RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 UFL1O94874 794 aa27.73■■■□□ 2.03
LIME1-203ENST00000465591 DOK7Q18PE1 504 aa27.73■■■□□ 2.03
LIME1-203ENST00000465591 MAP1SQ66K74 1059 aaPredicted RBP27.73■■■□□ 2.03
LIME1-203ENST00000465591 KLRG1Q96E93 195 aa27.73■■■□□ 2.03
LIME1-203ENST00000465591 CDC5LQ99459 802 aaKnown RBP27.73■■■□□ 2.03
LIME1-203ENST00000465591 ANKIB1Q9P2G1 1089 aa27.73■■■□□ 2.03
LIME1-203ENST00000465591 WTIPA6NIX2 430 aaPredicted RBP27.72■■■□□ 2.03
LIME1-203ENST00000465591 KCNQ5Q9NR82 932 aa27.72■■■□□ 2.03
LIME1-203ENST00000465591 CSF1RP07333 972 aa27.71■■■□□ 2.03
LIME1-203ENST00000465591 FAM161AQ3B820 660 aa27.71■■■□□ 2.03
LIME1-203ENST00000465591 MRPL50Q8N5N7 158 aaKnown RBP27.71■■■□□ 2.03
LIME1-203ENST00000465591 EYA3Q99504 573 aa27.71■■■□□ 2.03
LIME1-203ENST00000465591 GGA1Q9UJY5 639 aa27.71■■■□□ 2.03
LIME1-203ENST00000465591 SHTN1A0MZ66 631 aa27.7■■■□□ 2.02
LIME1-203ENST00000465591 ECE2O60344 883 aa27.7■■■□□ 2.02
LIME1-203ENST00000465591 BSDC1Q9NW68 430 aaPredicted RBP27.7■■■□□ 2.02
LIME1-203ENST00000465591 XDHP47989 1333 aa27.69■■■□□ 2.02
LIME1-203ENST00000465591 PSMD14O00487 310 aa27.69■■■□□ 2.02
LIME1-203ENST00000465591 TNIP1Q15025 636 aa27.69■■■□□ 2.02
LIME1-203ENST00000465591 MINPP1Q9UNW1 487 aa27.69■■■□□ 2.02
LIME1-203ENST00000465591 ZBTB12Q9Y330 459 aaPredicted RBP27.69■■■□□ 2.02
LIME1-203ENST00000465591 ITGA6P23229 1130 aa27.68■■■□□ 2.02
LIME1-203ENST00000465591 FOXO4P98177 505 aa27.68■■■□□ 2.02
LIME1-203ENST00000465591 TRMT2AQ8IZ69 625 aaKnown RBP27.68■■■□□ 2.02
LIME1-203ENST00000465591 CNTROBQ8N137 903 aa27.68■■■□□ 2.02
LIME1-203ENST00000465591 SSH1Q8WYL5 1049 aa27.68■■■□□ 2.02
LIME1-203ENST00000465591 ZC3H12CQ9C0D7 883 aaKnown RBP27.68■■■□□ 2.02
LIME1-203ENST00000465591 EPHA10Q5JZY3 1008 aa27.67■■■□□ 2.02
LIME1-203ENST00000465591 SLC4A10Q6U841 1118 aa27.67■■■□□ 2.02
LIME1-203ENST00000465591 USP50Q70EL3 339 aaPredicted RBP27.67■■■□□ 2.02
LIME1-203ENST00000465591 BCL2L13Q9BXK5 485 aa27.67■■■□□ 2.02
LIME1-203ENST00000465591 ADARB2Q9NS39 739 aaKnown RBP27.67■■■□□ 2.02
LIME1-203ENST00000465591 PSME4Q14997 1843 aa27.66■■■□□ 2.02
LIME1-203ENST00000465591 GRM8O00222 908 aa27.65■■■□□ 2.02
LIME1-203ENST00000465591 CREBZFQ9NS37 354 aa27.65■■■□□ 2.02
LIME1-203ENST00000465591 ATP2B4P23634 1241 aa27.64■■■□□ 2.02
LIME1-203ENST00000465591 HIRAP54198 1017 aaPredicted RBP27.64■■■□□ 2.02
LIME1-203ENST00000465591 FMR1Q06787 632 aaKnown RBP eCLIP27.64■■■□□ 2.02
LIME1-203ENST00000465591 JMYQ8N9B5 988 aa27.64■■■□□ 2.02
LIME1-203ENST00000465591 TRPM4Q8TD43 1214 aa27.64■■■□□ 2.02
LIME1-203ENST00000465591 SRCIN1Q9C0H9 1055 aa27.64■■■□□ 2.02
LIME1-203ENST00000465591 CNOT7Q9UIV1 285 aaKnown RBP27.64■■■□□ 2.02
LIME1-203ENST00000465591 ALDH1L1O75891 902 aa27.63■■■□□ 2.01
LIME1-203ENST00000465591 IGHMBP2P38935 993 aaKnown RBP27.63■■■□□ 2.01
LIME1-203ENST00000465591 MIER1Q8N108 512 aa27.63■■■□□ 2.01
LIME1-203ENST00000465591 A0A1B0GUL6 1792 aa27.63■■■□□ 2.01
LIME1-203ENST00000465591 MICALL2Q8IY33 904 aa27.62■■■□□ 2.01
LIME1-203ENST00000465591 CCT4P50991 539 aaKnown RBP27.61■■■□□ 2.01
LIME1-203ENST00000465591 DIEXFQ68CQ4 756 aaKnown RBP27.6■■■□□ 2.01
LIME1-203ENST00000465591 LMBR1LQ6UX01 489 aa27.6■■■□□ 2.01
LIME1-203ENST00000465591 DPF2Q92785 391 aa27.6■■■□□ 2.01
LIME1-203ENST00000465591 C9orf78Q9NZ63 289 aaPredicted RBP27.6■■■□□ 2.01
LIME1-203ENST00000465591 ZNF646O15015 1829 aaPredicted RBP27.6■■■□□ 2.01
LIME1-203ENST00000465591 TRPM7Q96QT4 1865 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 ANKRD18BA2A2Z9 1011 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 TMEM88BA6NKF7 163 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 TRAF5O00463 557 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 VIL1P09327 827 aaKnown RBP27.59■■■□□ 2.01
LIME1-203ENST00000465591 TXNRD3Q86VQ6 643 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 KAZALD1Q96I82 304 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 MPHOSPH8Q99549 860 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 MKRN1Q9UHC7 482 aaKnown RBP27.59■■■□□ 2.01
LIME1-203ENST00000465591 CHMP3Q9Y3E7 222 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 PCNTO95613 3336 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 PTPRCP08575 1304 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 MED23Q9ULK4 1368 aa27.59■■■□□ 2.01
LIME1-203ENST00000465591 G3V3G9 751 aa27.58■■■□□ 2.01
LIME1-203ENST00000465591 EGFRP00533 1210 aa27.58■■■□□ 2.01
LIME1-203ENST00000465591 NBPF7P0C2Y1 421 aaPredicted RBP27.58■■■□□ 2.01
LIME1-203ENST00000465591 KLRK1P26718 216 aa27.58■■■□□ 2.01
LIME1-203ENST00000465591 DCAF8Q5TAQ9 597 aa27.58■■■□□ 2.01
LIME1-203ENST00000465591 SAMD7Q7Z3H4 446 aa27.58■■■□□ 2.01
LIME1-203ENST00000465591 SUCLG2Q96I99 432 aa27.58■■■□□ 2.01
LIME1-203ENST00000465591 POLR2AP24928 1970 aaKnown RBP27.58■■■□□ 2.01
LIME1-203ENST00000465591 IFIT5Q13325 482 aaKnown RBP27.57■■■□□ 2
LIME1-203ENST00000465591 ALDH1L2Q3SY69 923 aa27.57■■■□□ 2
LIME1-203ENST00000465591 PGAP2Q9UHJ9 254 aa27.57■■■□□ 2
LIME1-203ENST00000465591 H7C1D1 291 aa27.56■■■□□ 2
LIME1-203ENST00000465591 RPS12P25398 132 aaKnown RBP27.56■■■□□ 2
LIME1-203ENST00000465591 CHRNDQ07001 517 aa27.56■■■□□ 2
LIME1-203ENST00000465591 ZNF594Q96JF6 807 aaPredicted RBP27.56■■■□□ 2
LIME1-203ENST00000465591 UTYO14607 1347 aa27.56■■■□□ 2
LIME1-203ENST00000465591 SNAP23O00161 211 aa27.55■■■□□ 2
LIME1-203ENST00000465591 SMC4Q9NTJ3 1288 aa27.55■■■□□ 2
LIME1-203ENST00000465591 LEMD3Q9Y2U8 911 aa27.55■■■□□ 2
LIME1-203ENST00000465591 ZNF804BA4D1E1 1349 aa27.54■■■□□ 2
LIME1-203ENST00000465591 CNTNAP1P78357 1384 aa27.54■■■□□ 2
LIME1-203ENST00000465591 TBC1D10BQ4KMP7 808 aaPredicted RBP27.54■■■□□ 2
LIME1-203ENST00000465591 GLIS2Q9BZE0 524 aaPredicted RBP27.54■■■□□ 2
LIME1-203ENST00000465591 ANKRD2Q9GZV1 360 aa27.54■■■□□ 2
LIME1-203ENST00000465591 RSBN1LQ6PCB5 846 aaPredicted RBP27.53■■■□□ 2
LIME1-203ENST00000465591 PODNQ7Z5L7 613 aa27.53■■■□□ 2
LIME1-203ENST00000465591 HELBQ8NG08 1087 aaPredicted RBP27.53■■■□□ 2
LIME1-203ENST00000465591 ZNF609O15014 1411 aa27.52■■■□□ 2
LIME1-203ENST00000465591 TAF5LO75529 589 aa27.52■■■□□ 2
LIME1-203ENST00000465591 ZC3H15Q8WU90 426 aaKnown RBP27.52■■■□□ 2
LIME1-203ENST00000465591 IRS2Q9Y4H2 1338 aa27.51■■□□□ 1.99
LIME1-203ENST00000465591 CCDC57Q2TAC2 916 aa27.51■■□□□ 1.99
LIME1-203ENST00000465591 RBM26Q5T8P6 1007 aaKnown RBP27.51■■□□□ 1.99
LIME1-203ENST00000465591 CST9Q5W186 159 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 193.7 ms