RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 RIMBP2O15034 1052 aa15.43■□□□□ 0.06
GTF3A-205ENST00000466776 CA12O43570 354 aa15.43■□□□□ 0.06
GTF3A-205ENST00000466776 ZNF853P0CG23 659 aa15.43■□□□□ 0.06
GTF3A-205ENST00000466776 CCDC152Q4G0S7 254 aa15.43■□□□□ 0.06
GTF3A-205ENST00000466776 CCDC191Q8NCU4 936 aa15.43■□□□□ 0.06
GTF3A-205ENST00000466776 TRPM4Q8TD43 1214 aa15.43■□□□□ 0.06
GTF3A-205ENST00000466776 ZC3H12CQ9C0D7 883 aaKnown RBP15.43■□□□□ 0.06
GTF3A-205ENST00000466776 SPEF2Q9C093 1822 aa15.43■□□□□ 0.06
GTF3A-205ENST00000466776 SCN9AQ15858 1988 aa15.42■□□□□ 0.06
GTF3A-205ENST00000466776 ECE2O60344 883 aa15.42■□□□□ 0.06
GTF3A-205ENST00000466776 GPSM2P81274 684 aa15.42■□□□□ 0.06
GTF3A-205ENST00000466776 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
GTF3A-205ENST00000466776 MYD88Q99836 296 aa15.42■□□□□ 0.06
GTF3A-205ENST00000466776 AKAP11Q9UKA4 1901 aa15.42■□□□□ 0.06
GTF3A-205ENST00000466776 HIRAP54198 1017 aaPredicted RBP15.41■□□□□ 0.06
GTF3A-205ENST00000466776 TBC1D16Q8TBP0 767 aa15.41■□□□□ 0.06
GTF3A-205ENST00000466776 CWC25Q9NXE8 425 aaPredicted RBP15.41■□□□□ 0.06
GTF3A-205ENST00000466776 ANKIB1Q9P2G1 1089 aa15.41■□□□□ 0.06
GTF3A-205ENST00000466776 POLLQ9UGP5 575 aa15.41■□□□□ 0.06
GTF3A-205ENST00000466776 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
GTF3A-205ENST00000466776 CASP8AP2Q9UKL3 1982 aa15.41■□□□□ 0.06
GTF3A-205ENST00000466776 ELL2O00472 640 aaPredicted RBP15.4■□□□□ 0.06
GTF3A-205ENST00000466776 PDE8AO60658 829 aa15.4■□□□□ 0.06
GTF3A-205ENST00000466776 UFL1O94874 794 aa15.4■□□□□ 0.06
GTF3A-205ENST00000466776 PCCAP05165 728 aaPredicted RBP15.4■□□□□ 0.06
GTF3A-205ENST00000466776 BRPF1P55201 1214 aaPredicted RBP15.4■□□□□ 0.06
GTF3A-205ENST00000466776 DCPSQ96C86 337 aaKnown RBP15.4■□□□□ 0.06
GTF3A-205ENST00000466776 PHAXQ9H814 394 aaKnown RBP15.4■□□□□ 0.06
GTF3A-205ENST00000466776 PODXL2Q9NZ53 605 aa15.4■□□□□ 0.06
GTF3A-205ENST00000466776 GGA1Q9UJY5 639 aa15.4■□□□□ 0.06
GTF3A-205ENST00000466776 COL4A1P02462 1669 aa15.39■□□□□ 0.05
GTF3A-205ENST00000466776 AOC2O75106 756 aa15.39■□□□□ 0.05
GTF3A-205ENST00000466776 NOGQ13253 232 aa15.39■□□□□ 0.05
GTF3A-205ENST00000466776 DOK7Q18PE1 504 aa15.39■□□□□ 0.05
GTF3A-205ENST00000466776 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
GTF3A-205ENST00000466776 SAMD7Q7Z3H4 446 aa15.39■□□□□ 0.05
GTF3A-205ENST00000466776 KRT26Q7Z3Y9 468 aa15.39■□□□□ 0.05
GTF3A-205ENST00000466776 METTL22Q9BUU2 404 aaPredicted RBP15.39■□□□□ 0.05
GTF3A-205ENST00000466776 SHTN1A0MZ66 631 aa15.38■□□□□ 0.05
GTF3A-205ENST00000466776 HUNKP57058 714 aa15.38■□□□□ 0.05
GTF3A-205ENST00000466776 NEXNQ0ZGT2 675 aa15.38■□□□□ 0.05
GTF3A-205ENST00000466776 KIF4BQ2VIQ3 1234 aa15.38■□□□□ 0.05
GTF3A-205ENST00000466776 USP48Q86UV5 1035 aa15.38■□□□□ 0.05
GTF3A-205ENST00000466776 ANKRD18AQ8IVF6 992 aa15.38■□□□□ 0.05
GTF3A-205ENST00000466776 C2orf69Q8N8R5 385 aa15.38■□□□□ 0.05
GTF3A-205ENST00000466776 ABHD8Q96I13 439 aa15.38■□□□□ 0.05
GTF3A-205ENST00000466776 CDC5LQ99459 802 aaKnown RBP15.38■□□□□ 0.05
GTF3A-205ENST00000466776 STK31Q9BXU1 1019 aa15.38■□□□□ 0.05
GTF3A-205ENST00000466776 XDHP47989 1333 aa15.38■□□□□ 0.05
GTF3A-205ENST00000466776 RBM26Q5T8P6 1007 aaKnown RBP15.37■□□□□ 0.05
GTF3A-205ENST00000466776 SULF1Q8IWU6 871 aa15.37■□□□□ 0.05
GTF3A-205ENST00000466776 SEC31BQ9NQW1 1179 aa15.37■□□□□ 0.05
GTF3A-205ENST00000466776 RTL9Q8NET4 1388 aa15.36■□□□□ 0.05
GTF3A-205ENST00000466776 ZNF609O15014 1411 aa15.36■□□□□ 0.05
GTF3A-205ENST00000466776 VIL1P09327 827 aaKnown RBP15.36■□□□□ 0.05
GTF3A-205ENST00000466776 C8orf58Q8NAV2 365 aa15.36■□□□□ 0.05
GTF3A-205ENST00000466776 GBA2Q9HCG7 927 aaPredicted RBP15.36■□□□□ 0.05
GTF3A-205ENST00000466776 MAP3K2Q9Y2U5 619 aa15.36■□□□□ 0.05
GTF3A-205ENST00000466776 ATP2B4P23634 1241 aa15.35■□□□□ 0.05
GTF3A-205ENST00000466776 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
GTF3A-205ENST00000466776 AGBL3Q8NEM8 1001 aa15.35■□□□□ 0.05
GTF3A-205ENST00000466776 CCDC102AQ96A19 550 aa15.35■□□□□ 0.05
GTF3A-205ENST00000466776 CCDC85AQ96PX6 553 aaPredicted RBP15.35■□□□□ 0.05
GTF3A-205ENST00000466776 CTSWP56202 376 aa15.34■□□□□ 0.05
GTF3A-205ENST00000466776 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
GTF3A-205ENST00000466776 RGMBQ6NW40 437 aa15.34■□□□□ 0.05
GTF3A-205ENST00000466776 KCNQ5Q9NR82 932 aa15.34■□□□□ 0.05
GTF3A-205ENST00000466776 GGA3Q9NZ52 723 aa15.34■□□□□ 0.05
GTF3A-205ENST00000466776 TSKSQ9UJT2 592 aa15.34■□□□□ 0.05
GTF3A-205ENST00000466776 PI4KAP2A4QPH2 592 aa15.33■□□□□ 0.04
GTF3A-205ENST00000466776 RSBN1LQ6PCB5 846 aaPredicted RBP15.33■□□□□ 0.04
GTF3A-205ENST00000466776 PODNQ7Z5L7 613 aa15.33■□□□□ 0.04
GTF3A-205ENST00000466776 PI4KAP1Q8N8J0 262 aa15.33■□□□□ 0.04
GTF3A-205ENST00000466776 ADM5C9JUS6 153 aa15.32■□□□□ 0.04
GTF3A-205ENST00000466776 EGFRP00533 1210 aa15.32■□□□□ 0.04
GTF3A-205ENST00000466776 DSG3P32926 999 aa15.32■□□□□ 0.04
GTF3A-205ENST00000466776 CCDC27Q2M243 656 aa15.32■□□□□ 0.04
GTF3A-205ENST00000466776 JARID2Q92833 1246 aaPredicted RBP15.32■□□□□ 0.04
GTF3A-205ENST00000466776 PAPPA2Q9BXP8 1791 aa15.31■□□□□ 0.04
GTF3A-205ENST00000466776 USP17L3A6NCW0 530 aa15.31■□□□□ 0.04
GTF3A-205ENST00000466776 USP17L4A6NCW7 530 aa15.31■□□□□ 0.04
GTF3A-205ENST00000466776 CCDC85CA6NKD9 419 aa15.31■□□□□ 0.04
GTF3A-205ENST00000466776 USP17L8P0C7I0 530 aa15.31■□□□□ 0.04
GTF3A-205ENST00000466776 ZNF157P51786 506 aaPredicted RBP15.31■□□□□ 0.04
GTF3A-205ENST00000466776 ZNF280AP59817 542 aaPredicted RBP15.31■□□□□ 0.04
GTF3A-205ENST00000466776 TWISTNBQ3B726 338 aaPredicted RBP15.31■□□□□ 0.04
GTF3A-205ENST00000466776 USP17L1Q7RTZ2 530 aa15.31■□□□□ 0.04
GTF3A-205ENST00000466776 TSPYL6Q8N831 410 aa15.31■□□□□ 0.04
GTF3A-205ENST00000466776 TSR2Q969E8 191 aaKnown RBP15.31■□□□□ 0.04
GTF3A-205ENST00000466776 BSDC1Q9NW68 430 aaPredicted RBP15.31■□□□□ 0.04
GTF3A-205ENST00000466776 MED23Q9ULK4 1368 aa15.31■□□□□ 0.04
GTF3A-205ENST00000466776 IGHMBP2P38935 993 aaKnown RBP15.3■□□□□ 0.04
GTF3A-205ENST00000466776 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
GTF3A-205ENST00000466776 OGFOD1Q8N543 542 aa15.3■□□□□ 0.04
GTF3A-205ENST00000466776 TTLL11Q8NHH1 800 aa15.3■□□□□ 0.04
GTF3A-205ENST00000466776 MYO3BQ8WXR4 1341 aa15.3■□□□□ 0.04
GTF3A-205ENST00000466776 PITPNM2Q9BZ72 1349 aa15.3■□□□□ 0.04
GTF3A-205ENST00000466776 MYOZ2Q9NPC6 264 aa15.3■□□□□ 0.04
GTF3A-205ENST00000466776 SAGE1Q9NXZ1 904 aa15.3■□□□□ 0.04
GTF3A-205ENST00000466776 IL16Q14005 1332 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms