RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 RAD17O75943 681 aa26.84■■□□□ 1.89
LIME1-204ENST00000476183 UFL1O94874 794 aa26.84■■□□□ 1.89
LIME1-204ENST00000476183 ITGA6P23229 1130 aa26.84■■□□□ 1.89
LIME1-204ENST00000476183 CHADLQ6NUI6 762 aa26.84■■□□□ 1.89
LIME1-204ENST00000476183 DBNDD1Q9H9R9 158 aa26.84■■□□□ 1.89
LIME1-204ENST00000476183 GGA1Q9UJY5 639 aa26.84■■□□□ 1.89
LIME1-204ENST00000476183 EPHA10Q5JZY3 1008 aa26.83■■□□□ 1.89
LIME1-204ENST00000476183 EYA3Q99504 573 aa26.83■■□□□ 1.89
LIME1-204ENST00000476183 MINPP1Q9UNW1 487 aa26.83■■□□□ 1.89
LIME1-204ENST00000476183 ADAMTSL1Q8N6G6 1762 aa26.83■■□□□ 1.89
LIME1-204ENST00000476183 EPS15P42566 896 aa26.82■■□□□ 1.88
LIME1-204ENST00000476183 HTRA3P83110 453 aa26.82■■□□□ 1.88
LIME1-204ENST00000476183 EAPPQ56P03 285 aaPredicted RBP26.82■■□□□ 1.88
LIME1-204ENST00000476183 CIAPIN1Q6FI81 312 aa26.82■■□□□ 1.88
LIME1-204ENST00000476183 LDHDQ86WU2 507 aa26.82■■□□□ 1.88
LIME1-204ENST00000476183 SMC4Q9NTJ3 1288 aa26.82■■□□□ 1.88
LIME1-204ENST00000476183 XDHP47989 1333 aa26.82■■□□□ 1.88
LIME1-204ENST00000476183 WTIPA6NIX2 430 aaPredicted RBP26.81■■□□□ 1.88
LIME1-204ENST00000476183 CT47B1P0C2W7 299 aaPredicted RBP26.81■■□□□ 1.88
LIME1-204ENST00000476183 DOK7Q18PE1 504 aa26.81■■□□□ 1.88
LIME1-204ENST00000476183 C9orf78Q9NZ63 289 aaPredicted RBP26.81■■□□□ 1.88
LIME1-204ENST00000476183 LMOD1P29536 600 aaPredicted RBP26.8■■□□□ 1.88
LIME1-204ENST00000476183 IGHMBP2P38935 993 aaKnown RBP26.8■■□□□ 1.88
LIME1-204ENST00000476183 ECE2O60344 883 aa26.79■■□□□ 1.88
LIME1-204ENST00000476183 GMPSP49915 693 aaPredicted RBP26.79■■□□□ 1.88
LIME1-204ENST00000476183 ZC3H12CQ9C0D7 883 aaKnown RBP26.79■■□□□ 1.88
LIME1-204ENST00000476183 KCNQ5Q9NR82 932 aa26.79■■□□□ 1.88
LIME1-204ENST00000476183 NBPF7P0C2Y1 421 aaPredicted RBP26.78■■□□□ 1.88
LIME1-204ENST00000476183 ATP2B4P23634 1241 aa26.78■■□□□ 1.88
LIME1-204ENST00000476183 TNIP1Q15025 636 aa26.78■■□□□ 1.88
LIME1-204ENST00000476183 LMBR1LQ6UX01 489 aa26.78■■□□□ 1.88
LIME1-204ENST00000476183 PNMA8AQ86V59 439 aaPredicted RBP26.78■■□□□ 1.88
LIME1-204ENST00000476183 KAZALD1Q96I82 304 aa26.78■■□□□ 1.88
LIME1-204ENST00000476183 GPRC5DQ9NZD1 345 aa26.78■■□□□ 1.88
LIME1-204ENST00000476183 SCN9AQ15858 1988 aa26.78■■□□□ 1.88
LIME1-204ENST00000476183 UTYO14607 1347 aa26.77■■□□□ 1.88
LIME1-204ENST00000476183 ANKRD18BA2A2Z9 1011 aa26.77■■□□□ 1.88
LIME1-204ENST00000476183 HNRNPUQ00839 825 aaKnown RBP eCLIP26.77■■□□□ 1.88
LIME1-204ENST00000476183 SUCLG2Q96I99 432 aa26.77■■□□□ 1.88
LIME1-204ENST00000476183 CHMP3Q9Y3E7 222 aa26.77■■□□□ 1.88
LIME1-204ENST00000476183 PSMD14O00487 310 aa26.76■■□□□ 1.87
LIME1-204ENST00000476183 DNAJC5GQ8N7S2 189 aa26.76■■□□□ 1.87
LIME1-204ENST00000476183 MPHOSPH8Q99549 860 aa26.76■■□□□ 1.87
LIME1-204ENST00000476183 CLEC11AQ9Y240 323 aa26.76■■□□□ 1.87
LIME1-204ENST00000476183 RARSP54136 660 aaKnown RBP26.75■■□□□ 1.87
LIME1-204ENST00000476183 IFIT5Q13325 482 aaKnown RBP26.75■■□□□ 1.87
LIME1-204ENST00000476183 CCT4P50991 539 aaKnown RBP26.74■■□□□ 1.87
LIME1-204ENST00000476183 BRPF1P55201 1214 aaPredicted RBP26.74■■□□□ 1.87
LIME1-204ENST00000476183 NOB1Q9ULX3 412 aaKnown RBP26.74■■□□□ 1.87
LIME1-204ENST00000476183 ZBTB12Q9Y330 459 aaPredicted RBP26.74■■□□□ 1.87
