RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 POTEB2H3BUK9 544 aa16.02■□□□□ 0.16
HDAC1-206ENST00000476391 ATP8B2P98198 1209 aa16.02■□□□□ 0.16
HDAC1-206ENST00000476391 BEND6Q5SZJ8 279 aaPredicted RBP16.02■□□□□ 0.16
HDAC1-206ENST00000476391 TMEM132EQ6IEE7 984 aa16.02■□□□□ 0.16
HDAC1-206ENST00000476391 CNTROBQ8N137 903 aa16.02■□□□□ 0.16
HDAC1-206ENST00000476391 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
HDAC1-206ENST00000476391 TPCN1Q9ULQ1 816 aa16.02■□□□□ 0.16
HDAC1-206ENST00000476391 FAN1Q9Y2M0 1017 aa16.02■□□□□ 0.15
HDAC1-206ENST00000476391 MNAT1P51948 309 aa16.01■□□□□ 0.15
HDAC1-206ENST00000476391 ADCK5Q3MIX3 580 aa16.01■□□□□ 0.15
HDAC1-206ENST00000476391 IFNKQ9P0W0 207 aa16.01■□□□□ 0.15
HDAC1-206ENST00000476391 ZFYVE16Q7Z3T8 1539 aa16.01■□□□□ 0.15
HDAC1-206ENST00000476391 CAMSAP1Q5T5Y3 1602 aa16.01■□□□□ 0.15
HDAC1-206ENST00000476391 KINO60870 393 aaKnown RBP16■□□□□ 0.15
HDAC1-206ENST00000476391 DTNBO60941 627 aa16■□□□□ 0.15
HDAC1-206ENST00000476391 ERLIN1O75477 346 aa16■□□□□ 0.15
HDAC1-206ENST00000476391 ERLIN2O94905 339 aa16■□□□□ 0.15
HDAC1-206ENST00000476391 MCM6Q14566 821 aa16■□□□□ 0.15
HDAC1-206ENST00000476391 LARP1Q6PKG0 1096 aaKnown RBP16■□□□□ 0.15
HDAC1-206ENST00000476391 PATL2C9JE40 543 aaKnown RBP16■□□□□ 0.15
HDAC1-206ENST00000476391 TUBB4BP68371 445 aa16■□□□□ 0.15
HDAC1-206ENST00000476391 ANKRD1Q15327 319 aa16■□□□□ 0.15
HDAC1-206ENST00000476391 HSP90B2PQ58FF3 399 aa16■□□□□ 0.15
HDAC1-206ENST00000476391 RAB21Q9UL25 225 aa16■□□□□ 0.15
HDAC1-206ENST00000476391 CRYBG1Q9Y4K1 1723 aa16■□□□□ 0.15
HDAC1-206ENST00000476391 NBPF6Q5VWK0 638 aa15.99■□□□□ 0.15
HDAC1-206ENST00000476391 CCDC73Q6ZRK6 1079 aa15.99■□□□□ 0.15
HDAC1-206ENST00000476391 PI4K2BQ8TCG2 481 aa15.99■□□□□ 0.15
HDAC1-206ENST00000476391 RUFY2Q8WXA3 655 aa15.99■□□□□ 0.15
HDAC1-206ENST00000476391 NBPF4Q96M43 638 aa15.99■□□□□ 0.15
HDAC1-206ENST00000476391 UTP14AQ9BVJ6 771 aaKnown RBP15.99■□□□□ 0.15
HDAC1-206ENST00000476391 A1CFQ9NQ94 594 aaKnown RBP15.99■□□□□ 0.15
HDAC1-206ENST00000476391 ABCC3O15438 1527 aa15.99■□□□□ 0.15
HDAC1-206ENST00000476391 VWA3AA6NCI4 1184 aa15.99■□□□□ 0.15
HDAC1-206ENST00000476391 IFIT2P09913 472 aaKnown RBP15.99■□□□□ 0.15
HDAC1-206ENST00000476391 ZKSCAN1P17029 563 aaPredicted RBP15.99■□□□□ 0.15
HDAC1-206ENST00000476391 CCAR1Q8IX12 1150 aaKnown RBP15.99■□□□□ 0.15
HDAC1-206ENST00000476391 CNNM3Q8NE01 707 aa15.99■□□□□ 0.15
HDAC1-206ENST00000476391 L1RE1Q9UN81 338 aa15.99■□□□□ 0.15
HDAC1-206ENST00000476391 PNMA6EA0A0J9YXQ4 647 aa15.98■□□□□ 0.15
HDAC1-206ENST00000476391 PPP1R12AO14974 1030 aaPredicted RBP15.98■□□□□ 0.15
HDAC1-206ENST00000476391 RESTQ13127 1097 aa15.98■□□□□ 0.15
HDAC1-206ENST00000476391 STAG1Q8WVM7 1258 aa15.98■□□□□ 0.15
HDAC1-206ENST00000476391 RAI14Q9P0K7 980 aa15.98■□□□□ 0.15
HDAC1-206ENST00000476391 SPG7Q9UQ90 795 aa15.98■□□□□ 0.15
HDAC1-206ENST00000476391 C21orf2O43822 256 aa15.98■□□□□ 0.15
HDAC1-206ENST00000476391 HNRNPH1P31943 449 aaKnown RBP15.98■□□□□ 0.15
HDAC1-206ENST00000476391 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
HDAC1-206ENST00000476391 CWC27Q6UX04 472 aaKnown RBP15.98■□□□□ 0.15
HDAC1-206ENST00000476391 ACBD3Q9H3P7 528 aa15.98■□□□□ 0.15
HDAC1-206ENST00000476391 ANKRD65E5RJM6 399 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 FAM160A1Q05DH4 1040 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
HDAC1-206ENST00000476391 MAP2P11137 1827 aaKnown RBP15.97■□□□□ 0.15
HDAC1-206ENST00000476391 ERCC6L2Q5T890 1561 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 FAM83GA6ND36 823 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 CHL1O00533 1208 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 ARHGAP6O43182 974 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 PSMA5P28066 241 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 PRPF40BQ6NWY9 871 aaKnown RBP15.97■□□□□ 0.15
HDAC1-206ENST00000476391 SLC4A10Q6U841 1118 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 MSANTD4Q8NCY6 345 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 ENGASEQ8NFI3 743 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 BICC1Q9H694 974 aaKnown RBP15.97■□□□□ 0.15
HDAC1-206ENST00000476391 RCOR1Q9UKL0 485 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 ARHGEF10O15013 1369 aa15.97■□□□□ 0.15
HDAC1-206ENST00000476391 MYH15Q9Y2K3 1946 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 RAB11FIP3O75154 756 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 CALRP27797 417 aaKnown RBP15.96■□□□□ 0.15
HDAC1-206ENST00000476391 IL13P35225 146 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 GNG11P61952 73 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 NECTIN1Q15223 517 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 GRIPAP1Q4V328 841 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
HDAC1-206ENST00000476391 KAT2BQ92831 832 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 PPP2R2CQ9Y2T4 447 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 RPGRIP1LQ68CZ1 1315 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 N4BP1O75113 896 aaKnown RBP15.96■□□□□ 0.15
HDAC1-206ENST00000476391 NBPF20Q3BBV1 942 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 GBP3Q9H0R5 595 aa15.96■□□□□ 0.15
HDAC1-206ENST00000476391 SOS1Q07889 1333 aaPredicted RBP15.96■□□□□ 0.15
HDAC1-206ENST00000476391 TUBBP07437 444 aa15.95■□□□□ 0.14
HDAC1-206ENST00000476391 HDGFL2Q7Z4V5 671 aaPredicted RBP15.95■□□□□ 0.14
HDAC1-206ENST00000476391 SRGAP1Q7Z6B7 1085 aa15.95■□□□□ 0.14
HDAC1-206ENST00000476391 KIFC2Q96AC6 838 aa15.95■□□□□ 0.14
HDAC1-206ENST00000476391 WDR24Q96S15 920 aa15.95■□□□□ 0.14
HDAC1-206ENST00000476391 MAP4K4O95819 1239 aaPredicted RBP15.95■□□□□ 0.14
HDAC1-206ENST00000476391 CHMP4BP1P59074 171 aa15.95■□□□□ 0.14
HDAC1-206ENST00000476391 SETQ01105 290 aaPredicted RBP15.95■□□□□ 0.14
HDAC1-206ENST00000476391 LRCH2Q5VUJ6 765 aa15.95■□□□□ 0.14
HDAC1-206ENST00000476391 GOLPH3LQ9H4A5 285 aa15.95■□□□□ 0.14
HDAC1-206ENST00000476391 ANKZF1Q9H8Y5 726 aa15.95■□□□□ 0.14
HDAC1-206ENST00000476391 MROH1Q8NDA8 1641 aa15.94■□□□□ 0.14
HDAC1-206ENST00000476391 PTH1RQ03431 593 aa15.94■□□□□ 0.14
HDAC1-206ENST00000476391 NUTM1Q86Y26 1132 aa15.94■□□□□ 0.14
HDAC1-206ENST00000476391 FAM204AQ9H8W3 233 aa15.94■□□□□ 0.14
HDAC1-206ENST00000476391 RBM28Q9NW13 759 aaKnown RBP15.94■□□□□ 0.14
HDAC1-206ENST00000476391 CLTCQ00610 1675 aaKnown RBP15.94■□□□□ 0.14
HDAC1-206ENST00000476391 KIF3CO14782 793 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms