RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 HACL1Q9UJ83 578 aa12.08□□□□□ -0.48
TRAPPC12-215ENST00000469147 GJA3Q9Y6H8 435 aa12.08□□□□□ -0.48
TRAPPC12-215ENST00000469147 PPEF1O14829 653 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC12-215ENST00000469147 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC12-215ENST00000469147 FOXO4P98177 505 aa12.07□□□□□ -0.48
TRAPPC12-215ENST00000469147 PDE3AQ14432 1141 aa12.07□□□□□ -0.48
TRAPPC12-215ENST00000469147 RABL6Q3YEC7 729 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC12-215ENST00000469147 LDHDQ86WU2 507 aa12.07□□□□□ -0.48
TRAPPC12-215ENST00000469147 TMEM57Q8N5G2 664 aa12.07□□□□□ -0.48
TRAPPC12-215ENST00000469147 SUCLG2Q96I99 432 aa12.07□□□□□ -0.48
TRAPPC12-215ENST00000469147 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC12-215ENST00000469147 SEC31BQ9NQW1 1179 aa12.07□□□□□ -0.48
TRAPPC12-215ENST00000469147 IARSP41252 1262 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-215ENST00000469147 RPS8P62241 208 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-215ENST00000469147 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC12-215ENST00000469147 PNMA8AQ86V59 439 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC12-215ENST00000469147 GPR101Q96P66 508 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC12-215ENST00000469147 TAF1DQ9H5J8 278 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC12-215ENST00000469147 GREM2Q9H772 168 aa12.06□□□□□ -0.48
TRAPPC12-215ENST00000469147 TNNQ9UQP3 1299 aa12.06□□□□□ -0.48
TRAPPC12-215ENST00000469147 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
TRAPPC12-215ENST00000469147 LRRC37AA6NMS7 1700 aa12.06□□□□□ -0.48
TRAPPC12-215ENST00000469147 ANKRD18BA2A2Z9 1011 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 TMEM88BA6NKF7 163 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 RLBP1P12271 317 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 ITGA6P23229 1130 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 EPHX2P34913 555 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 IFIT5Q13325 482 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 FAM161AQ3B820 660 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 LMBR1LQ6UX01 489 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 ANKRD18AQ8IVF6 992 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 ITPRIPQ8IWB1 547 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 SP8Q8IXZ3 490 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 KAZALD1Q96I82 304 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 MEIS3Q99687 375 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 CHMP4BQ9H444 224 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 BICC1Q9H694 974 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 ABT1Q9ULW3 272 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 LTBP1Q14766 1721 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 DUOX1Q9NRD9 1551 aa12.05□□□□□ -0.48
TRAPPC12-215ENST00000469147 IGHMBP2P38935 993 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-215ENST00000469147 CCDC57Q2TAC2 916 aa12.04□□□□□ -0.48
TRAPPC12-215ENST00000469147 EPHA10Q5JZY3 1008 aa12.04□□□□□ -0.48
TRAPPC12-215ENST00000469147 LARGE2Q8N3Y3 721 aa12.04□□□□□ -0.48
TRAPPC12-215ENST00000469147 GNAI2P04899 355 aa12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 RRP1P56182 461 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 GRM1Q13255 1194 aa12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 MVPQ14764 893 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 DEFB115Q30KQ5 88 aa12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 ANKRD44Q8N8A2 993 aa12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 PANK1Q8TE04 598 aa12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 PSMD1Q99460 953 aa12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 BEGAINQ9BUH8 593 aa12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 BSDC1Q9NW68 430 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 DDX19BQ9UMR2 479 aa12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 CHMP3Q9Y3E7 222 aa12.03□□□□□ -0.48
TRAPPC12-215ENST00000469147 FZD9O00144 591 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 ZBTB7BO15156 539 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 PLIN1O60240 522 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 MTX1Q13505 466 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 AOC3Q16853 763 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 NIM1KQ8IY84 436 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 CNTROBQ8N137 903 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 GPC2Q8N158 579 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 SUPT20HQ8NEM7 779 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 MPHOSPH8Q99549 860 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 VPS33BQ9H267 617 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 KCNQ5Q9NR82 932 aa12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 LRRFIP2Q9Y608 721 aaKnown RBP12.02□□□□□ -0.49
TRAPPC12-215ENST00000469147 SHTN1A0MZ66 631 aa12.01□□□□□ -0.49
TRAPPC12-215ENST00000469147 YDJCA8MPS7 323 aa12.01□□□□□ -0.49
TRAPPC12-215ENST00000469147 GPSM2P81274 684 aa12.01□□□□□ -0.49
TRAPPC12-215ENST00000469147 TAF7LQ5H9L4 462 aa12.01□□□□□ -0.49
TRAPPC12-215ENST00000469147 MAP1SQ66K74 1059 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-215ENST00000469147 MPNDQ8N594 471 aa12.01□□□□□ -0.49
TRAPPC12-215ENST00000469147 L3MBTL3Q96JM7 780 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-215ENST00000469147 RTFDC1Q9BY42 306 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-215ENST00000469147 PODXL2Q9NZ53 605 aa12.01□□□□□ -0.49
TRAPPC12-215ENST00000469147 POLLQ9UGP5 575 aa12.01□□□□□ -0.49
TRAPPC12-215ENST00000469147 SPEF2Q9C093 1822 aa12□□□□□ -0.49
TRAPPC12-215ENST00000469147 CTCFP49711 727 aaPredicted RBP12□□□□□ -0.49
TRAPPC12-215ENST00000469147 FMR1Q06787 632 aaKnown RBP eCLIP12□□□□□ -0.491e-13■■■■■ 51
TRAPPC12-215ENST00000469147 DPP8Q6V1X1 898 aaPredicted RBP12□□□□□ -0.49
TRAPPC12-215ENST00000469147 FBXO3Q9UK99 471 aa12□□□□□ -0.49
TRAPPC12-215ENST00000469147 COG6Q9Y2V7 657 aa12□□□□□ -0.49
TRAPPC12-215ENST00000469147 SCN9AQ15858 1988 aa11.99□□□□□ -0.49
TRAPPC12-215ENST00000469147 PPIP5K2O43314 1243 aa11.99□□□□□ -0.49
TRAPPC12-215ENST00000469147 VEGFBP49765 207 aa11.99□□□□□ -0.49
TRAPPC12-215ENST00000469147 LDHAL6AQ6ZMR3 332 aa11.99□□□□□ -0.49
TRAPPC12-215ENST00000469147 ANKRD2Q9GZV1 360 aa11.99□□□□□ -0.49
TRAPPC12-215ENST00000469147 MINPP1Q9UNW1 487 aa11.99□□□□□ -0.49
TRAPPC12-215ENST00000469147 XDHP47989 1333 aa11.99□□□□□ -0.49
TRAPPC12-215ENST00000469147 MAP2K1Q02750 393 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC12-215ENST00000469147 C20orf194Q5TEA3 1177 aa11.98□□□□□ -0.49
TRAPPC12-215ENST00000469147 EYA3Q99504 573 aa11.98□□□□□ -0.49
TRAPPC12-215ENST00000469147 ANKIB1Q9P2G1 1089 aa11.98□□□□□ -0.49
TRAPPC12-215ENST00000469147 NSFL1CQ9UNZ2 370 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-215ENST00000469147 CNTNAP1P78357 1384 aa11.97□□□□□ -0.49
TRAPPC12-215ENST00000469147 SNAP23O00161 211 aa11.97□□□□□ -0.49
TRAPPC12-215ENST00000469147 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms