RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 HSPA1BP0DMV9 641 aaKnown RBP20.88■□□□□ 0.93
COL9A3-208ENST00000469802 TTLL11Q8NHH1 800 aa20.88■□□□□ 0.93
COL9A3-208ENST00000469802 GPR101Q96P66 508 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-208ENST00000469802 CCDC85AQ96PX6 553 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-208ENST00000469802 ZNF521Q96K83 1311 aa20.87■□□□□ 0.93
COL9A3-208ENST00000469802 POLR2AP24928 1970 aaKnown RBP20.87■□□□□ 0.93
COL9A3-208ENST00000469802 RASSF10A6NK89 507 aa20.87■□□□□ 0.93
COL9A3-208ENST00000469802 PSMD14O00487 310 aa20.87■□□□□ 0.93
COL9A3-208ENST00000469802 RIMBP2O15034 1052 aa20.87■□□□□ 0.93
COL9A3-208ENST00000469802 UBE3BQ7Z3V4 1068 aa20.87■□□□□ 0.93
COL9A3-208ENST00000469802 FAM9BQ8IZU0 186 aa20.87■□□□□ 0.93
COL9A3-208ENST00000469802 BCL2L13Q9BXK5 485 aa20.87■□□□□ 0.93
COL9A3-208ENST00000469802 PGAP2Q9UHJ9 254 aa20.87■□□□□ 0.93
COL9A3-208ENST00000469802 XDHP47989 1333 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 SHTN1A0MZ66 631 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 UFL1O94874 794 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 CASP7P55210 303 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 FKBP5Q13451 457 aaPredicted RBP20.86■□□□□ 0.93
COL9A3-208ENST00000469802 GCKRQ14397 625 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 ANKRD18AQ8IVF6 992 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 TRPM4Q8TD43 1214 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 DNAAF4Q8WXU2 420 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 DPF2Q92785 391 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 PLA2G12BQ9BX93 195 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 ANKIB1Q9P2G1 1089 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 GGA1Q9UJY5 639 aa20.86■□□□□ 0.93
COL9A3-208ENST00000469802 HIRAP54198 1017 aaPredicted RBP20.85■□□□□ 0.93
COL9A3-208ENST00000469802 FMR1Q06787 632 aaKnown RBP eCLIP20.85■□□□□ 0.93
COL9A3-208ENST00000469802 LINS1Q8NG48 757 aa20.85■□□□□ 0.93
COL9A3-208ENST00000469802 CDC5LQ99459 802 aaKnown RBP20.85■□□□□ 0.93
COL9A3-208ENST00000469802 MYH16Q9H6N6 1097 aa20.85■□□□□ 0.93
COL9A3-208ENST00000469802 GREM2Q9H772 168 aa20.85■□□□□ 0.93
COL9A3-208ENST00000469802 CNOT7Q9UIV1 285 aaKnown RBP20.85■□□□□ 0.93
COL9A3-208ENST00000469802 TRAF5O00463 557 aa20.84■□□□□ 0.93
COL9A3-208ENST00000469802 RPS12P25398 132 aaKnown RBP20.84■□□□□ 0.93
COL9A3-208ENST00000469802 VEGFBP49765 207 aa20.84■□□□□ 0.93
COL9A3-208ENST00000469802 DOK7Q18PE1 504 aa20.84■□□□□ 0.93
COL9A3-208ENST00000469802 MICALL2Q8IY33 904 aa20.84■□□□□ 0.93
COL9A3-208ENST00000469802 ZC3H15Q8WU90 426 aaKnown RBP20.84■□□□□ 0.93
COL9A3-208ENST00000469802 ZC3H12CQ9C0D7 883 aaKnown RBP20.84■□□□□ 0.93
COL9A3-208ENST00000469802 KCNQ5Q9NR82 932 aa20.84■□□□□ 0.93
COL9A3-208ENST00000469802 ZBTB12Q9Y330 459 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-208ENST00000469802 COL13A1Q5TAT6 717 aaPredicted RBP20.83■□□□□ 0.93
COL9A3-208ENST00000469802 BSDC1Q9NW68 430 aaPredicted RBP20.83■□□□□ 0.93
COL9A3-208ENST00000469802 CST9Q5W186 159 aa20.82■□□□□ 0.92
COL9A3-208ENST00000469802 MED23Q9ULK4 1368 aa20.82■□□□□ 0.92
COL9A3-208ENST00000469802 DEFB115Q30KQ5 88 aa20.81■□□□□ 0.92
COL9A3-208ENST00000469802 GLIS2Q9BZE0 524 aaPredicted RBP20.81■□□□□ 0.92
COL9A3-208ENST00000469802 H7C1D1 291 aa20.8■□□□□ 0.92
COL9A3-208ENST00000469802 CSF1RP07333 972 aa20.8■□□□□ 0.92
COL9A3-208ENST00000469802 VIL1P09327 827 aaKnown RBP20.8■□□□□ 0.92
COL9A3-208ENST00000469802 ATP2B4P23634 1241 aa20.8■□□□□ 0.92
COL9A3-208ENST00000469802 ABT1Q9ULW3 272 aaKnown RBP20.8■□□□□ 0.92
COL9A3-208ENST00000469802 MINPP1Q9UNW1 487 aa20.8■□□□□ 0.92
COL9A3-208ENST00000469802 EGFRP00533 1210 aa20.79■□□□□ 0.92
COL9A3-208ENST00000469802 FAM161AQ3B820 660 aa20.79■□□□□ 0.92
COL9A3-208ENST00000469802 BEND3Q5T5X7 828 aa20.79■□□□□ 0.92
COL9A3-208ENST00000469802 SAMD7Q7Z3H4 446 aa20.79■□□□□ 0.92
COL9A3-208ENST00000469802 F6X3S4 739 aa20.78■□□□□ 0.92
COL9A3-208ENST00000469802 TLL2Q9Y6L7 1015 aa20.78■□□□□ 0.92
COL9A3-208ENST00000469802 WTIPA6NIX2 430 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-208ENST00000469802 ITGA6P23229 1130 aa20.77■□□□□ 0.92
COL9A3-208ENST00000469802 CDC37L1Q7L3B6 337 aa20.77■□□□□ 0.92
COL9A3-208ENST00000469802 WDR33Q9C0J8 1336 aaKnown RBP20.77■□□□□ 0.91
COL9A3-208ENST00000469802 IGHMBP2P38935 993 aaKnown RBP20.76■□□□□ 0.91
COL9A3-208ENST00000469802 CCT4P50991 539 aaKnown RBP20.76■□□□□ 0.91
COL9A3-208ENST00000469802 TBC1D10BQ4KMP7 808 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-208ENST00000469802 G3V3G9 751 aa20.75■□□□□ 0.91
COL9A3-208ENST00000469802 FOXN1O15353 648 aa20.75■□□□□ 0.91
COL9A3-208ENST00000469802 CELF2O95319 508 aaKnown RBP20.75■□□□□ 0.91
COL9A3-208ENST00000469802 DCAF8Q5TAQ9 597 aa20.75■□□□□ 0.91
COL9A3-208ENST00000469802 RSBN1LQ6PCB5 846 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-208ENST00000469802 PODNQ7Z5L7 613 aa20.75■□□□□ 0.91
COL9A3-208ENST00000469802 AGBL3Q8NEM8 1001 aa20.75■□□□□ 0.91
COL9A3-208ENST00000469802 GMLQ99445 158 aa20.75■□□□□ 0.91
COL9A3-208ENST00000469802 WBP1LQ9NX94 342 aa20.75■□□□□ 0.91
COL9A3-208ENST00000469802 ZNF280AP59817 542 aaPredicted RBP20.74■□□□□ 0.91
COL9A3-208ENST00000469802 FOXO4P98177 505 aa20.74■□□□□ 0.91
COL9A3-208ENST00000469802 KIF4BQ2VIQ3 1234 aa20.74■□□□□ 0.91
COL9A3-208ENST00000469802 SAPCD2Q86UD0 394 aa20.74■□□□□ 0.91
COL9A3-208ENST00000469802 CAPNS2Q96L46 248 aa20.74■□□□□ 0.91
COL9A3-208ENST00000469802 HHIPL1Q96JK4 782 aa20.73■□□□□ 0.91
COL9A3-208ENST00000469802 LEMD3Q9Y2U8 911 aa20.73■□□□□ 0.91
COL9A3-208ENST00000469802 USP17L3A6NCW0 530 aa20.72■□□□□ 0.91
COL9A3-208ENST00000469802 USP17L4A6NCW7 530 aa20.72■□□□□ 0.91
COL9A3-208ENST00000469802 GRM8O00222 908 aa20.72■□□□□ 0.91
COL9A3-208ENST00000469802 ECE1P42892 770 aa20.72■□□□□ 0.91
COL9A3-208ENST00000469802 CYP4F22Q6NT55 531 aa20.72■□□□□ 0.91
COL9A3-208ENST00000469802 USP17L1Q7RTZ2 530 aa20.72■□□□□ 0.91
COL9A3-208ENST00000469802 ANKRD2Q9GZV1 360 aa20.72■□□□□ 0.91
COL9A3-208ENST00000469802 ALDH1L1O75891 902 aa20.71■□□□□ 0.91
COL9A3-208ENST00000469802 KRT26Q7Z3Y9 468 aa20.71■□□□□ 0.91
COL9A3-208ENST00000469802 USP48Q86UV5 1035 aa20.71■□□□□ 0.91
COL9A3-208ENST00000469802 TXNRD3Q86VQ6 643 aa20.71■□□□□ 0.91
COL9A3-208ENST00000469802 MPHOSPH8Q99549 860 aa20.71■□□□□ 0.91
COL9A3-208ENST00000469802 ZNF804BA4D1E1 1349 aa20.71■□□□□ 0.91
COL9A3-208ENST00000469802 IRS2Q9Y4H2 1338 aa20.71■□□□□ 0.91
COL9A3-208ENST00000469802 ECM29Q5VYK3 1845 aa20.71■□□□□ 0.91
COL9A3-208ENST00000469802 ANKRD18BA2A2Z9 1011 aa20.7■□□□□ 0.9
COL9A3-208ENST00000469802 KLRK1P26718 216 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms