RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 JDP2Q8WYK2 163 aa33.59■■■□□ 2.97
CCM2-211ENST00000478582 ANKRD18BA2A2Z9 1011 aa33.58■■■□□ 2.97
CCM2-211ENST00000478582 FZD9O00144 591 aa33.58■■■□□ 2.97
CCM2-211ENST00000478582 IFIT5Q13325 482 aaKnown RBP33.58■■■□□ 2.97
CCM2-211ENST00000478582 FSTL1Q12841 308 aa33.57■■■□□ 2.96
CCM2-211ENST00000478582 VPS33BQ9H267 617 aa33.57■■■□□ 2.96
CCM2-211ENST00000478582 CHMP3Q9Y3E7 222 aa33.57■■■□□ 2.96
CCM2-211ENST00000478582 ZBTB7BO15156 539 aaPredicted RBP33.56■■■□□ 2.96
CCM2-211ENST00000478582 MPNDQ8N594 471 aa33.56■■■□□ 2.96
CCM2-211ENST00000478582 SUPT20HQ8NEM7 779 aa33.56■■■□□ 2.96
CCM2-211ENST00000478582 RTFDC1Q9BY42 306 aaPredicted RBP33.56■■■□□ 2.96
CCM2-211ENST00000478582 BSDC1Q9NW68 430 aaPredicted RBP33.56■■■□□ 2.96
CCM2-211ENST00000478582 LRRFIP2Q9Y608 721 aaKnown RBP33.56■■■□□ 2.96
CCM2-211ENST00000478582 CCDC57Q2TAC2 916 aa33.55■■■□□ 2.96
CCM2-211ENST00000478582 LARGE2Q8N3Y3 721 aa33.55■■■□□ 2.96
CCM2-211ENST00000478582 ZNF541Q9H0D2 1346 aa33.54■■■□□ 2.96
CCM2-211ENST00000478582 LRRC37AA6NMS7 1700 aa33.54■■■□□ 2.96
CCM2-211ENST00000478582 IGHMBP2P38935 993 aaKnown RBP33.54■■■□□ 2.96
CCM2-211ENST00000478582 MVPQ14764 893 aaKnown RBP33.54■■■□□ 2.96
CCM2-211ENST00000478582 DPP8Q6V1X1 898 aaPredicted RBP33.54■■■□□ 2.96
CCM2-211ENST00000478582 RRP1P56182 461 aaKnown RBP33.53■■■□□ 2.96
CCM2-211ENST00000478582 SMC1BQ8NDV3 1235 aa33.53■■■□□ 2.96
CCM2-211ENST00000478582 L3MBTL3Q96JM7 780 aaPredicted RBP33.53■■■□□ 2.96
CCM2-211ENST00000478582 GNAI2P04899 355 aa33.52■■■□□ 2.96
CCM2-211ENST00000478582 PPIP5K2O43314 1243 aa33.51■■■□□ 2.95
CCM2-211ENST00000478582 C20orf194Q5TEA3 1177 aa33.51■■■□□ 2.95
CCM2-211ENST00000478582 COL4A5P29400 1685 aa33.51■■■□□ 2.95
CCM2-211ENST00000478582 EIF6P56537 245 aaKnown RBP33.5■■■□□ 2.95
CCM2-211ENST00000478582 MPHOSPH8Q99549 860 aa33.5■■■□□ 2.95
CCM2-211ENST00000478582 DDX19BQ9UMR2 479 aa33.5■■■□□ 2.95
CCM2-211ENST00000478582 COG6Q9Y2V7 657 aa33.5■■■□□ 2.95
CCM2-211ENST00000478582 IQCA1LA6NCM1 817 aa33.49■■■□□ 2.95
CCM2-211ENST00000478582 AOC3Q16853 763 aa33.49■■■□□ 2.95
CCM2-211ENST00000478582 PODXL2Q9NZ53 605 aa33.49■■■□□ 2.95
CCM2-211ENST00000478582 MTX1Q13505 466 aa33.48■■■□□ 2.95
CCM2-211ENST00000478582 NIM1KQ8IY84 436 aa33.48■■■□□ 2.95
CCM2-211ENST00000478582 GPC2Q8N158 579 aa33.48■■■□□ 2.95
CCM2-211ENST00000478582 MINPP1Q9UNW1 487 aa33.48■■■□□ 2.95
CCM2-211ENST00000478582 SCN4AP35499 1836 aa33.48■■■□□ 2.95
CCM2-211ENST00000478582 APLP1P51693 650 aa33.47■■■□□ 2.95
CCM2-211ENST00000478582 GPSM2P81274 684 aa33.47■■■□□ 2.95
CCM2-211ENST00000478582 ZNF594Q96JF6 807 aaPredicted RBP33.47■■■□□ 2.95
CCM2-211ENST00000478582 RFX5P48382 616 aaPredicted RBP33.46■■■□□ 2.95
CCM2-211ENST00000478582 TAF7LQ5H9L4 462 aa33.46■■■□□ 2.95
CCM2-211ENST00000478582 CHMP4BQ9H444 224 aaKnown RBP33.46■■■□□ 2.95
CCM2-211ENST00000478582 NSFL1CQ9UNZ2 370 aaKnown RBP33.46■■■□□ 2.95
CCM2-211ENST00000478582 KIAA2012Q0VF49 1180 aa33.45■■■□□ 2.95
CCM2-211ENST00000478582 LDHAL6AQ6ZMR3 332 aa33.44■■■□□ 2.94
CCM2-211ENST00000478582 LTBP1Q14766 1721 aa33.43■■■□□ 2.94
CCM2-211ENST00000478582 TAF1DQ9H5J8 278 aaPredicted RBP33.43■■■□□ 2.94
CCM2-211ENST00000478582 HACL1Q9UJ83 578 aa33.43■■■□□ 2.94
CCM2-211ENST00000478582 XDHP47989 1333 aa33.43■■■□□ 2.94
CCM2-211ENST00000478582 ANKRD2Q9GZV1 360 aa33.42■■■□□ 2.94
CCM2-211ENST00000478582 ANKIB1Q9P2G1 1089 aa33.42■■■□□ 2.94
CCM2-211ENST00000478582 ZNRF3Q9ULT6 936 aa33.42■■■□□ 2.94
CCM2-211ENST00000478582 GJA3Q9Y6H8 435 aa33.42■■■□□ 2.94
CCM2-211ENST00000478582 DUOX1Q9NRD9 1551 aa33.42■■■□□ 2.94
CCM2-211ENST00000478582 SPEF2Q9C093 1822 aa33.42■■■□□ 2.94
CCM2-211ENST00000478582 PTPN12Q05209 780 aaKnown RBP33.41■■■□□ 2.94
CCM2-211ENST00000478582 ZBTB40Q9NUA8 1239 aa33.41■■■□□ 2.94
CCM2-211ENST00000478582 POLLQ9UGP5 575 aa33.41■■■□□ 2.94
CCM2-211ENST00000478582 TBC1D16Q8TBP0 767 aa33.4■■■□□ 2.94
CCM2-211ENST00000478582 CHRNDQ07001 517 aa33.39■■■□□ 2.94
CCM2-211ENST00000478582 CNNM1Q9NRU3 951 aa33.39■■■□□ 2.94
CCM2-211ENST00000478582 GGA1Q9UJY5 639 aa33.39■■■□□ 2.94
CCM2-211ENST00000478582 FBXO3Q9UK99 471 aa33.39■■■□□ 2.94
CCM2-211ENST00000478582 RIPOR2Q9Y4F9 1068 aa33.39■■■□□ 2.94
CCM2-211ENST00000478582 SRGAP3O43295 1099 aa33.38■■■□□ 2.93
CCM2-211ENST00000478582 ATP2B4P23634 1241 aa33.38■■■□□ 2.93
CCM2-211ENST00000478582 CHADLQ6NUI6 762 aa33.38■■■□□ 2.93
CCM2-211ENST00000478582 PUS3Q9BZE2 481 aaKnown RBP33.38■■■□□ 2.93
CCM2-211ENST00000478582 POTEIP0CG38 1075 aa33.37■■■□□ 2.93
CCM2-211ENST00000478582 POTEJP0CG39 1038 aa33.37■■■□□ 2.93
CCM2-211ENST00000478582 EPHX2P34913 555 aa33.37■■■□□ 2.93
CCM2-211ENST00000478582 ATP8B2P98198 1209 aa33.37■■■□□ 2.93
CCM2-211ENST00000478582 WASHC4Q2M389 1173 aa33.37■■■□□ 2.93
CCM2-211ENST00000478582 KLHDC4Q8TBB5 520 aa33.37■■■□□ 2.93
CCM2-211ENST00000478582 C1orf115Q9H7X2 142 aa33.37■■■□□ 2.93
CCM2-211ENST00000478582 COPRSQ9NQ92 184 aa33.37■■■□□ 2.93
CCM2-211ENST00000478582 LEMD3Q9Y2U8 911 aa33.37■■■□□ 2.93
CCM2-211ENST00000478582 C6orf229H3BNL8 230 aa33.36■■■□□ 2.93
CCM2-211ENST00000478582 CXCL9Q07325 125 aa33.36■■■□□ 2.93
CCM2-211ENST00000478582 EYA3Q99504 573 aa33.36■■■□□ 2.93
CCM2-211ENST00000478582 UFL1O94874 794 aa33.35■■■□□ 2.93
CCM2-211ENST00000478582 LDHDQ86WU2 507 aa33.35■■■□□ 2.93
CCM2-211ENST00000478582 MROH5Q6ZUA9 1318 aa33.34■■■□□ 2.93
CCM2-211ENST00000478582 PNMA6EA0A0J9YXQ4 647 aa33.34■■■□□ 2.93
CCM2-211ENST00000478582 EYA2O00167 538 aa33.34■■■□□ 2.93
CCM2-211ENST00000478582 LRRC24Q50LG9 513 aa33.34■■■□□ 2.93
CCM2-211ENST00000478582 PNMA8AQ86V59 439 aaPredicted RBP33.34■■■□□ 2.93
CCM2-211ENST00000478582 SUPT16HQ9Y5B9 1047 aaKnown RBP33.34■■■□□ 2.93
CCM2-211ENST00000478582 CIAO1O76071 339 aa33.33■■■□□ 2.93
CCM2-211ENST00000478582 LMOD1P29536 600 aaPredicted RBP33.33■■■□□ 2.93
CCM2-211ENST00000478582 POLA2Q14181 598 aa33.33■■■□□ 2.93
CCM2-211ENST00000478582 SSH3Q8TE77 659 aa33.33■■■□□ 2.93
CCM2-211ENST00000478582 CEP350Q5VT06 3117 aa33.33■■■□□ 2.93
CCM2-211ENST00000478582 SCNN1DP51172 638 aa33.32■■■□□ 2.92
CCM2-211ENST00000478582 EAPPQ56P03 285 aaPredicted RBP33.32■■■□□ 2.92
CCM2-211ENST00000478582 CIAPIN1Q6FI81 312 aa33.32■■■□□ 2.92
CCM2-211ENST00000478582 CEP85Q6P2H3 762 aa33.32■■■□□ 2.92
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