LIME1-204ENST00000476183 SHTN1A0MZ66 631 aa26.73■■□□□ 1.87
LIME1-204ENST00000476183 ITGBL1O95965 494 aaPredicted RBP26.73■■□□□ 1.87
LIME1-204ENST00000476183 MAP1SQ66K74 1059 aaPredicted RBP26.73■■□□□ 1.87
LIME1-204ENST00000476183 PASKQ96RG2 1323 aa26.72■■□□□ 1.87
LIME1-204ENST00000476183 USP50Q70EL3 339 aaPredicted RBP26.72■■□□□ 1.87
LIME1-204ENST00000476183 ZNF594Q96JF6 807 aaPredicted RBP26.72■■□□□ 1.87
LIME1-204ENST00000476183 ADARB2Q9NS39 739 aaKnown RBP26.72■■□□□ 1.87
LIME1-204ENST00000476183 MED23Q9ULK4 1368 aa26.71■■□□□ 1.87
LIME1-204ENST00000476183 CHRNDQ07001 517 aa26.71■■□□□ 1.87
LIME1-204ENST00000476183 USP44Q9H0E7 712 aa26.71■■□□□ 1.87
LIME1-204ENST00000476183 G3V3G9 751 aa26.7■■□□□ 1.86
LIME1-204ENST00000476183 CCDC57Q2TAC2 916 aa26.7■■□□□ 1.86
LIME1-204ENST00000476183 DCAF8Q5TAQ9 597 aa26.7■■□□□ 1.86
LIME1-204ENST00000476183 TXNRD3Q86VQ6 643 aa26.7■■□□□ 1.86
LIME1-204ENST00000476183 ANKRD2Q9GZV1 360 aa26.7■■□□□ 1.86
LIME1-204ENST00000476183 BICC1Q9H694 974 aaKnown RBP26.7■■□□□ 1.86
LIME1-204ENST00000476183 CNOT7Q9UIV1 285 aaKnown RBP26.7■■□□□ 1.86
LIME1-204ENST00000476183 LEMD3Q9Y2U8 911 aa26.7■■□□□ 1.86
LIME1-204ENST00000476183 A0A1B0GUL6 1792 aa26.7■■□□□ 1.86
LIME1-204ENST00000476183 KLRK1P26718 216 aa26.69■■□□□ 1.86
LIME1-204ENST00000476183 CNTROBQ8N137 903 aa26.69■■□□□ 1.86
LIME1-204ENST00000476183 ANKRD44Q8N8A2 993 aa26.69■■□□□ 1.86
LIME1-204ENST00000476183 DPF2Q92785 391 aa26.69■■□□□ 1.86
LIME1-204ENST00000476183 ZNF804BA4D1E1 1349 aa26.68■■□□□ 1.86
LIME1-204ENST00000476183 PSME4Q14997 1843 aa26.68■■□□□ 1.86
LIME1-204ENST00000476183 SNAP23O00161 211 aa26.68■■□□□ 1.86
LIME1-204ENST00000476183 VIL1P09327 827 aaKnown RBP26.68■■□□□ 1.86
LIME1-204ENST00000476183 RABL6Q3YEC7 729 aaPredicted RBP26.68■■□□□ 1.86
LIME1-204ENST00000476183 MICALL2Q8IY33 904 aa26.68■■□□□ 1.86
LIME1-204ENST00000476183 HELBQ8NG08 1087 aaPredicted RBP26.68■■□□□ 1.86
LIME1-204ENST00000476183 TRPM4Q8TD43 1214 aa26.68■■□□□ 1.86
LIME1-204ENST00000476183 TAF5LO75529 589 aa26.67■■□□□ 1.86
LIME1-204ENST00000476183 HIRAP54198 1017 aaPredicted RBP26.67■■□□□ 1.86
LIME1-204ENST00000476183 TAF7LQ5H9L4 462 aa26.66■■□□□ 1.86
LIME1-204ENST00000476183 API5Q9BZZ5 524 aaKnown RBP26.66■■□□□ 1.86
LIME1-204ENST00000476183 RPS12P25398 132 aaKnown RBP26.65■■□□□ 1.86
LIME1-204ENST00000476183 LDHAL6AQ6ZMR3 332 aa26.65■■□□□ 1.86
LIME1-204ENST00000476183 PODNQ7Z5L7 613 aa26.65■■□□□ 1.86
LIME1-204ENST00000476183 KLRG1Q96E93 195 aa26.65■■□□□ 1.86
LIME1-204ENST00000476183 IRS2Q9Y4H2 1338 aa26.65■■□□□ 1.86
LIME1-204ENST00000476183 H7C1D1 291 aa26.64■■□□□ 1.86
LIME1-204ENST00000476183 BCAR3O75815 825 aa26.63■■□□□ 1.85
LIME1-204ENST00000476183 EGFRP00533 1210 aa26.63■■□□□ 1.85
LIME1-204ENST00000476183 KCNJ4P48050 445 aa26.63■■□□□ 1.85
LIME1-204ENST00000476183 RSBN1LQ6PCB5 846 aaPredicted RBP26.63■■□□□ 1.85
LIME1-204ENST00000476183 SAMD7Q7Z3H4 446 aa26.63■■□□□ 1.85
LIME1-204ENST00000476183 PUS3Q9BZE2 481 aaKnown RBP26.63■■□□□ 1.85
LIME1-204ENST00000476183 COA1Q9GZY4 146 aa26.63■■□□□ 1.85
LIME1-204ENST00000476183 CNNM1Q9NRU3 951 aa26.63■■□□□ 1.85
LIME1-204ENST00000476183 CREBZFQ9NS37 354 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms