RNA–Protein interactions for RNA: ENST00000473388.6

ATXN1-204, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 1,569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-204ENST00000473388 NEUROD2Q15784 382 aa9.68□□□□□ -0.86
ATXN1-204ENST00000473388 SULF1Q8IWU6 871 aa9.68□□□□□ -0.86
ATXN1-204ENST00000473388 CDCA5Q96FF9 252 aa9.68□□□□□ -0.86
ATXN1-204ENST00000473388 CSRNP1Q96S65 589 aa9.68□□□□□ -0.86
ATXN1-204ENST00000473388 EYA3Q99504 573 aa9.68□□□□□ -0.86
ATXN1-204ENST00000473388 SCAF8Q9UPN6 1271 aaKnown RBP9.68□□□□□ -0.86
ATXN1-204ENST00000473388 G3V3G9 751 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 TMPOP42166 694 aaKnown RBP9.67□□□□□ -0.86
ATXN1-204ENST00000473388 DCAF8Q5TAQ9 597 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 TBC1D16Q8TBP0 767 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 PCDH10Q9P2E7 1040 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 SCN9AQ15858 1988 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 AKAP11Q9UKA4 1901 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 SF3B3Q15393 1217 aaKnown RBP9.67□□□□□ -0.86
ATXN1-204ENST00000473388 HDGFL1Q5TGJ6 251 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 ANGEL2Q5VTE6 544 aaKnown RBP9.67□□□□□ -0.86
ATXN1-204ENST00000473388 ANKRD13DQ6ZTN6 518 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 RASAL3Q86YV0 1011 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 CCDC146Q8IYE0 955 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 PLBD2Q8NHP8 589 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 ISCA1Q9BUE6 129 aa9.67□□□□□ -0.86
ATXN1-204ENST00000473388 TNRC18O15417 2968 aaPredicted RBP9.66□□□□□ -0.86
ATXN1-204ENST00000473388 IRS4O14654 1257 aaPredicted RBP9.66□□□□□ -0.86
ATXN1-204ENST00000473388 UFL1O94874 794 aa9.66□□□□□ -0.86
ATXN1-204ENST00000473388 VIL1P09327 827 aaKnown RBP9.66□□□□□ -0.86
ATXN1-204ENST00000473388 LMOD3Q0VAK6 560 aa9.66□□□□□ -0.86
ATXN1-204ENST00000473388 MOB2Q70IA6 237 aa9.66□□□□□ -0.86
ATXN1-204ENST00000473388 CTU1Q7Z7A3 348 aaKnown RBP9.66□□□□□ -0.86
ATXN1-204ENST00000473388 ZC3H12CQ9C0D7 883 aaKnown RBP9.66□□□□□ -0.86
ATXN1-204ENST00000473388 SEC31BQ9NQW1 1179 aa9.66□□□□□ -0.86
ATXN1-204ENST00000473388 BABAM1Q9NWV8 329 aa9.66□□□□□ -0.86
ATXN1-204ENST00000473388 RPS8P62241 208 aaKnown RBP9.65□□□□□ -0.86
ATXN1-204ENST00000473388 SCARF1Q14162 830 aa9.65□□□□□ -0.86
ATXN1-204ENST00000473388 PRAMEF18Q5VWM3 479 aa9.65□□□□□ -0.86
ATXN1-204ENST00000473388 CCDC85AQ96PX6 553 aaPredicted RBP9.65□□□□□ -0.86
ATXN1-204ENST00000473388 ANKIB1Q9P2G1 1089 aa9.65□□□□□ -0.86
ATXN1-204ENST00000473388 CHL1O00533 1208 aa9.64□□□□□ -0.87
ATXN1-204ENST00000473388 TBC1D8O95759 1140 aa9.64□□□□□ -0.87
ATXN1-204ENST00000473388 JARID2Q92833 1246 aaPredicted RBP9.64□□□□□ -0.87
ATXN1-204ENST00000473388 GGA1Q9UJY5 639 aa9.64□□□□□ -0.87
ATXN1-204ENST00000473388 HDAC9Q9UKV0 1011 aa9.64□□□□□ -0.87
ATXN1-204ENST00000473388 HPS5Q9UPZ3 1129 aa9.64□□□□□ -0.87
ATXN1-204ENST00000473388 UBE2Q2LH0YL09 131 aa9.63□□□□□ -0.87
ATXN1-204ENST00000473388 MKRN3Q13064 507 aaKnown RBP9.63□□□□□ -0.87
ATXN1-204ENST00000473388 RSBN1LQ6PCB5 846 aaPredicted RBP9.63□□□□□ -0.87
ATXN1-204ENST00000473388 DBF4Q9UBU7 674 aaPredicted RBP9.63□□□□□ -0.87
ATXN1-204ENST00000473388 PAPPA2Q9BXP8 1791 aa9.63□□□□□ -0.87
ATXN1-204ENST00000473388 ZNF280AP59817 542 aaPredicted RBP9.63□□□□□ -0.87
ATXN1-204ENST00000473388 TTLL12Q14166 644 aaPredicted RBP9.63□□□□□ -0.87
ATXN1-204ENST00000473388 PRPF38BQ5VTL8 546 aaKnown RBP9.63□□□□□ -0.87
ATXN1-204ENST00000473388 RIC3Q7Z5B4 369 aa9.63□□□□□ -0.87
ATXN1-204ENST00000473388 ZNF296Q8WUU4 475 aaPredicted RBP9.63□□□□□ -0.87
ATXN1-204ENST00000473388 MYOZ2Q9NPC6 264 aa9.63□□□□□ -0.87
ATXN1-204ENST00000473388 PODXL2Q9NZ53 605 aa9.63□□□□□ -0.87
ATXN1-204ENST00000473388 TRIM35Q9UPQ4 493 aa9.63□□□□□ -0.87
ATXN1-204ENST00000473388 USP17L8P0C7I0 530 aa9.62□□□□□ -0.87
ATXN1-204ENST00000473388 DUSP27Q5VZP5 1158 aa9.62□□□□□ -0.87
ATXN1-204ENST00000473388 AGBL3Q8NEM8 1001 aa9.62□□□□□ -0.87
ATXN1-204ENST00000473388 FBXW7Q969H0 707 aa9.62□□□□□ -0.87
ATXN1-204ENST00000473388 MYD88Q99836 296 aa9.62□□□□□ -0.87
ATXN1-204ENST00000473388 MXD3Q9BW11 206 aa9.62□□□□□ -0.87
ATXN1-204ENST00000473388 PHAXQ9H814 394 aaKnown RBP9.62□□□□□ -0.87
ATXN1-204ENST00000473388 HYPKQ9NX55 129 aa9.62□□□□□ -0.87
ATXN1-204ENST00000473388 WTIPA6NIX2 430 aaPredicted RBP9.61□□□□□ -0.87
ATXN1-204ENST00000473388 FKBP1BP68106 108 aa9.61□□□□□ -0.87
ATXN1-204ENST00000473388 PRKG1Q13976 671 aa9.61□□□□□ -0.87
ATXN1-204ENST00000473388 NBPF9Q3BBW0 867 aa9.61□□□□□ -0.87
ATXN1-204ENST00000473388 REM2Q8IYK8 340 aaPredicted RBP9.61□□□□□ -0.87
ATXN1-204ENST00000473388 ZBTB38Q8NAP3 1195 aaPredicted RBP9.61□□□□□ -0.87
ATXN1-204ENST00000473388 GMLQ99445 158 aa9.61□□□□□ -0.87
ATXN1-204ENST00000473388 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.61□□□□□ -0.87
ATXN1-204ENST00000473388 PSME4Q14997 1843 aa9.61□□□□□ -0.87
ATXN1-204ENST00000473388 USP17L3A6NCW0 530 aa9.6□□□□□ -0.87
ATXN1-204ENST00000473388 USP17L4A6NCW7 530 aa9.6□□□□□ -0.87
ATXN1-204ENST00000473388 ELL2O00472 640 aaPredicted RBP9.6□□□□□ -0.87
ATXN1-204ENST00000473388 HOXB7P09629 217 aa9.6□□□□□ -0.87
ATXN1-204ENST00000473388 GOLGA2Q08379 1002 aa9.6□□□□□ -0.87
ATXN1-204ENST00000473388 TRIM28Q13263 835 aaKnown RBP9.6□□□□□ -0.87
ATXN1-204ENST00000473388 CCDC152Q4G0S7 254 aa9.6□□□□□ -0.87
ATXN1-204ENST00000473388 USP17L1Q7RTZ2 530 aa9.6□□□□□ -0.87
ATXN1-204ENST00000473388 SPEF2Q9C093 1822 aa9.6□□□□□ -0.87
ATXN1-204ENST00000473388 XDHP47989 1333 aa9.6□□□□□ -0.87
ATXN1-204ENST00000473388 PITPNM2Q9BZ72 1349 aa9.6□□□□□ -0.87
ATXN1-204ENST00000473388 GPR25O00155 361 aa9.59□□□□□ -0.87
ATXN1-204ENST00000473388 PDE8AO60658 829 aa9.59□□□□□ -0.87
ATXN1-204ENST00000473388 ATP2B4P23634 1241 aa9.59□□□□□ -0.87
ATXN1-204ENST00000473388 PKN2Q16513 984 aaKnown RBP9.59□□□□□ -0.87
ATXN1-204ENST00000473388 ANKRD18AQ8IVF6 992 aa9.59□□□□□ -0.87
ATXN1-204ENST00000473388 RUNDC1Q96C34 613 aa9.59□□□□□ -0.87
ATXN1-204ENST00000473388 MBIPQ9NS73 344 aa9.59□□□□□ -0.87
ATXN1-204ENST00000473388 ZNF609O15014 1411 aa9.59□□□□□ -0.87
ATXN1-204ENST00000473388 SASH1O94885 1247 aa9.58□□□□□ -0.88
ATXN1-204ENST00000473388 PCCAP05165 728 aaPredicted RBP9.58□□□□□ -0.88
ATXN1-204ENST00000473388 PODNQ7Z5L7 613 aa9.58□□□□□ -0.88
ATXN1-204ENST00000473388 R3HDMLQ9H3Y0 253 aa9.58□□□□□ -0.88
ATXN1-204ENST00000473388 FZD1Q9UP38 647 aa9.58□□□□□ -0.88
ATXN1-204ENST00000473388 WNT10BO00744 389 aa9.58□□□□□ -0.88
ATXN1-204ENST00000473388 NF2P35240 595 aa9.58□□□□□ -0.88
ATXN1-204ENST00000473388 WDR43Q15061 677 aaKnown RBP eCLIP9.58□□□□□ -0.88
ATXN1-204ENST00000473388 RALBP1Q15311 655 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms