RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 OTOP1Q7RTM1 612 aa12.2□□□□□ -0.46
ABCF3-205ENST00000466416 NLRP10Q86W26 655 aa12.2□□□□□ -0.46
ABCF3-205ENST00000466416 R3HDMLQ9H3Y0 253 aa12.2□□□□□ -0.46
ABCF3-205ENST00000466416 DUOX1Q9NRD9 1551 aa12.2□□□□□ -0.46
ABCF3-205ENST00000466416 G3V3G9 751 aa12.19□□□□□ -0.46
ABCF3-205ENST00000466416 NF2P35240 595 aa12.19□□□□□ -0.46
ABCF3-205ENST00000466416 INHBEP58166 350 aa12.19□□□□□ -0.46
ABCF3-205ENST00000466416 GPSM2P81274 684 aa12.19□□□□□ -0.46
ABCF3-205ENST00000466416 TCIRG1Q13488 830 aa12.19□□□□□ -0.46
ABCF3-205ENST00000466416 TTLL12Q14166 644 aaPredicted RBP12.19□□□□□ -0.46
ABCF3-205ENST00000466416 DCAF8Q5TAQ9 597 aa12.19□□□□□ -0.46
ABCF3-205ENST00000466416 RSBN1LQ6PCB5 846 aaPredicted RBP12.19□□□□□ -0.46
ABCF3-205ENST00000466416 LAMB4A4D0S4 1761 aa12.19□□□□□ -0.46
ABCF3-205ENST00000466416 ANKRD36CQ5JPF3 1778 aa12.18□□□□□ -0.46
ABCF3-205ENST00000466416 USP17L8P0C7I0 530 aa12.18□□□□□ -0.46
ABCF3-205ENST00000466416 EN2P19622 333 aaPredicted RBP12.18□□□□□ -0.46
ABCF3-205ENST00000466416 LRP10Q7Z4F1 713 aa12.18□□□□□ -0.46
ABCF3-205ENST00000466416 TBC1D16Q8TBP0 767 aa12.18□□□□□ -0.46
ABCF3-205ENST00000466416 ARMC5Q96C12 935 aa12.18□□□□□ -0.46
ABCF3-205ENST00000466416 TMEM106CQ9BVX2 250 aa12.18□□□□□ -0.46
ABCF3-205ENST00000466416 MYOZ2Q9NPC6 264 aa12.18□□□□□ -0.46
ABCF3-205ENST00000466416 PTPN22Q9Y2R2 807 aa12.18□□□□□ -0.46
ABCF3-205ENST00000466416 ZNF609O15014 1411 aa12.18□□□□□ -0.46
ABCF3-205ENST00000466416 MKI67P46013 3256 aaKnown RBP12.17□□□□□ -0.46
ABCF3-205ENST00000466416 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
ABCF3-205ENST00000466416 PDIA6Q15084 440 aa12.17□□□□□ -0.46
ABCF3-205ENST00000466416 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
ABCF3-205ENST00000466416 ARMC9Q7Z3E5 817 aa12.17□□□□□ -0.46
ABCF3-205ENST00000466416 SLC17A8Q8NDX2 589 aa12.17□□□□□ -0.46
ABCF3-205ENST00000466416 CELF1Q92879 486 aaKnown RBP12.17□□□□□ -0.46
ABCF3-205ENST00000466416 ERO1AQ96HE7 468 aa12.17□□□□□ -0.46
ABCF3-205ENST00000466416 THUMPD2Q9BTF0 503 aaKnown RBP12.17□□□□□ -0.46
ABCF3-205ENST00000466416 CLSPNQ9HAW4 1339 aa12.16□□□□□ -0.46
ABCF3-205ENST00000466416 MANSC4A6NHS7 340 aaPredicted RBP12.16□□□□□ -0.46
ABCF3-205ENST00000466416 NEFMP07197 916 aa12.16□□□□□ -0.46
ABCF3-205ENST00000466416 RPS8P62241 208 aaKnown RBP12.16□□□□□ -0.46
ABCF3-205ENST00000466416 PRAMEF18Q5VWM3 479 aa12.16□□□□□ -0.46
ABCF3-205ENST00000466416 SPRYD7Q5W111 196 aa12.16□□□□□ -0.46
ABCF3-205ENST00000466416 GMLQ99445 158 aa12.16□□□□□ -0.46
ABCF3-205ENST00000466416 PODXL2Q9NZ53 605 aa12.16□□□□□ -0.46
ABCF3-205ENST00000466416 TRIOBPQ9H2D6 2365 aa12.16□□□□□ -0.46
ABCF3-205ENST00000466416 EIF2S2P20042 333 aaKnown RBP12.15□□□□□ -0.46
ABCF3-205ENST00000466416 PTPN12Q05209 780 aaKnown RBP12.15□□□□□ -0.46
ABCF3-205ENST00000466416 COPS6Q7L5N1 327 aa12.15□□□□□ -0.46
ABCF3-205ENST00000466416 IFNL1Q8IU54 200 aa12.15□□□□□ -0.46
ABCF3-205ENST00000466416 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
ABCF3-205ENST00000466416 LRRC37AA6NMS7 1700 aa12.14□□□□□ -0.47
ABCF3-205ENST00000466416 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
ABCF3-205ENST00000466416 LDLRAD1Q5T700 205 aa12.14□□□□□ -0.47
ABCF3-205ENST00000466416 EFCC1Q9HA90 598 aa12.14□□□□□ -0.47
ABCF3-205ENST00000466416 LAMB2P55268 1798 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 USP17L3A6NCW0 530 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 USP17L4A6NCW7 530 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 H0YGN5 161 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 UFL1O94874 794 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 MMP14P50281 582 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 AIMP1Q12904 312 aaKnown RBP12.13□□□□□ -0.47
ABCF3-205ENST00000466416 PROSER3Q2NL68 480 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 NBPF9Q3BBW0 867 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 USP17L1Q7RTZ2 530 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 PODNQ7Z5L7 613 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 NBPF11Q86T75 865 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 ANKIB1Q9P2G1 1089 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 GGA1Q9UJY5 639 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 SCAF8Q9UPN6 1271 aaKnown RBP12.13□□□□□ -0.47
ABCF3-205ENST00000466416 CEP290O15078 2479 aa12.13□□□□□ -0.47
ABCF3-205ENST00000466416 DDX60Q8IY21 1712 aaKnown RBP12.12□□□□□ -0.47
ABCF3-205ENST00000466416 ANXA1P04083 346 aa12.12□□□□□ -0.47
ABCF3-205ENST00000466416 ZBTB48P10074 688 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-205ENST00000466416 OTUD7BQ6GQQ9 843 aa12.12□□□□□ -0.47
ABCF3-205ENST00000466416 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
ABCF3-205ENST00000466416 XAGE3Q8WTP9 111 aa12.12□□□□□ -0.47
ABCF3-205ENST00000466416 ZNF333Q96JL9 665 aa12.12□□□□□ -0.47
ABCF3-205ENST00000466416 RBBP6Q7Z6E9 1792 aaKnown RBP12.12□□□□□ -0.47
ABCF3-205ENST00000466416 TAF1P21675 1872 aa12.12□□□□□ -0.47
ABCF3-205ENST00000466416 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
ABCF3-205ENST00000466416 KDM3BQ7LBC6 1761 aa12.11□□□□□ -0.47
ABCF3-205ENST00000466416 WNT10BO00744 389 aa12.11□□□□□ -0.47
ABCF3-205ENST00000466416 ARHGEF6Q15052 776 aa12.11□□□□□ -0.47
ABCF3-205ENST00000466416 CD99L2Q8TCZ2 262 aa12.11□□□□□ -0.47
ABCF3-205ENST00000466416 FAM89AQ96GI7 184 aa12.11□□□□□ -0.47
ABCF3-205ENST00000466416 UNCXA6NJT0 531 aa12.1□□□□□ -0.47
ABCF3-205ENST00000466416 SP3Q02447 781 aa12.1□□□□□ -0.47
ABCF3-205ENST00000466416 PRKG1Q13976 671 aa12.1□□□□□ -0.47
ABCF3-205ENST00000466416 SLC4A8Q2Y0W8 1093 aa12.1□□□□□ -0.47
ABCF3-205ENST00000466416 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
ABCF3-205ENST00000466416 APOBEC3FQ8IUX4 373 aaKnown RBP12.1□□□□□ -0.47
ABCF3-205ENST00000466416 TSPYL4Q9UJ04 414 aa12.1□□□□□ -0.47
ABCF3-205ENST00000466416 ANGEL1Q9UNK9 670 aaKnown RBP12.1□□□□□ -0.47
ABCF3-205ENST00000466416 HTTP42858 3142 aa12.09□□□□□ -0.47
ABCF3-205ENST00000466416 IGF2BP3O00425 579 aaKnown RBP eCLIP12.09□□□□□ -0.47
ABCF3-205ENST00000466416 IRS4O14654 1257 aaPredicted RBP12.09□□□□□ -0.47
ABCF3-205ENST00000466416 HSP90B1P14625 803 aaKnown RBP12.09□□□□□ -0.47
ABCF3-205ENST00000466416 MAP3K11Q16584 847 aa12.09□□□□□ -0.47
ABCF3-205ENST00000466416 ISCA1Q9BUE6 129 aa12.09□□□□□ -0.47
ABCF3-205ENST00000466416 BABAM1Q9NWV8 329 aa12.09□□□□□ -0.47
ABCF3-205ENST00000466416 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
ABCF3-205ENST00000466416 SZT2Q5T011 3432 aa12.08□□□□□ -0.48
ABCF3-205ENST00000466416 CRHR2Q13324 411 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms