RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ECE2O60344 883 aa15.52■□□□□ 0.08
SQSTM1-207ENST00000481335 DEFB115Q30KQ5 88 aa15.52■□□□□ 0.08
SQSTM1-207ENST00000481335 PLA2G12BQ9BX93 195 aa15.52■□□□□ 0.08
SQSTM1-207ENST00000481335 MYH16Q9H6N6 1097 aa15.52■□□□□ 0.08
SQSTM1-207ENST00000481335 SEC31BQ9NQW1 1179 aa15.52■□□□□ 0.08
SQSTM1-207ENST00000481335 ANKIB1Q9P2G1 1089 aa15.52■□□□□ 0.08
SQSTM1-207ENST00000481335 UFL1O94874 794 aa15.51■□□□□ 0.07
SQSTM1-207ENST00000481335 VEGFBP49765 207 aa15.51■□□□□ 0.07
SQSTM1-207ENST00000481335 DBNDD1Q9H9R9 158 aa15.51■□□□□ 0.07
SQSTM1-207ENST00000481335 CNOT7Q9UIV1 285 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-207ENST00000481335 ABT1Q9ULW3 272 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-207ENST00000481335 H7C1W4 665 aa15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 PSMD14O00487 310 aa15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 VAMP4O75379 141 aa15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 ATP2B4P23634 1241 aa15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 ECE1P42892 770 aa15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 FKBP5Q13451 457 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 MICALL2Q8IY33 904 aa15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 LINS1Q8NG48 757 aa15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 TTLL11Q8NHH1 800 aa15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 DNAAF4Q8WXU2 420 aa15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 BSDC1Q9NW68 430 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-207ENST00000481335 RIMBP2O15034 1052 aa15.49■□□□□ 0.07
SQSTM1-207ENST00000481335 GCKRQ14397 625 aa15.49■□□□□ 0.07
SQSTM1-207ENST00000481335 CWF19L2Q2TBE0 894 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-207ENST00000481335 COL13A1Q5TAT6 717 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-207ENST00000481335 CDC37L1Q7L3B6 337 aa15.49■□□□□ 0.07
SQSTM1-207ENST00000481335 G2E3Q7L622 706 aa15.49■□□□□ 0.07
SQSTM1-207ENST00000481335 AIDAQ96BJ3 306 aa15.49■□□□□ 0.07
SQSTM1-207ENST00000481335 HHIPL1Q96JK4 782 aa15.49■□□□□ 0.07
SQSTM1-207ENST00000481335 TLL2Q9Y6L7 1015 aa15.49■□□□□ 0.07
SQSTM1-207ENST00000481335 MED23Q9ULK4 1368 aa15.49■□□□□ 0.07
SQSTM1-207ENST00000481335 WDR33Q9C0J8 1336 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-207ENST00000481335 POLR2AP24928 1970 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-207ENST00000481335 G3V3G9 751 aa15.48■□□□□ 0.07
SQSTM1-207ENST00000481335 VIL1P09327 827 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-207ENST00000481335 MAP2K1Q02750 393 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-207ENST00000481335 DCAF8Q5TAQ9 597 aa15.48■□□□□ 0.07
SQSTM1-207ENST00000481335 UBE3BQ7Z3V4 1068 aa15.48■□□□□ 0.07
SQSTM1-207ENST00000481335 PODNQ7Z5L7 613 aa15.48■□□□□ 0.07
SQSTM1-207ENST00000481335 AGBL3Q8NEM8 1001 aa15.48■□□□□ 0.07
SQSTM1-207ENST00000481335 TRPM4Q8TD43 1214 aa15.48■□□□□ 0.07
SQSTM1-207ENST00000481335 HIRAP54198 1017 aaPredicted RBP15.47■□□□□ 0.07
SQSTM1-207ENST00000481335 EXOSC9Q06265 439 aaKnown RBP15.47■□□□□ 0.07
SQSTM1-207ENST00000481335 CST9Q5W186 159 aa15.47■□□□□ 0.07
SQSTM1-207ENST00000481335 GREM2Q9H772 168 aa15.47■□□□□ 0.07
SQSTM1-207ENST00000481335 PRDM10Q9NQV6 1147 aa15.47■□□□□ 0.07
SQSTM1-207ENST00000481335 WBP1LQ9NX94 342 aa15.47■□□□□ 0.07
SQSTM1-207ENST00000481335 ZNF646O15015 1829 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-207ENST00000481335 IGHMBP2P38935 993 aaKnown RBP15.46■□□□□ 0.07
SQSTM1-207ENST00000481335 CTCFP49711 727 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-207ENST00000481335 CASP7P55210 303 aa15.46■□□□□ 0.07
SQSTM1-207ENST00000481335 DOK7Q18PE1 504 aa15.46■□□□□ 0.07
SQSTM1-207ENST00000481335 JARID2Q92833 1246 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-207ENST00000481335 CCDC85AQ96PX6 553 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-207ENST00000481335 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-207ENST00000481335 A0A1B0GUL6 1792 aa15.46■□□□□ 0.07
SQSTM1-207ENST00000481335 TRAF5O00463 557 aa15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 CELF2O95319 508 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 CSF1RP07333 972 aa15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 MMP14P50281 582 aa15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 SAPCD2Q86UD0 394 aa15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 FAM9BQ8IZU0 186 aa15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 TNS4Q8IZW8 715 aa15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 CAPNS2Q96L46 248 aa15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 GLIS2Q9BZE0 524 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 MINPP1Q9UNW1 487 aa15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 LEMD3Q9Y2U8 911 aa15.45■□□□□ 0.06
SQSTM1-207ENST00000481335 FOXN1O15353 648 aa15.44■□□□□ 0.06
SQSTM1-207ENST00000481335 MAP2K2P36507 400 aa15.44■□□□□ 0.06
SQSTM1-207ENST00000481335 CCT4P50991 539 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-207ENST00000481335 RSBN1LQ6PCB5 846 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-207ENST00000481335 GPR101Q96P66 508 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-207ENST00000481335 ANKRD2Q9GZV1 360 aa15.44■□□□□ 0.06
SQSTM1-207ENST00000481335 SALL2Q9Y467 1007 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-207ENST00000481335 MYO3BQ8WXR4 1341 aa15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 ZNF521Q96K83 1311 aa15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 USP17L3A6NCW0 530 aa15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 USP17L4A6NCW7 530 aa15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 ITGA6P23229 1130 aa15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 ZNF280AP59817 542 aaPredicted RBP15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 KIF4BQ2VIQ3 1234 aa15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 USP17L1Q7RTZ2 530 aa15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 SAMD7Q7Z3H4 446 aa15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 DCPSQ96C86 337 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 MPHOSPH8Q99549 860 aa15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 SPINK5Q9NQ38 1064 aaPredicted RBP15.43■□□□□ 0.06
SQSTM1-207ENST00000481335 SHTN1A0MZ66 631 aa15.42■□□□□ 0.06
SQSTM1-207ENST00000481335 FMR1Q06787 632 aaKnown RBP eCLIP15.42■□□□□ 0.062e-7■□□□□ 10
SQSTM1-207ENST00000481335 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
SQSTM1-207ENST00000481335 TBC1D10BQ4KMP7 808 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-207ENST00000481335 BEND3Q5T5X7 828 aa15.42■□□□□ 0.06
SQSTM1-207ENST00000481335 COA1Q9GZY4 146 aa15.42■□□□□ 0.06
SQSTM1-207ENST00000481335 KCNQ5Q9NR82 932 aa15.42■□□□□ 0.06
SQSTM1-207ENST00000481335 PITPNM2Q9BZ72 1349 aa15.42■□□□□ 0.06
SQSTM1-207ENST00000481335 ANKRD18BA2A2Z9 1011 aa15.41■□□□□ 0.06
SQSTM1-207ENST00000481335 ALDH1L1O75891 902 aa15.41■□□□□ 0.06
SQSTM1-207ENST00000481335 PAXIP1Q6ZW49 1069 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-207ENST00000481335 KRT26Q7Z3Y9 468 aa15.41■□□□□ 0.06
SQSTM1-207ENST00000481335 GMLQ99445 158 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms