RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 GNAT2P19087 354 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 AK2P54819 239 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 CCDC144CPQ8IYA2 1237 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 KLHDC4Q8TBB5 520 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 SSH3Q8TE77 659 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 SSBP05455 408 aaKnown RBP eCLIP16.01■□□□□ 0.15
BRAT1-203ENST00000467558 ZNF853P0CG23 659 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 DBNDD2Q9BQY9 259 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 KAT14Q9H8E8 782 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 LMTK2Q8IWU2 1503 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 SLC26A6Q9BXS9 759 aa16■□□□□ 0.15
BRAT1-203ENST00000467558 ERBB4Q15303 1308 aa16■□□□□ 0.15
BRAT1-203ENST00000467558 PDE8AO60658 829 aa16■□□□□ 0.15
BRAT1-203ENST00000467558 ITGA6P23229 1130 aa16■□□□□ 0.15
BRAT1-203ENST00000467558 ZNF76P36508 570 aa16■□□□□ 0.15
BRAT1-203ENST00000467558 DHX32Q7L7V1 743 aaKnown RBP16■□□□□ 0.15
BRAT1-203ENST00000467558 HELLSQ9NRZ9 838 aa16■□□□□ 0.15
BRAT1-203ENST00000467558 NEURL1BA8MQ27 555 aa15.99■□□□□ 0.15
BRAT1-203ENST00000467558 RAB11FIP4Q86YS3 637 aa15.99■□□□□ 0.15
BRAT1-203ENST00000467558 CKAP2LQ8IYA6 745 aa15.99■□□□□ 0.15
BRAT1-203ENST00000467558 ZSCAN30Q86W11 494 aa15.99■□□□□ 0.15
BRAT1-203ENST00000467558 CCDC12Q8WUD4 166 aaPredicted RBP15.99■□□□□ 0.15
BRAT1-203ENST00000467558 ZNF622Q969S3 477 aaKnown RBP eCLIP15.99■□□□□ 0.15
BRAT1-203ENST00000467558 SGSM2O43147 1006 aa15.99■□□□□ 0.15
BRAT1-203ENST00000467558 PRC1O43663 620 aa15.99■□□□□ 0.15
BRAT1-203ENST00000467558 RUFY3Q7L099 469 aa15.99■□□□□ 0.15
BRAT1-203ENST00000467558 RAB3GAP1Q15042 981 aa15.99■□□□□ 0.15
BRAT1-203ENST00000467558 CCDC96Q2M329 555 aa15.99■□□□□ 0.15
BRAT1-203ENST00000467558 ANKRD2Q9GZV1 360 aa15.99■□□□□ 0.15
BRAT1-203ENST00000467558 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
BRAT1-203ENST00000467558 ANKARQ7Z5J8 1434 aa15.98■□□□□ 0.15
BRAT1-203ENST00000467558 PPFIA3O75145 1194 aa15.98■□□□□ 0.15
BRAT1-203ENST00000467558 RAB34Q9BZG1 259 aa15.98■□□□□ 0.15
BRAT1-203ENST00000467558 ADGRB3O60242 1522 aa15.98■□□□□ 0.15
BRAT1-203ENST00000467558 CFAP100Q494V2 611 aa15.98■□□□□ 0.15
BRAT1-203ENST00000467558 GNPATO15228 680 aa15.98■□□□□ 0.15
BRAT1-203ENST00000467558 HLA-DOAP06340 250 aa15.98■□□□□ 0.15
BRAT1-203ENST00000467558 CCDC178Q5BJE1 867 aa15.98■□□□□ 0.15
BRAT1-203ENST00000467558 CNNM3Q8NE01 707 aa15.98■□□□□ 0.15
BRAT1-203ENST00000467558 CCDC87Q9NVE4 849 aa15.98■□□□□ 0.15
BRAT1-203ENST00000467558 CAVIN2O95810 425 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 BEND3Q5T5X7 828 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 STX8Q9UNK0 236 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 F13A1P00488 732 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 ZNF804AQ7Z570 1209 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 GLI2P10070 1586 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 MADDQ8WXG6 1647 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 KDRP35968 1356 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 TTLL5Q6EMB2 1281 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 MAGEB6P1A0A0J9YX57 407 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 TCIRG1Q13488 830 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 ALG1Q9BT22 464 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 ALKQ9UM73 1620 aa15.97■□□□□ 0.15
BRAT1-203ENST00000467558 EPB41L2O43491 1005 aaKnown RBP15.96■□□□□ 0.15
BRAT1-203ENST00000467558 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.15
BRAT1-203ENST00000467558 RTN1Q16799 776 aa15.96■□□□□ 0.15
BRAT1-203ENST00000467558 ERBB3P21860 1342 aa15.96■□□□□ 0.15
BRAT1-203ENST00000467558 E9PCH4 1651 aa15.96■□□□□ 0.15
BRAT1-203ENST00000467558 PUM3Q15397 648 aaKnown RBP15.96■□□□□ 0.15
BRAT1-203ENST00000467558 CT47A1Q5JQC4 288 aaPredicted RBP15.96■□□□□ 0.15
BRAT1-203ENST00000467558 TRAPPC3LQ5T215 181 aa15.96■□□□□ 0.15
BRAT1-203ENST00000467558 NSFL1CQ9UNZ2 370 aaKnown RBP15.96■□□□□ 0.15
BRAT1-203ENST00000467558 IFIT1BQ5T764 474 aaKnown RBP15.96■□□□□ 0.14
BRAT1-203ENST00000467558 MAGEB6Q8N7X4 407 aa15.96■□□□□ 0.14
BRAT1-203ENST00000467558 KBTBD3Q8NAB2 608 aa15.96■□□□□ 0.14
BRAT1-203ENST00000467558 CCNL1Q9UK58 526 aaPredicted RBP15.95■□□□□ 0.14
BRAT1-203ENST00000467558 ZNF594Q96JF6 807 aaPredicted RBP15.95■□□□□ 0.14
BRAT1-203ENST00000467558 CARD10Q9BWT7 1032 aa15.95■□□□□ 0.14
BRAT1-203ENST00000467558 LUC7LQ9NQ29 371 aaKnown RBP15.95■□□□□ 0.14
BRAT1-203ENST00000467558 XAGE2Q96GT9 111 aa15.95■□□□□ 0.14
BRAT1-203ENST00000467558 TANGO6Q9C0B7 1094 aa15.95■□□□□ 0.14
BRAT1-203ENST00000467558 KCNG4Q8TDN1 519 aa15.95■□□□□ 0.14
BRAT1-203ENST00000467558 CNPY2Q9Y2B0 182 aa15.95■□□□□ 0.14
BRAT1-203ENST00000467558 GNAQP50148 359 aa15.94■□□□□ 0.14
BRAT1-203ENST00000467558 TMEM266Q2M3C6 531 aa15.94■□□□□ 0.14
BRAT1-203ENST00000467558 USP48Q86UV5 1035 aa15.94■□□□□ 0.14
BRAT1-203ENST00000467558 ZC3H12CQ9C0D7 883 aaKnown RBP15.94■□□□□ 0.14
BRAT1-203ENST00000467558 RBM27Q9P2N5 1060 aaKnown RBP15.94■□□□□ 0.14
BRAT1-203ENST00000467558 ZNF165P49910 485 aa15.94■□□□□ 0.14
BRAT1-203ENST00000467558 ZSCAN23Q3MJ62 389 aa15.94■□□□□ 0.14
BRAT1-203ENST00000467558 MTERF4Q7Z6M4 381 aaKnown RBP15.94■□□□□ 0.14
BRAT1-203ENST00000467558 TFCP2L1Q9NZI6 479 aa15.94■□□□□ 0.14
BRAT1-203ENST00000467558 USP25Q9UHP3 1055 aa15.94■□□□□ 0.14
BRAT1-203ENST00000467558 FAM98CQ17RN3 349 aaKnown RBP15.94■□□□□ 0.14
BRAT1-203ENST00000467558 APPBP2Q92624 585 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 SETBP1Q9Y6X0 1596 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 TSPY3P0CV98 308 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 TSPY8P0CW00 308 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 SFPQP23246 707 aaKnown RBP eCLIP15.93■□□□□ 0.14
BRAT1-203ENST00000467558 CCDC102BQ68D86 513 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 DNM1Q05193 864 aaKnown RBP15.93■□□□□ 0.14
BRAT1-203ENST00000467558 STX1AQ16623 288 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 CAGE1Q8TC20 777 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 PYM1Q9BRP8 204 aaKnown RBP15.93■□□□□ 0.14
BRAT1-203ENST00000467558 CABP5Q9NP86 173 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 DENND2AQ9ULE3 1009 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 BMP15O95972 392 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 ATP5JP18859 108 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 MIGA1Q8NAN2 632 aa15.93■□□□□ 0.14
BRAT1-203ENST00000467558 PLCG2P16885 1265 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms