RNA–Protein interactions for RNA: ENST00000470977.5

SNHG12-205, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-205ENST00000470977 CFHR5Q9BXR6 569 aa17.17■□□□□ 0.34
SNHG12-205ENST00000470977 PAPPA2Q9BXP8 1791 aa17.17■□□□□ 0.34
SNHG12-205ENST00000470977 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
SNHG12-205ENST00000470977 SREBF2Q12772 1141 aa17.16■□□□□ 0.34
SNHG12-205ENST00000470977 PNISRQ8TF01 805 aaKnown RBP17.16■□□□□ 0.34
SNHG12-205ENST00000470977 TRIM17Q9Y577 477 aa17.16■□□□□ 0.34
SNHG12-205ENST00000470977 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
SNHG12-205ENST00000470977 EN2P19622 333 aaPredicted RBP17.15■□□□□ 0.34
SNHG12-205ENST00000470977 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.34
SNHG12-205ENST00000470977 NLRP10Q86W26 655 aa17.15■□□□□ 0.34
SNHG12-205ENST00000470977 EYA3Q99504 573 aa17.15■□□□□ 0.34
SNHG12-205ENST00000470977 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
SNHG12-205ENST00000470977 TRMT112Q9UI30 125 aaKnown RBP17.15■□□□□ 0.34
SNHG12-205ENST00000470977 SCAF8Q9UPN6 1271 aaKnown RBP17.15■□□□□ 0.34
SNHG12-205ENST00000470977 NUDCQ9Y266 331 aa17.15■□□□□ 0.34
SNHG12-205ENST00000470977 GPSM2P81274 684 aa17.14■□□□□ 0.33
SNHG12-205ENST00000470977 TTLL12Q14166 644 aaPredicted RBP17.14■□□□□ 0.33
SNHG12-205ENST00000470977 PRAMEF18Q5VWM3 479 aa17.14■□□□□ 0.33
SNHG12-205ENST00000470977 OTOP1Q7RTM1 612 aa17.14■□□□□ 0.33
SNHG12-205ENST00000470977 LRP10Q7Z4F1 713 aa17.14■□□□□ 0.33
SNHG12-205ENST00000470977 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
SNHG12-205ENST00000470977 ERBB4Q15303 1308 aa17.14■□□□□ 0.33
SNHG12-205ENST00000470977 SH3TC1Q8TE82 1336 aa17.14■□□□□ 0.33
SNHG12-205ENST00000470977 CELF1Q92879 486 aaKnown RBP17.13■□□□□ 0.33
SNHG12-205ENST00000470977 PITPNM2Q9BZ72 1349 aa17.13■□□□□ 0.33
SNHG12-205ENST00000470977 AGBL3Q8NEM8 1001 aa17.12■□□□□ 0.33
SNHG12-205ENST00000470977 TBC1D16Q8TBP0 767 aa17.12■□□□□ 0.33
SNHG12-205ENST00000470977 ZC3H12CQ9C0D7 883 aaKnown RBP17.12■□□□□ 0.33
SNHG12-205ENST00000470977 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
SNHG12-205ENST00000470977 LAMB2P55268 1798 aa17.11■□□□□ 0.33
SNHG12-205ENST00000470977 PDIA6Q15084 440 aa17.11■□□□□ 0.33
SNHG12-205ENST00000470977 HSP90AB3PQ58FF7 597 aa17.11■□□□□ 0.33
SNHG12-205ENST00000470977 RSBN1LQ6PCB5 846 aaPredicted RBP17.11■□□□□ 0.33
SNHG12-205ENST00000470977 MYOZ2Q9NPC6 264 aa17.11■□□□□ 0.33
SNHG12-205ENST00000470977 TAF1P21675 1872 aa17.11■□□□□ 0.33
SNHG12-205ENST00000470977 LRRC37AA6NMS7 1700 aa17.1■□□□□ 0.33
SNHG12-205ENST00000470977 ALDH1A1P00352 501 aa17.1■□□□□ 0.33
SNHG12-205ENST00000470977 USP17L8P0C7I0 530 aa17.1■□□□□ 0.33
SNHG12-205ENST00000470977 TCIRG1Q13488 830 aa17.1■□□□□ 0.33
SNHG12-205ENST00000470977 PROSER3Q2NL68 480 aa17.1■□□□□ 0.33
SNHG12-205ENST00000470977 SLC17A8Q8NDX2 589 aa17.1■□□□□ 0.33
SNHG12-205ENST00000470977 NECTIN2Q92692 538 aa17.1■□□□□ 0.33
SNHG12-205ENST00000470977 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
SNHG12-205ENST00000470977 PTPN22Q9Y2R2 807 aa17.1■□□□□ 0.33
SNHG12-205ENST00000470977 G3V3G9 751 aa17.09■□□□□ 0.33
SNHG12-205ENST00000470977 ANXA1P04083 346 aa17.09■□□□□ 0.33
SNHG12-205ENST00000470977 PTPN12Q05209 780 aaKnown RBP17.09■□□□□ 0.33
SNHG12-205ENST00000470977 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
SNHG12-205ENST00000470977 ZNF428Q96B54 188 aa17.09■□□□□ 0.33
SNHG12-205ENST00000470977 GMLQ99445 158 aa17.09■□□□□ 0.33
SNHG12-205ENST00000470977 SCN9AQ15858 1988 aa17.08■□□□□ 0.33
SNHG12-205ENST00000470977 ZNF609O15014 1411 aa17.08■□□□□ 0.32
SNHG12-205ENST00000470977 EIF2S2P20042 333 aaKnown RBP17.08■□□□□ 0.32
SNHG12-205ENST00000470977 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.32
SNHG12-205ENST00000470977 OTUD5Q96G74 571 aa17.08■□□□□ 0.32
SNHG12-205ENST00000470977 H0YGN5 161 aa17.07■□□□□ 0.32
SNHG12-205ENST00000470977 NF2P35240 595 aa17.07■□□□□ 0.32
SNHG12-205ENST00000470977 SPRYD7Q5W111 196 aa17.07■□□□□ 0.32
SNHG12-205ENST00000470977 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
SNHG12-205ENST00000470977 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
SNHG12-205ENST00000470977 NBPF9Q3BBW0 867 aa17.06■□□□□ 0.32
SNHG12-205ENST00000470977 IFNL1Q8IU54 200 aa17.06■□□□□ 0.32
SNHG12-205ENST00000470977 TMEM106CQ9BVX2 250 aa17.06■□□□□ 0.32
SNHG12-205ENST00000470977 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
SNHG12-205ENST00000470977 UFL1O94874 794 aa17.05■□□□□ 0.32
SNHG12-205ENST00000470977 INHBEP58166 350 aa17.05■□□□□ 0.32
SNHG12-205ENST00000470977 RPS8P62241 208 aaKnown RBP17.05■□□□□ 0.32
SNHG12-205ENST00000470977 ARMC9Q7Z3E5 817 aa17.05■□□□□ 0.32
SNHG12-205ENST00000470977 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
SNHG12-205ENST00000470977 ERO1AQ96HE7 468 aa17.05■□□□□ 0.32
SNHG12-205ENST00000470977 PODXL2Q9NZ53 605 aa17.05■□□□□ 0.32
SNHG12-205ENST00000470977 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
SNHG12-205ENST00000470977 LAMA3Q16787 3333 aa17.04■□□□□ 0.32
SNHG12-205ENST00000470977 PRKG1Q13976 671 aa17.04■□□□□ 0.32
SNHG12-205ENST00000470977 LDLRAD1Q5T700 205 aa17.04■□□□□ 0.32
SNHG12-205ENST00000470977 CD99L2Q8TCZ2 262 aa17.04■□□□□ 0.32
SNHG12-205ENST00000470977 FAM89AQ96GI7 184 aa17.04■□□□□ 0.32
SNHG12-205ENST00000470977 EFCC1Q9HA90 598 aa17.04■□□□□ 0.32
SNHG12-205ENST00000470977 ANKIB1Q9P2G1 1089 aa17.04■□□□□ 0.32
SNHG12-205ENST00000470977 RBBP6Q7Z6E9 1792 aaKnown RBP17.04■□□□□ 0.32
SNHG12-205ENST00000470977 MANSC4A6NHS7 340 aaPredicted RBP17.03■□□□□ 0.32
SNHG12-205ENST00000470977 CHRDL2Q6WN34 429 aa17.03■□□□□ 0.32
SNHG12-205ENST00000470977 GGA1Q9UJY5 639 aa17.03■□□□□ 0.32
SNHG12-205ENST00000470977 COL4A1P02462 1669 aa17.02■□□□□ 0.32
SNHG12-205ENST00000470977 USP17L3A6NCW0 530 aa17.02■□□□□ 0.32
SNHG12-205ENST00000470977 USP17L4A6NCW7 530 aa17.02■□□□□ 0.32
SNHG12-205ENST00000470977 IGF2BP3O00425 579 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNHG12-205ENST00000470977 USP17L1Q7RTZ2 530 aa17.02■□□□□ 0.32
SNHG12-205ENST00000470977 ZNF333Q96JL9 665 aa17.02■□□□□ 0.32
SNHG12-205ENST00000470977 WNT10BO00744 389 aa17.01■□□□□ 0.31
SNHG12-205ENST00000470977 SLC10A4Q96EP9 437 aa17.01■□□□□ 0.31
SNHG12-205ENST00000470977 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
SNHG12-205ENST00000470977 ANGEL1Q9UNK9 670 aaKnown RBP17.01■□□□□ 0.31
SNHG12-205ENST00000470977 NEFMP07197 916 aa17■□□□□ 0.31
SNHG12-205ENST00000470977 CAP1Q01518 475 aa17■□□□□ 0.31
SNHG12-205ENST00000470977 PODNQ7Z5L7 613 aa17■□□□□ 0.31
SNHG12-205ENST00000470977 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
SNHG12-205ENST00000470977 CRHR2Q13324 411 aa16.99■□□□□ 0.31
SNHG12-205ENST00000470977 SLC4A8Q2Y0W8 1093 aa16.99■□□□□ 0.31
SNHG12-205ENST00000470977 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms