RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 TNIP1Q15025 636 aa14.59□□□□□ -0.07
CPNE1-222ENST00000473373 TAF7LQ5H9L4 462 aa14.59□□□□□ -0.07
CPNE1-222ENST00000473373 CIAPIN1Q6FI81 312 aa14.59□□□□□ -0.07
CPNE1-222ENST00000473373 CDCA7LQ96GN5 454 aa14.59□□□□□ -0.07
CPNE1-222ENST00000473373 L3MBTL3Q96JM7 780 aaPredicted RBP14.59□□□□□ -0.07
CPNE1-222ENST00000473373 MPHOSPH8Q99549 860 aa14.59□□□□□ -0.07
CPNE1-222ENST00000473373 RTFDC1Q9BY42 306 aaPredicted RBP14.59□□□□□ -0.07
CPNE1-222ENST00000473373 ZC3H12CQ9C0D7 883 aaKnown RBP14.59□□□□□ -0.07
CPNE1-222ENST00000473373 SRCIN1Q9C0H9 1055 aa14.59□□□□□ -0.07
CPNE1-222ENST00000473373 GREM2Q9H772 168 aa14.59□□□□□ -0.07
CPNE1-222ENST00000473373 SMC4Q9NTJ3 1288 aa14.59□□□□□ -0.07
CPNE1-222ENST00000473373 COL4A1P02462 1669 aa14.58□□□□□ -0.07
CPNE1-222ENST00000473373 TMEM88BA6NKF7 163 aa14.58□□□□□ -0.08
CPNE1-222ENST00000473373 H7C1W4 665 aa14.58□□□□□ -0.08
CPNE1-222ENST00000473373 RAD17O75943 681 aa14.58□□□□□ -0.08
CPNE1-222ENST00000473373 ITGBL1O95965 494 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-222ENST00000473373 PNMA8AQ86V59 439 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-222ENST00000473373 TTLL11Q8NHH1 800 aa14.58□□□□□ -0.08
CPNE1-222ENST00000473373 AIDAQ96BJ3 306 aa14.58□□□□□ -0.08
CPNE1-222ENST00000473373 DBNDD1Q9H9R9 158 aa14.58□□□□□ -0.08
CPNE1-222ENST00000473373 DUOX1Q9NRD9 1551 aa14.57□□□□□ -0.08
CPNE1-222ENST00000473373 ANKRD18BA2A2Z9 1011 aa14.57□□□□□ -0.08
CPNE1-222ENST00000473373 ITGA6P23229 1130 aa14.57□□□□□ -0.08
CPNE1-222ENST00000473373 KCNJ4P48050 445 aa14.57□□□□□ -0.08
CPNE1-222ENST00000473373 HNRNPUQ00839 825 aaKnown RBP eCLIP14.57□□□□□ -0.08
CPNE1-222ENST00000473373 DOK7Q18PE1 504 aa14.57□□□□□ -0.08
CPNE1-222ENST00000473373 GPR101Q96P66 508 aaPredicted RBP14.57□□□□□ -0.08
CPNE1-222ENST00000473373 XDHP47989 1333 aa14.57□□□□□ -0.08
CPNE1-222ENST00000473373 LTBP1Q14766 1721 aa14.56□□□□□ -0.08
CPNE1-222ENST00000473373 GRM8O00222 908 aa14.56□□□□□ -0.08
CPNE1-222ENST00000473373 ECE2O60344 883 aa14.56□□□□□ -0.08
CPNE1-222ENST00000473373 CTCFP49711 727 aaPredicted RBP14.56□□□□□ -0.08
CPNE1-222ENST00000473373 FAM161AQ3B820 660 aa14.56□□□□□ -0.08
CPNE1-222ENST00000473373 BEND3Q5T5X7 828 aa14.56□□□□□ -0.08
CPNE1-222ENST00000473373 MAP1SQ66K74 1059 aaPredicted RBP14.56□□□□□ -0.08
CPNE1-222ENST00000473373 PRDM10Q9NQV6 1147 aa14.56□□□□□ -0.08
CPNE1-222ENST00000473373 POLLQ9UGP5 575 aa14.56□□□□□ -0.08
CPNE1-222ENST00000473373 PTPRCP08575 1304 aa14.56□□□□□ -0.08
CPNE1-222ENST00000473373 ALDH1L1O75891 902 aa14.55□□□□□ -0.08
CPNE1-222ENST00000473373 ATP2B4P23634 1241 aa14.55□□□□□ -0.08
CPNE1-222ENST00000473373 LBX1P52954 281 aa14.55□□□□□ -0.08
CPNE1-222ENST00000473373 CXCL9Q07325 125 aa14.55□□□□□ -0.08
CPNE1-222ENST00000473373 IFIT5Q13325 482 aaKnown RBP14.55□□□□□ -0.08
CPNE1-222ENST00000473373 MRPL50Q8N5N7 158 aaKnown RBP14.55□□□□□ -0.08
CPNE1-222ENST00000473373 TBC1D16Q8TBP0 767 aa14.55□□□□□ -0.08
CPNE1-222ENST00000473373 SSH1Q8WYL5 1049 aa14.55□□□□□ -0.08
CPNE1-222ENST00000473373 FBXW7Q969H0 707 aa14.55□□□□□ -0.08
CPNE1-222ENST00000473373 PSME4Q14997 1843 aa14.55□□□□□ -0.08
CPNE1-222ENST00000473373 TRPM7Q96QT4 1865 aa14.55□□□□□ -0.08
CPNE1-222ENST00000473373 GMPSP49915 693 aaPredicted RBP14.54□□□□□ -0.08
CPNE1-222ENST00000473373 CCDC57Q2TAC2 916 aa14.54□□□□□ -0.08
CPNE1-222ENST00000473373 DEFB115Q30KQ5 88 aa14.54□□□□□ -0.08
CPNE1-222ENST00000473373 ALDH1L2Q3SY69 923 aa14.54□□□□□ -0.08
CPNE1-222ENST00000473373 CNTROBQ8N137 903 aa14.54□□□□□ -0.08
CPNE1-222ENST00000473373 PLA2G12BQ9BX93 195 aa14.54□□□□□ -0.08
CPNE1-222ENST00000473373 BSDC1Q9NW68 430 aaPredicted RBP14.54□□□□□ -0.08
CPNE1-222ENST00000473373 WBP1LQ9NX94 342 aa14.54□□□□□ -0.08
CPNE1-222ENST00000473373 POLR2AP24928 1970 aaKnown RBP14.53□□□□□ -0.08
CPNE1-222ENST00000473373 SCN9AQ15858 1988 aa14.53□□□□□ -0.08
CPNE1-222ENST00000473373 A0A1B0GUL6 1792 aa14.53□□□□□ -0.08
CPNE1-222ENST00000473373 RTL9Q8NET4 1388 aa14.53□□□□□ -0.08
CPNE1-222ENST00000473373 H7C1D1 291 aa14.53□□□□□ -0.08
CPNE1-222ENST00000473373 CT47B1P0C2W7 299 aaPredicted RBP14.53□□□□□ -0.08
CPNE1-222ENST00000473373 EPS15P42566 896 aa14.53□□□□□ -0.08
CPNE1-222ENST00000473373 PODXL2Q9NZ53 605 aa14.53□□□□□ -0.08
CPNE1-222ENST00000473373 SCNN1DP51172 638 aa14.52□□□□□ -0.09
CPNE1-222ENST00000473373 LMBR1LQ6UX01 489 aa14.52□□□□□ -0.09
CPNE1-222ENST00000473373 ANKRD2Q9GZV1 360 aa14.52□□□□□ -0.09
CPNE1-222ENST00000473373 CNNM1Q9NRU3 951 aa14.52□□□□□ -0.09
CPNE1-222ENST00000473373 ADARB2Q9NS39 739 aaKnown RBP14.52□□□□□ -0.09
CPNE1-222ENST00000473373 GPRC5DQ9NZD1 345 aa14.52□□□□□ -0.09
CPNE1-222ENST00000473373 ABT1Q9ULW3 272 aaKnown RBP14.52□□□□□ -0.09
CPNE1-222ENST00000473373 MINPP1Q9UNW1 487 aa14.52□□□□□ -0.09
CPNE1-222ENST00000473373 YDJCA8MPS7 323 aa14.51□□□□□ -0.09
CPNE1-222ENST00000473373 PSMD14O00487 310 aa14.51□□□□□ -0.09
CPNE1-222ENST00000473373 PLIN1O60240 522 aa14.51□□□□□ -0.09
CPNE1-222ENST00000473373 CCT4P50991 539 aaKnown RBP14.51□□□□□ -0.09
CPNE1-222ENST00000473373 CASP7P55210 303 aa14.51□□□□□ -0.09
CPNE1-222ENST00000473373 USP50Q70EL3 339 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-222ENST00000473373 CNKSR2Q8WXI2 1034 aa14.51□□□□□ -0.09
CPNE1-222ENST00000473373 ADAMTSL1Q8N6G6 1762 aa14.5□□□□□ -0.09
CPNE1-222ENST00000473373 WDR33Q9C0J8 1336 aaKnown RBP14.5□□□□□ -0.09
CPNE1-222ENST00000473373 RASSF10A6NK89 507 aa14.5□□□□□ -0.09
CPNE1-222ENST00000473373 FMR1Q06787 632 aaKnown RBP eCLIP14.5□□□□□ -0.09
CPNE1-222ENST00000473373 CNOT7Q9UIV1 285 aaKnown RBP14.5□□□□□ -0.09
CPNE1-222ENST00000473373 ZBTB12Q9Y330 459 aaPredicted RBP14.5□□□□□ -0.09
CPNE1-222ENST00000473373 CSF1RP07333 972 aa14.49□□□□□ -0.09
CPNE1-222ENST00000473373 HSPA8P11142 646 aaKnown RBP14.49□□□□□ -0.09
CPNE1-222ENST00000473373 FOXO4P98177 505 aa14.49□□□□□ -0.09
CPNE1-222ENST00000473373 GRM1Q13255 1194 aa14.49□□□□□ -0.09
CPNE1-222ENST00000473373 MAPK8IP2Q13387 824 aaPredicted RBP14.49□□□□□ -0.09
CPNE1-222ENST00000473373 RBM26Q5T8P6 1007 aaKnown RBP14.49□□□□□ -0.09
CPNE1-222ENST00000473373 LDHAL6AQ6ZMR3 332 aa14.49□□□□□ -0.09
CPNE1-222ENST00000473373 MICALL2Q8IY33 904 aa14.49□□□□□ -0.09
CPNE1-222ENST00000473373 API5Q9BZZ5 524 aaKnown RBP14.49□□□□□ -0.09
CPNE1-222ENST00000473373 NOB1Q9ULX3 412 aaKnown RBP14.49□□□□□ -0.09
CPNE1-222ENST00000473373 LEMD3Q9Y2U8 911 aa14.49□□□□□ -0.09
CPNE1-222ENST00000473373 MED23Q9ULK4 1368 aa14.48□□□□□ -0.09
CPNE1-222ENST00000473373 ZNF804BA4D1E1 1349 aa14.48□□□□□ -0.09
CPNE1-222ENST00000473373 KIF16BQ96L93 1317 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms