RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 TTC16Q8NEE8 873 aa9.1□□□□□ -0.95
LTN1-204ENST00000475344 NACC1Q96RE7 527 aa9.1□□□□□ -0.95
LTN1-204ENST00000475344 FURINP09958 794 aa9.09□□□□□ -0.95
LTN1-204ENST00000475344 PCSK2P16519 638 aa9.09□□□□□ -0.95
LTN1-204ENST00000475344 GATA4P43694 442 aa9.09□□□□□ -0.95
LTN1-204ENST00000475344 ZNF211Q13398 564 aaPredicted RBP9.09□□□□□ -0.95
LTN1-204ENST00000475344 SUZ12Q15022 739 aaKnown RBP9.09□□□□□ -0.95
LTN1-204ENST00000475344 GRIK5Q16478 980 aa9.09□□□□□ -0.95
LTN1-204ENST00000475344 PHLDB3Q6NSJ2 640 aa9.09□□□□□ -0.95
LTN1-204ENST00000475344 OR13H1Q8NG92 308 aa9.09□□□□□ -0.95
LTN1-204ENST00000475344 ABI2Q9NYB9 513 aaPredicted RBP9.09□□□□□ -0.95
LTN1-204ENST00000475344 A6NHS1 94 aa9.08□□□□□ -0.96
LTN1-204ENST00000475344 HYAL2Q12891 473 aa9.08□□□□□ -0.96
LTN1-204ENST00000475344 DOC2BQ14184 412 aa9.08□□□□□ -0.96
LTN1-204ENST00000475344 SHISA2Q6UWI4 295 aa9.08□□□□□ -0.96
LTN1-204ENST00000475344 SPACA7Q96KW9 195 aa9.08□□□□□ -0.96
LTN1-204ENST00000475344 ELP3Q9H9T3 547 aa9.08□□□□□ -0.96
LTN1-204ENST00000475344 TMEM63CQ9P1W3 806 aa9.08□□□□□ -0.96
LTN1-204ENST00000475344 USTQ9Y2C2 406 aa9.08□□□□□ -0.96
LTN1-204ENST00000475344 CYP2E1P05181 493 aaPredicted RBP9.07□□□□□ -0.96
LTN1-204ENST00000475344 ELNP15502 786 aa9.07□□□□□ -0.96
LTN1-204ENST00000475344 COL13A1Q5TAT6 717 aaPredicted RBP9.07□□□□□ -0.96
LTN1-204ENST00000475344 PDGFAP04085 211 aa9.06□□□□□ -0.96
LTN1-204ENST00000475344 FMR1NBQ8N0W7 255 aaPredicted RBP9.06□□□□□ -0.96
LTN1-204ENST00000475344 KANSL3Q9P2N6 904 aa9.06□□□□□ -0.96
LTN1-204ENST00000475344 USP21Q9UK80 565 aa9.06□□□□□ -0.96
LTN1-204ENST00000475344 POLIQ9UNA4 740 aa9.06□□□□□ -0.96
LTN1-204ENST00000475344 RPLP1P05386 114 aaKnown RBP9.05□□□□□ -0.96
LTN1-204ENST00000475344 SELPP16109 830 aa9.05□□□□□ -0.96
LTN1-204ENST00000475344 ATP11AP98196 1134 aa9.05□□□□□ -0.96
LTN1-204ENST00000475344 PDE12Q6L8Q7 609 aaKnown RBP9.05□□□□□ -0.96
LTN1-204ENST00000475344 B4GALNT3Q6L9W6 998 aa9.05□□□□□ -0.96
LTN1-204ENST00000475344 ALKBH2Q6NS38 261 aa9.05□□□□□ -0.96
LTN1-204ENST00000475344 NCAPG2Q86XI2 1143 aa9.05□□□□□ -0.96
LTN1-204ENST00000475344 IL22RA1Q8N6P7 574 aa9.05□□□□□ -0.96
LTN1-204ENST00000475344 TTC9Q92623 222 aa9.05□□□□□ -0.96
LTN1-204ENST00000475344 GGNBP2Q9H3C7 697 aa9.05□□□□□ -0.96
LTN1-204ENST00000475344 TRIM33Q9UPN9 1127 aa9.05□□□□□ -0.96
LTN1-204ENST00000475344 C9orf172C9J069 976 aa9.04□□□□□ -0.96
LTN1-204ENST00000475344 FAM13AO94988 1023 aa9.04□□□□□ -0.96
LTN1-204ENST00000475344 HOXD8P13378 290 aaPredicted RBP9.04□□□□□ -0.96
LTN1-204ENST00000475344 MZF1P28698 734 aaPredicted RBP9.04□□□□□ -0.96
LTN1-204ENST00000475344 FKBP4Q02790 459 aaKnown RBP eCLIP9.04□□□□□ -0.96
LTN1-204ENST00000475344 CEP135Q66GS9 1140 aa9.04□□□□□ -0.96
LTN1-204ENST00000475344 RETREG2Q8NC44 543 aa9.04□□□□□ -0.96
LTN1-204ENST00000475344 K7ELQ4 463 aaPredicted RBP9.03□□□□□ -0.96
LTN1-204ENST00000475344 LACRTQ9GZZ8 138 aa9.03□□□□□ -0.96
LTN1-204ENST00000475344 RASSF4Q9H2L5 321 aa9.03□□□□□ -0.96
LTN1-204ENST00000475344 CNTN3Q9P232 1028 aa9.03□□□□□ -0.96
LTN1-204ENST00000475344 ADAM23O75077 832 aa9.02□□□□□ -0.97
LTN1-204ENST00000475344 SMNDC1O75940 238 aaKnown RBP eCLIP9.02□□□□□ -0.97
LTN1-204ENST00000475344 SERPINB4P48594 390 aa9.02□□□□□ -0.97
LTN1-204ENST00000475344 SF3B2Q13435 895 aaKnown RBP9.02□□□□□ -0.97
LTN1-204ENST00000475344 C1orf127Q8N9H9 656 aa9.02□□□□□ -0.97
LTN1-204ENST00000475344 CES1P23141 567 aa9.01□□□□□ -0.97
LTN1-204ENST00000475344 CDC25BP30305 580 aa9.01□□□□□ -0.97
LTN1-204ENST00000475344 FBXO11Q86XK2 927 aa9.01□□□□□ -0.97
LTN1-204ENST00000475344 DTWD1Q8N5C7 304 aa9.01□□□□□ -0.97
LTN1-204ENST00000475344 LENG1Q96BZ8 264 aaPredicted RBP9.01□□□□□ -0.97
LTN1-204ENST00000475344 H3BRB1 525 aa9□□□□□ -0.97
LTN1-204ENST00000475344 NRG1Q02297 640 aaPredicted RBP9□□□□□ -0.97
LTN1-204ENST00000475344 MBTPS1Q14703 1052 aa9□□□□□ -0.97
LTN1-204ENST00000475344 TUT1Q9H6E5 874 aaKnown RBP9□□□□□ -0.97
LTN1-204ENST00000475344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9□□□□□ -0.97
LTN1-204ENST00000475344 DEAF1O75398 565 aaPredicted RBP8.99□□□□□ -0.97
LTN1-204ENST00000475344 KIF4AO95239 1232 aa8.99□□□□□ -0.97
LTN1-204ENST00000475344 ACPPP15309 386 aa8.99□□□□□ -0.97
LTN1-204ENST00000475344 NPR3P17342 541 aa8.99□□□□□ -0.97
LTN1-204ENST00000475344 ADGRE1Q14246 886 aa8.99□□□□□ -0.97
LTN1-204ENST00000475344 TXNDC11Q6PKC3 985 aa8.99□□□□□ -0.97
LTN1-204ENST00000475344 ILDR2Q71H61 639 aa8.99□□□□□ -0.97
LTN1-204ENST00000475344 GLYCTKQ8IVS8 523 aa8.99□□□□□ -0.97
LTN1-204ENST00000475344 TPSG1Q9NRR2 321 aa8.99□□□□□ -0.97
LTN1-204ENST00000475344 CCDC87Q9NVE4 849 aa8.99□□□□□ -0.97
LTN1-204ENST00000475344 LINC01387J3KSC0 135 aa8.98□□□□□ -0.97
LTN1-204ENST00000475344 FZD6O60353 706 aa8.98□□□□□ -0.97
LTN1-204ENST00000475344 XKR5Q6UX68 686 aa8.98□□□□□ -0.97
LTN1-204ENST00000475344 PBX4Q9BYU1 374 aa8.98□□□□□ -0.97
LTN1-204ENST00000475344 SEMA6BQ9H3T3 888 aa8.98□□□□□ -0.97
LTN1-204ENST00000475344 PPME1Q9Y570 386 aa8.98□□□□□ -0.97
LTN1-204ENST00000475344 FAM177BA6PVY3 158 aa8.97□□□□□ -0.97
LTN1-204ENST00000475344 PHACTR2O75167 634 aa8.97□□□□□ -0.97
LTN1-204ENST00000475344 USP5P45974 858 aa8.97□□□□□ -0.97
LTN1-204ENST00000475344 TXNRD3Q86VQ6 643 aa8.97□□□□□ -0.97
LTN1-204ENST00000475344 FOXD3Q9UJU5 478 aaPredicted RBP8.97□□□□□ -0.97
LTN1-204ENST00000475344 ICMTO60725 284 aa8.96□□□□□ -0.98
LTN1-204ENST00000475344 TRPA1O75762 1119 aa8.96□□□□□ -0.98
LTN1-204ENST00000475344 CDC27P30260 824 aa8.96□□□□□ -0.98
LTN1-204ENST00000475344 CEP120Q8N960 986 aa8.96□□□□□ -0.98
LTN1-204ENST00000475344 CHRDQ9H2X0 955 aa8.96□□□□□ -0.98
LTN1-204ENST00000475344 EREGO14944 169 aa8.95□□□□□ -0.98
LTN1-204ENST00000475344 TNFRSF21O75509 655 aa8.95□□□□□ -0.98
LTN1-204ENST00000475344 IREB2P48200 963 aaKnown RBP8.95□□□□□ -0.98
LTN1-204ENST00000475344 EHHADHQ08426 723 aa8.95□□□□□ -0.98
LTN1-204ENST00000475344 PDE4CQ08493 712 aa8.95□□□□□ -0.98
LTN1-204ENST00000475344 SETDB1Q15047 1291 aa8.95□□□□□ -0.98
LTN1-204ENST00000475344 IGF2-ASQ6U949 168 aa8.95□□□□□ -0.98
LTN1-204ENST00000475344 ADAMTSL4Q6UY14 1074 aa8.95□□□□□ -0.98
LTN1-204ENST00000475344 PMEPA1Q969W9 287 aa8.95□□□□□ -0.98
LTN1-204ENST00000475344 SH2B1Q9NRF2 756 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms