RNA–Protein interactions for RNA: ENST00000472032.1

BBX-222, Transcript of BBX, HMG-box containing, human

TSL 4

Gene BBX, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-222	ENST00000472032	STK32A	Q8WU08	396 aa		4.82	□□□□□ -1.64
BBX-222	ENST00000472032	TIGD1	Q96MW7	591 aa		4.82	□□□□□ -1.64
BBX-222	ENST00000472032	DNAJC2	Q99543	621 aa	Known RBP	4.82	□□□□□ -1.64
BBX-222	ENST00000472032	CDCA7	Q9BWT1	371 aa	Predicted RBP	4.82	□□□□□ -1.64
BBX-222	ENST00000472032	CHMP4A	Q9BY43	222 aa		4.82	□□□□□ -1.64
BBX-222	ENST00000472032	SRCIN1	Q9C0H9	1055 aa		4.82	□□□□□ -1.64
BBX-222	ENST00000472032	PAXBP1	Q9Y5B6	917 aa		4.82	□□□□□ -1.64
BBX-222	ENST00000472032	ERBB3	P21860	1342 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	AOX1	Q06278	1338 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	CCDC171	Q6TFL3	1326 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.81	□□□□□ -1.64
BBX-222	ENST00000472032	ANKRD33B	A6NCL7	494 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L15	C9J2P7	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L10	C9JJH3	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L13	C9JLJ4	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L12	C9JPN9	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L11	C9JVI0	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L21	D6R901	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L18	D6R9N7	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L22	D6RA61	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L17	D6RBQ6	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L19	D6RCP7	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L20	D6RJB6	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	ZSCAN22	P10073	491 aa	Predicted RBP	4.81	□□□□□ -1.64
BBX-222	ENST00000472032	PTGS1	P23219	599 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	ATP2B4	P23634	1241 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	CDC25B	P30305	580 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	PRKAR2B	P31323	418 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	PDE1A	P54750	535 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	MCCD1	P59942	119 aa	Predicted RBP	4.81	□□□□□ -1.64
BBX-222	ENST00000472032	CTDSPL2	Q05D32	466 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	LMOD3	Q0VAK6	560 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L24	Q0WX57	530 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	TWISTNB	Q3B726	338 aa	Predicted RBP	4.81	□□□□□ -1.64
BBX-222	ENST00000472032	RNF20	Q5VTR2	975 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	PHLDB3	Q6NSJ2	640 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	TMEM92	Q6UXU6	159 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	C3orf67	Q6ZVT6	689 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	EYA1	Q99502	592 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	MBIP	Q9NS73	344 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	PALD1	Q9ULE6	856 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	CNPY2	Q9Y2B0	182 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.81	□□□□□ -1.64
BBX-222	ENST00000472032	TMEM131L	A2VDJ0	1609 aa		4.81	□□□□□ -1.64
BBX-222	ENST00000472032	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.8	□□□□□ -1.64
BBX-222	ENST00000472032	ARHGEF10	O15013	1369 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	PTPRC	P08575	1304 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	SPATA31D1	Q6ZQQ2	1576 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	USP17L5	A8MUK1	530 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	FYB1	O15117	783 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	HMMR	O75330	724 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	F13A1	P00488	732 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	CCDC192	P0DO97	292 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	TNNT1	P13805	278 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	CAPN2	P17655	700 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	KCNJ4	P48050	445 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	ZNF75D	P51815	510 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	NAALADL2	Q58DX5	795 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	TAF7L	Q5H9L4	462 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	PLA2G4D	Q86XP0	818 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	CCDC112	Q8NEF3	446 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	TDRD7	Q8NHU6	1098 aa	Known RBP	4.8	□□□□□ -1.64
BBX-222	ENST00000472032	KIF1BP	Q96EK5	621 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	TTC14	Q96N46	770 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	GGNBP2	Q9H3C7	697 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	KCND1	Q9NSA2	647 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	ATP6V1D	Q9Y5K8	247 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	PXDNL	A1KZ92	1463 aa		4.8	□□□□□ -1.64
BBX-222	ENST00000472032	AATK	Q6ZMQ8	1374 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	ELP1	O95163	1332 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	RAD50	Q92878	1312 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	VGLL3	A8MV65	326 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	KIF3B	O15066	747 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	STX6	O43752	255 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	SKI	P12755	728 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	CHML	P26374	656 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	CYP2C19	P33261	490 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	HSPA4	P34932	840 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	GCGR	P47871	477 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	TYRO3	Q06418	890 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	KMT5B	Q4FZB7	885 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	ZSCAN25	Q6NSZ9	544 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	GIMAP6	Q6P9H5	292 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	RBM43	Q6ZSC3	357 aa	Known RBP	4.79	□□□□□ -1.64
BBX-222	ENST00000472032	TRIM50	Q86XT4	487 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	ZNF454	Q8N9F8	522 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	C8orf58	Q8NAV2	365 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	SPC24	Q8NBT2	197 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	ERO1A	Q96HE7	468 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	C16orf45	Q96MC5	204 aa	Predicted RBP	4.79	□□□□□ -1.64
BBX-222	ENST00000472032	TERF2IP	Q9NYB0	399 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	STAP2	Q9UGK3	403 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	PCDHGA4	Q9Y5G9	962 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	MRVI1	Q9Y6F6	885 aa		4.79	□□□□□ -1.64
BBX-222	ENST00000472032	TTC21B	Q7Z4L5	1316 aa		4.78	□□□□□ -1.64
BBX-222	ENST00000472032	TTC21A	Q8NDW8	1320 aa		4.78	□□□□□ -1.64
BBX-222	ENST00000472032	PEAK1	Q9H792	1746 aa		4.78	□□□□□ -1.64
BBX-222	ENST00000472032	RIMS1	Q86UR5	1692 aa	Known RBP	4.78	□□□□□ -1.64
BBX-222	ENST00000472032	TOPAZ1	Q8N9V7	1692 aa		4.78	□□□□□ -1.64
BBX-222	ENST00000472032	PSD	A5PKW4	1024 aa	Predicted RBP	4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms