RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 PUS3Q9BZE2 481 aaKnown RBP25.49■■□□□ 1.67
CTSA-206ENST00000480961 C1orf115Q9H7X2 142 aa25.49■■□□□ 1.67
CTSA-206ENST00000480961 RIMBP2O15034 1052 aa25.48■■□□□ 1.67
CTSA-206ENST00000480961 ZBTB7BO15156 539 aaPredicted RBP25.48■■□□□ 1.67
CTSA-206ENST00000480961 GNAI2P04899 355 aa25.48■■□□□ 1.67
CTSA-206ENST00000480961 LDHAL6AQ6ZMR3 332 aa25.48■■□□□ 1.67
CTSA-206ENST00000480961 LARGE2Q8N3Y3 721 aa25.48■■□□□ 1.67
CTSA-206ENST00000480961 SUPT20HQ8NEM7 779 aa25.48■■□□□ 1.67
CTSA-206ENST00000480961 HELBQ8NG08 1087 aaPredicted RBP25.48■■□□□ 1.67
CTSA-206ENST00000480961 HDAC5Q9UQL6 1122 aa25.48■■□□□ 1.67
CTSA-206ENST00000480961 FER1L6Q2WGJ9 1857 aa25.48■■□□□ 1.67
CTSA-206ENST00000480961 UFL1O94874 794 aa25.47■■□□□ 1.67
CTSA-206ENST00000480961 CNNM1Q9NRU3 951 aa25.47■■□□□ 1.67
CTSA-206ENST00000480961 PODXL2Q9NZ53 605 aa25.47■■□□□ 1.67
CTSA-206ENST00000480961 GGA1Q9UJY5 639 aa25.47■■□□□ 1.67
CTSA-206ENST00000480961 CHRNDQ07001 517 aa25.46■■□□□ 1.67
CTSA-206ENST00000480961 XDHP47989 1333 aa25.45■■□□□ 1.66
CTSA-206ENST00000480961 TAF5LO75529 589 aa25.45■■□□□ 1.66
CTSA-206ENST00000480961 RFX5P48382 616 aaPredicted RBP25.45■■□□□ 1.66
CTSA-206ENST00000480961 ZNF784Q8NCA9 323 aaPredicted RBP25.45■■□□□ 1.66
CTSA-206ENST00000480961 MYH3P11055 1940 aa25.45■■□□□ 1.66
CTSA-206ENST00000480961 SNAP23O00161 211 aa25.44■■□□□ 1.66
CTSA-206ENST00000480961 MVPQ14764 893 aaKnown RBP25.44■■□□□ 1.66
CTSA-206ENST00000480961 WASHC4Q2M389 1173 aa25.44■■□□□ 1.66
CTSA-206ENST00000480961 LRRC24Q50LG9 513 aa25.44■■□□□ 1.66
CTSA-206ENST00000480961 CHD4Q14839 1912 aa25.43■■□□□ 1.66
CTSA-206ENST00000480961 ATP2B4P23634 1241 aa25.43■■□□□ 1.66
CTSA-206ENST00000480961 RRP1P56182 461 aaKnown RBP25.43■■□□□ 1.66
CTSA-206ENST00000480961 KIAA2012Q0VF49 1180 aa25.43■■□□□ 1.66
CTSA-206ENST00000480961 JDP2Q8WYK2 163 aa25.43■■□□□ 1.66
CTSA-206ENST00000480961 ANKRD2Q9GZV1 360 aa25.43■■□□□ 1.66
CTSA-206ENST00000480961 COL4A5P29400 1685 aa25.42■■□□□ 1.66
CTSA-206ENST00000480961 PDE3AQ14432 1141 aa25.42■■□□□ 1.66
CTSA-206ENST00000480961 DOK7Q18PE1 504 aa25.42■■□□□ 1.66
CTSA-206ENST00000480961 PA2G4Q9UQ80 394 aaKnown RBP25.42■■□□□ 1.66
CTSA-206ENST00000480961 DUOX1Q9NRD9 1551 aa25.42■■□□□ 1.66
CTSA-206ENST00000480961 SRGAP3O43295 1099 aa25.41■■□□□ 1.66
CTSA-206ENST00000480961 PTPN12Q05209 780 aaKnown RBP25.41■■□□□ 1.66
CTSA-206ENST00000480961 NIM1KQ8IY84 436 aa25.41■■□□□ 1.66
CTSA-206ENST00000480961 EYA3Q99504 573 aa25.41■■□□□ 1.66
CTSA-206ENST00000480961 SIL1Q9H173 461 aa25.41■■□□□ 1.66
CTSA-206ENST00000480961 RIPOR2Q9Y4F9 1068 aa25.41■■□□□ 1.66
CTSA-206ENST00000480961 SBF1O95248 1867 aa25.4■■□□□ 1.66
CTSA-206ENST00000480961 LRRC37AA6NMS7 1700 aa25.4■■□□□ 1.66
CTSA-206ENST00000480961 ZNF541Q9H0D2 1346 aa25.4■■□□□ 1.66
CTSA-206ENST00000480961 KCNJ4P48050 445 aa25.4■■□□□ 1.66
CTSA-206ENST00000480961 ZC3H12CQ9C0D7 883 aaKnown RBP25.4■■□□□ 1.66
CTSA-206ENST00000480961 VPS33BQ9H267 617 aa25.4■■□□□ 1.66
CTSA-206ENST00000480961 PNMA6EA0A0J9YXQ4 647 aa25.39■■□□□ 1.66
CTSA-206ENST00000480961 KLRK1P26718 216 aa25.39■■□□□ 1.66
CTSA-206ENST00000480961 DBNDD1Q9H9R9 158 aa25.39■■□□□ 1.66
CTSA-206ENST00000480961 ZNF804BA4D1E1 1349 aa25.38■■□□□ 1.65
CTSA-206ENST00000480961 FZD9O00144 591 aa25.38■■□□□ 1.65
CTSA-206ENST00000480961 DDNO94850 711 aaPredicted RBP25.38■■□□□ 1.65
CTSA-206ENST00000480961 DDX19BQ9UMR2 479 aa25.38■■□□□ 1.65
CTSA-206ENST00000480961 LEMD3Q9Y2U8 911 aa25.38■■□□□ 1.65
CTSA-206ENST00000480961 ZC3H4Q9UPT8 1303 aaKnown RBP25.37■■□□□ 1.65
CTSA-206ENST00000480961 GLTPD2A6NH11 291 aa25.37■■□□□ 1.65
CTSA-206ENST00000480961 MTX1Q13505 466 aa25.37■■□□□ 1.65
CTSA-206ENST00000480961 METTL24Q5JXM2 366 aa25.37■■□□□ 1.65
CTSA-206ENST00000480961 TXNRD3Q86VQ6 643 aa25.37■■□□□ 1.65
CTSA-206ENST00000480961 GPBP1L1Q9HC44 474 aaPredicted RBP25.37■■□□□ 1.65
CTSA-206ENST00000480961 ZNRF3Q9ULT6 936 aa25.37■■□□□ 1.65
CTSA-206ENST00000480961 SPEF2Q9C093 1822 aa25.37■■□□□ 1.65
CTSA-206ENST00000480961 EYA2O00167 538 aa25.36■■□□□ 1.65
CTSA-206ENST00000480961 EIF6P56537 245 aaKnown RBP25.36■■□□□ 1.65
CTSA-206ENST00000480961 GJA3Q9Y6H8 435 aa25.36■■□□□ 1.65
CTSA-206ENST00000480961 YDJCA8MPS7 323 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 G3V3G9 751 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 RAD17O75943 681 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 ATP8B2P98198 1209 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 DCAF8Q5TAQ9 597 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 DPY19L2Q6NUT2 758 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 ATG9AQ7Z3C6 839 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 NMRK2Q9NPI5 230 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 KCNQ5Q9NR82 932 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 ZBTB40Q9NUA8 1239 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 MROH5Q6ZUA9 1318 aa25.35■■□□□ 1.65
CTSA-206ENST00000480961 ECE2O60344 883 aa25.34■■□□□ 1.65
CTSA-206ENST00000480961 RRAGCQ9HB90 399 aa25.34■■□□□ 1.65
CTSA-206ENST00000480961 LTBP1Q14766 1721 aa25.34■■□□□ 1.65
CTSA-206ENST00000480961 CXCL9Q07325 125 aa25.33■■□□□ 1.65
CTSA-206ENST00000480961 CCDC88AQ3V6T2 1871 aa25.33■■□□□ 1.65
CTSA-206ENST00000480961 COPRSQ9NQ92 184 aa25.33■■□□□ 1.65
CTSA-206ENST00000480961 KDM2BQ8NHM5 1336 aa25.33■■□□□ 1.64
CTSA-206ENST00000480961 CEP85Q6P2H3 762 aa25.32■■□□□ 1.64
CTSA-206ENST00000480961 SUPT16HQ9Y5B9 1047 aaKnown RBP25.32■■□□□ 1.64
CTSA-206ENST00000480961 TIAM2Q8IVF5 1701 aa25.31■■□□□ 1.64
CTSA-206ENST00000480961 MED23Q9ULK4 1368 aa25.31■■□□□ 1.64
CTSA-206ENST00000480961 CIAO1O76071 339 aa25.3■■□□□ 1.64
CTSA-206ENST00000480961 PDE8BO95263 885 aa25.3■■□□□ 1.64
CTSA-206ENST00000480961 POLA2Q14181 598 aa25.3■■□□□ 1.64
CTSA-206ENST00000480961 VGLL2Q8N8G2 317 aa25.3■■□□□ 1.64
CTSA-206ENST00000480961 SSH3Q8TE77 659 aa25.29■■□□□ 1.64
CTSA-206ENST00000480961 CRBNQ96SW2 442 aa25.29■■□□□ 1.64
CTSA-206ENST00000480961 IRS2Q9Y4H2 1338 aa25.29■■□□□ 1.64
CTSA-206ENST00000480961 IL15P40933 162 aaPredicted RBP25.28■■□□□ 1.64
CTSA-206ENST00000480961 UBE4AQ14139 1066 aa25.28■■□□□ 1.64
CTSA-206ENST00000480961 CIAPIN1Q6FI81 312 aa25.28■■□□□ 1.64
CTSA-206ENST00000480961 GPC2Q8N158 579 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms