RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 MAGEA9P43362 315 aa12.28□□□□□ -0.44
ABCF1-205ENST00000475993 LRRFIP1Q32MZ4 808 aaKnown RBP12.28□□□□□ -0.44
ABCF1-205ENST00000475993 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
ABCF1-205ENST00000475993 TRIM65Q6PJ69 517 aa12.28□□□□□ -0.44
ABCF1-205ENST00000475993 DNAI1Q9UI46 699 aa12.28□□□□□ -0.44
ABCF1-205ENST00000475993 PPP1R12AO14974 1030 aaPredicted RBP12.28□□□□□ -0.44
ABCF1-205ENST00000475993 LMAN1P49257 510 aa12.28□□□□□ -0.44
ABCF1-205ENST00000475993 DHX8Q14562 1220 aaKnown RBP12.28□□□□□ -0.44
ABCF1-205ENST00000475993 FUT8Q9BYC5 575 aa12.28□□□□□ -0.44
ABCF1-205ENST00000475993 ANO10Q9NW15 660 aa12.28□□□□□ -0.44
ABCF1-205ENST00000475993 FANCGO15287 622 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 RAB11FIP3O75154 756 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 IVLP07476 585 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 NECTIN1Q15223 517 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 GPR161Q8N6U8 529 aaKnown RBP12.27□□□□□ -0.45
ABCF1-205ENST00000475993 CCDC34Q96HJ3 373 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 CARD6Q9BX69 1037 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 SFPQP23246 707 aaKnown RBP eCLIP12.27□□□□□ -0.45
ABCF1-205ENST00000475993 EVCP57679 992 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 MCTP2Q6DN12 878 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 HOMER1Q86YM7 354 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 SSH3Q8TE77 659 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 CDK19Q9BWU1 502 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 PARP3Q9Y6F1 533 aa12.27□□□□□ -0.45
ABCF1-205ENST00000475993 CCP110O43303 1012 aa12.26□□□□□ -0.45
ABCF1-205ENST00000475993 RPS6KA5O75582 802 aa12.26□□□□□ -0.45
ABCF1-205ENST00000475993 RESTQ13127 1097 aa12.26□□□□□ -0.45
ABCF1-205ENST00000475993 MCM10Q7L590 875 aa12.26□□□□□ -0.45
ABCF1-205ENST00000475993 CEP57L1Q8IYX8 460 aa12.26□□□□□ -0.45
ABCF1-205ENST00000475993 AOPEPQ8N6M6 819 aa12.26□□□□□ -0.45
ABCF1-205ENST00000475993 ARFGAP3Q9NP61 516 aa12.26□□□□□ -0.45
ABCF1-205ENST00000475993 CRB1P82279 1406 aa12.26□□□□□ -0.45
ABCF1-205ENST00000475993 RUFY2Q8WXA3 655 aa12.26□□□□□ -0.45
ABCF1-205ENST00000475993 XRN1Q8IZH2 1706 aaKnown RBP12.26□□□□□ -0.45
ABCF1-205ENST00000475993 H3BQF6 201 aa12.25□□□□□ -0.45
ABCF1-205ENST00000475993 RBM28Q9NW13 759 aaKnown RBP12.25□□□□□ -0.45
ABCF1-205ENST00000475993 NRDCO43847 1150 aa12.25□□□□□ -0.45
ABCF1-205ENST00000475993 URI1O94763 535 aaPredicted RBP12.25□□□□□ -0.45
ABCF1-205ENST00000475993 IFIT2P09913 472 aaKnown RBP12.25□□□□□ -0.45
ABCF1-205ENST00000475993 ZKSCAN1P17029 563 aaPredicted RBP12.25□□□□□ -0.45
ABCF1-205ENST00000475993 SSR1P43307 286 aaKnown RBP12.25□□□□□ -0.45
ABCF1-205ENST00000475993 RHPN1Q8TCX5 695 aa12.25□□□□□ -0.45
ABCF1-205ENST00000475993 EPC1Q9H2F5 836 aa12.25□□□□□ -0.45
ABCF1-205ENST00000475993 USP42Q9H9J4 1324 aaKnown RBP12.25□□□□□ -0.45
ABCF1-205ENST00000475993 SWT1Q5T5J6 900 aaKnown RBP12.24□□□□□ -0.45
ABCF1-205ENST00000475993 LEKR1Q6ZMV7 388 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 RSRC2Q7L4I2 434 aaKnown RBP12.24□□□□□ -0.45
ABCF1-205ENST00000475993 TMC6Q7Z403 805 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 DDX54Q8TDD1 881 aaKnown RBP12.24□□□□□ -0.45
ABCF1-205ENST00000475993 BORCS6Q96GS4 357 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 NAT10Q9H0A0 1025 aaKnown RBP12.24□□□□□ -0.45
ABCF1-205ENST00000475993 ALDH8A1Q9H2A2 487 aaPredicted RBP12.24□□□□□ -0.45
ABCF1-205ENST00000475993 CFAP45Q9UL16 551 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 MAP3K5Q99683 1374 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 KIDINS220Q9ULH0 1771 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 A0A087WWV3 80 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 MPHOSPH10O00566 681 aaKnown RBP12.24□□□□□ -0.45
ABCF1-205ENST00000475993 MAP2K7O14733 419 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 PSME1Q06323 249 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 NBPF9Q3BBW0 867 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 TTLL5Q6EMB2 1281 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 XPO4Q9C0E2 1151 aaKnown RBP12.24□□□□□ -0.45
ABCF1-205ENST00000475993 GOLPH3LQ9H4A5 285 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
ABCF1-205ENST00000475993 ANKRD1Q15327 319 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 CREB3L3Q68CJ9 461 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 CCAR1Q8IX12 1150 aaKnown RBP12.24□□□□□ -0.45
ABCF1-205ENST00000475993 ENGASEQ8NFI3 743 aa12.24□□□□□ -0.45
ABCF1-205ENST00000475993 EIF3CLB5ME19 914 aaKnown RBP12.23□□□□□ -0.45
ABCF1-205ENST00000475993 SMC2O95347 1197 aa12.23□□□□□ -0.45
ABCF1-205ENST00000475993 COL9A3Q14050 684 aaPredicted RBP12.23□□□□□ -0.45
ABCF1-205ENST00000475993 POLA2Q14181 598 aa12.23□□□□□ -0.45
ABCF1-205ENST00000475993 EIF3CQ99613 913 aaKnown RBP12.23□□□□□ -0.45
ABCF1-205ENST00000475993 PARD6BQ9BYG5 372 aa12.23□□□□□ -0.45
ABCF1-205ENST00000475993 PSMA5P28066 241 aa12.23□□□□□ -0.45
ABCF1-205ENST00000475993 NBPF10Q6P3W6 841 aaKnown RBP12.23□□□□□ -0.45
ABCF1-205ENST00000475993 USP44Q9H0E7 712 aa12.23□□□□□ -0.45
ABCF1-205ENST00000475993 ZSCAN16Q9H4T2 348 aaPredicted RBP12.23□□□□□ -0.45
ABCF1-205ENST00000475993 ITSN1Q15811 1721 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 ANKRD65E5RJM6 399 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 SURF6O75683 361 aaKnown RBP12.22□□□□□ -0.45
ABCF1-205ENST00000475993 ADD1P35611 737 aaKnown RBP12.22□□□□□ -0.45
ABCF1-205ENST00000475993 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 FLIIQ13045 1269 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 SUGP1Q8IWZ8 645 aaKnown RBP12.22□□□□□ -0.45
ABCF1-205ENST00000475993 PPM1EQ8WY54 764 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 RABGGTAQ92696 567 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 BPIFA3Q9BQP9 254 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 IFNKQ9P0W0 207 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 RCOR1Q9UKL0 485 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 RBM8AQ9Y5S9 174 aaKnown RBP12.22□□□□□ -0.45
ABCF1-205ENST00000475993 SCP2P22307 547 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 ARID4AP29374 1257 aaPredicted RBP12.22□□□□□ -0.45
ABCF1-205ENST00000475993 CORO7P57737 925 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 TOB2Q14106 344 aaPredicted RBP12.22□□□□□ -0.45
ABCF1-205ENST00000475993 LONRF2Q1L5Z9 754 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 MAP9Q49MG5 647 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 JAKMIP3Q5VZ66 844 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 MPHOSPH8Q99549 860 aa12.22□□□□□ -0.45
ABCF1-205ENST00000475993 CCDC151A5D8V7 595 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms