RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 TMTC2Q8N394 836 aa20.22■□□□□ 0.83
LPCAT1-202ENST00000475622 PSMA7O14818 248 aa20.22■□□□□ 0.83
LPCAT1-202ENST00000475622 ESR2Q92731 530 aa20.22■□□□□ 0.83
LPCAT1-202ENST00000475622 FERP16591 822 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 ATRIPQ8WXE1 791 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 LMOD1P29536 600 aaPredicted RBP20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 MCMDC2Q4G0Z9 681 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 SELENOOQ9BVL4 669 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 CHPF2Q9P2E5 772 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 ZKSCAN5Q9Y2L8 839 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 V9GYY5 206 aaPredicted RBP20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 TSPY3P0CV98 308 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 TSPY8P0CW00 308 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 CYP7A1P22680 504 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 SLC4A4Q9Y6R1 1079 aa20.21■□□□□ 0.83
LPCAT1-202ENST00000475622 TACC1O75410 805 aa20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 ANKRD44Q8N8A2 993 aa20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 PAIP2Q9BPZ3 127 aaKnown RBP20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 CNNM2Q9H8M5 875 aa20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 PPM1FP49593 454 aaPredicted RBP20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 ASIC1P78348 528 aa20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 DDX12PQ92771 950 aa20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 SLU7O95391 586 aaKnown RBP20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 IDI1Q13907 227 aa20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 HEATR3Q7Z4Q2 680 aa20.2■□□□□ 0.82
LPCAT1-202ENST00000475622 SCAF11Q99590 1463 aaKnown RBP20.19■□□□□ 0.82
LPCAT1-202ENST00000475622 FBXO31Q5XUX0 539 aaPredicted RBP20.19■□□□□ 0.82
LPCAT1-202ENST00000475622 ATP2B3Q16720 1220 aa20.19■□□□□ 0.82
LPCAT1-202ENST00000475622 SYNCQ9H7C4 482 aa20.19■□□□□ 0.82
LPCAT1-202ENST00000475622 PRIM1P49642 420 aaKnown RBP20.19■□□□□ 0.82
LPCAT1-202ENST00000475622 RGS22Q8NE09 1264 aa20.19■□□□□ 0.82
LPCAT1-202ENST00000475622 DHX58Q96C10 678 aa20.19■□□□□ 0.82
LPCAT1-202ENST00000475622 DISP3Q9P2K9 1392 aa20.19■□□□□ 0.82
LPCAT1-202ENST00000475622 CTAGE9A4FU28 777 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 IQCGQ9H095 443 aaKnown RBP20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 IQSEC3Q9UPP2 1182 aaPredicted RBP20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 FBLN1P23142 703 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 NSRP1Q9H0G5 558 aaKnown RBP20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 KRT13P13646 458 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 TYRO3Q06418 890 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 SPTLC2O15270 562 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 IVLP07476 585 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 GSTO1P78417 241 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 CCDC152Q4G0S7 254 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 KRT28Q7Z3Y7 464 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 C16orf71Q8IYS4 520 aaPredicted RBP20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 SNX21Q969T3 373 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 SRRTQ9BXP5 876 aaKnown RBP20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 RTL1A6NKG5 1358 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 ABCC5O15440 1437 aa20.18■□□□□ 0.82
LPCAT1-202ENST00000475622 OPA1O60313 960 aa20.17■□□□□ 0.82
LPCAT1-202ENST00000475622 ANKRD24Q8TF21 1146 aa20.17■□□□□ 0.82
LPCAT1-202ENST00000475622 RASAL2Q9UJF2 1139 aa20.17■□□□□ 0.82
LPCAT1-202ENST00000475622 XAGE3Q8WTP9 111 aa20.17■□□□□ 0.82
LPCAT1-202ENST00000475622 ARID5AQ03989 594 aa20.17■□□□□ 0.82
LPCAT1-202ENST00000475622 ATP8B2P98198 1209 aa20.17■□□□□ 0.82
LPCAT1-202ENST00000475622 CCDC6Q16204 474 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 USP37Q86T82 979 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 TRIM75PA6NK02 468 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 KIF4AO95239 1232 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 KIF5AQ12840 1032 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 CCDC77Q9BR77 488 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 GOLGA1Q92805 767 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 SLC9C2Q5TAH2 1124 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 LMBR1LQ6UX01 489 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 NESP48681 1621 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 GNAQP50148 359 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 KRT83P78385 493 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 MXRA7P84157 204 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 NMIQ13287 307 aaPredicted RBP20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 COPS6Q7L5N1 327 aa20.16■□□□□ 0.82
LPCAT1-202ENST00000475622 NOS1P29475 1434 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 MRVI1Q9Y6F6 885 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 ANKRD36BQ8N2N9 1353 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 ACEP12821 1306 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 KRT86O43790 486 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 GRM8O00222 908 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 PHACTR2O75167 634 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 TUBB4AP04350 444 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 FAM135AQ9P2D6 1515 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 PRPHP41219 470 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 NAPAP54920 295 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 SPATA24Q86W54 205 aa20.15■□□□□ 0.82
LPCAT1-202ENST00000475622 GRIPAP1Q4V328 841 aa20.14■□□□□ 0.82
LPCAT1-202ENST00000475622 CCDC42Q96M95 316 aa20.14■□□□□ 0.82
LPCAT1-202ENST00000475622 SBNO2Q9Y2G9 1366 aa20.14■□□□□ 0.81
LPCAT1-202ENST00000475622 CAPN2P17655 700 aa20.14■□□□□ 0.81
LPCAT1-202ENST00000475622 C14orf93Q9H972 538 aaKnown RBP20.14■□□□□ 0.81
LPCAT1-202ENST00000475622 CAPZA3Q96KX2 299 aa20.14■□□□□ 0.81
LPCAT1-202ENST00000475622 TOPBP1Q92547 1522 aa20.14■□□□□ 0.81
LPCAT1-202ENST00000475622 MRPL50Q8N5N7 158 aaKnown RBP20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 TMEM87AQ8NBN3 555 aa20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 PABPN1LA6NDY0 278 aaKnown RBP20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 ALDH1L1O75891 902 aa20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 STX17P56962 302 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms