9 597 aa22.61■■□□□ 1.21
RXRB-203ENST00000481441 ANKIB1Q9P2G1 1089 aa22.61■■□□□ 1.21
RXRB-203ENST00000481441 GGA1Q9UJY5 639 aa22.61■■□□□ 1.21
RXRB-203ENST00000481441 PITPNM2Q9BZ72 1349 aa22.61■■□□□ 1.21
RXRB-203ENST00000481441 MOB2Q70IA6 237 aa22.6■■□□□ 1.21
RXRB-203ENST00000481441 MYOZ2Q9NPC6 264 aa22.6■■□□□ 1.21
RXRB-203ENST00000481441 HYPKQ9NX55 129 aa22.6■■□□□ 1.21
RXRB-203ENST00000481441 USP17L8P0C7I0 530 aa22.59■■□□□ 1.21
RXRB-203ENST00000481441 NEUROD2Q15784 382 aa22.59■■□□□ 1.21
RXRB-203ENST00000481441 ZBTB38Q8NAP3 1195 aaPredicted RBP22.59■■□□□ 1.21
RXRB-203ENST00000481441 ZNF296Q8WUU4 475 aaPredicted RBP22.59■■□□□ 1.21
RXRB-203ENST00000481441 TRIM35Q9UPQ4 493 aa22.59■■□□□ 1.21
RXRB-203ENST00000481441 LAS1LQ9Y4W2 734 aaKnown RBP22.59■■□□□ 1.21
RXRB-203ENST00000481441 TBC1D8O95759 1140 aa22.58■■□□□ 1.21
RXRB-203ENST00000481441 HDAC9Q9UKV0 1011 aa22.58■■□□□ 1.21
RXRB-203ENST00000481441 SCAF8Q9UPN6 1271 aaKnown RBP22.57■■□□□ 1.2
RXRB-203ENST00000481441 UBE2Q2LH0YL09 131 aa22.57■■□□□ 1.2
RXRB-203ENST00000481441 ZNF646O15015 1829 aaPredicted RBP22.56■■□□□ 1.2
RXRB-203ENST00000481441 USP17L3A6NCW0 530 aa22.56■■□□□ 1.2
RXRB-203ENST00000481441 USP17L4A6NCW7 530 aa22.56■■□□□ 1.2
RXRB-203ENST00000481441 HSP90B1P14625 803 aaKnown RBP22.56■■□□□ 1.2
RXRB-203ENST00000481441 TM4SF4P48230 202 aa22.56■■□□□ 1.2
RXRB-203ENST00000481441 NOM1Q5C9Z4 860 aaKnown RBP22.56■■□□□ 1.2
RXRB-203ENST00000481441 USP17L1Q7RTZ2 530 aa22.56■■□□□ 1.2
RXRB-203ENST00000481441 CCDC146Q8IYE0 955 aa22.56■■□□□ 1.2
RXRB-203ENST00000481441 XDHP47989 1333 aa22.55■■□□□ 1.2
RXRB-203ENST00000481441 CCDC152Q4G0S7 254 aa22.55■■□□□ 1.2
RXRB-203ENST00000481441 PRAMEF18Q5VWM3 479 aa22.55■■□□□ 1.2
RXRB-203ENST00000481441 DUSP27Q5VZP5 1158 aa22.55■■□□□ 1.2
RXRB-203ENST00000481441 PODNQ7Z5L7 613 aa22.55■■□□□ 1.2
RXRB-203ENST00000481441 GPR25O00155 361 aa22.54■■□□□ 1.2
RXRB-203ENST00000481441 NBPF9Q3BBW0 867 aa22.54■■□□□ 1.2
RXRB-203ENST00000481441 RIC3Q7Z5B4 369 aa22.54■■□□□ 1.2
RXRB-203ENST00000481441 PDE8AO60658 829 aa22.53■■□□□ 1.2
RXRB-203ENST00000481441 PCCAP05165 728 aaPredicted RBP22.53■■□□□ 1.2
RXRB-203ENST00000481441 ATP2B4P23634 1241 aa22.52■■□□□ 1.2
RXRB-203ENST00000481441 GOLGA2Q08379 1002 aa22.52■■□□□ 1.2
RXRB-203ENST00000481441 FBXO46Q6PJ61 603 aaPredicted RBP22.52■■□□□ 1.2
RXRB-203ENST00000481441 CCDC191Q8NCU4 936 aa22.52■■□□□ 1.2
RXRB-203ENST00000481441 CCDC85AQ96PX6 553 aaPredicted RBP22.52■■□□□ 1.2
RXRB-203ENST00000481441 PHAXQ9H814 394 aaKnown RBP22.52■■□□□ 1.2
RXRB-203ENST00000481441 WTIPA6NIX2 430 aaPredicted RBP22.51■■□□□ 1.19
RXRB-203ENST00000481441 RALBP1Q15311 655 aa22.51■■□□□ 1.19
RXRB-203ENST00000481441 ANKRD18AQ8IVF6 992 aa22.51■■□□□ 1.19
RXRB-203ENST00000481441 JARID2Q92833 1246 aaPredicted RBP22.51■■□□□ 1.19
RXRB-203ENST00000481441 RUNDC1Q96C34 613 aa22.51■■□□□ 1.19
RXRB-203ENST00000481441 MYD88Q99836 296 aa22.51■■□□□ 1.19
RXRB-203ENST00000481441 CFHR5Q9BXR6 569 aa22.51■■□□□ 1.19
RXRB-203ENST00000481441 TTLL12Q14166 644 aaPredicted RBP22.5■■□□□ 1.19
RXRB-203ENST00000481441 WNT10BO00744 389 aa22.49■■□□□ 1.19
RXRB-203ENST00000481441 DACT2Q5SW24 774 aa22.49■■□□□ 1.19
RXRB-203ENST00000481441 MXD3Q9BW11 206 aa22.49■■□□□ 1.19
RXRB-203ENST00000481441 MBIPQ9NS73 344 aa22.49■■□□□ 1.19
RXRB-203ENST00000481441 SPEF2Q9C093 1822 aa22.49■■□□□ 1.19
RXRB-203ENST00000481441 MED23Q9ULK4 1368 aa22.49■■□□□ 1.19
RXRB-203ENST00000481441 NF2P35240 595 aa22.48■■□□□ 1.19
RXRB-203ENST00000481441 MKRN3Q13064 507 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms