RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PDE3AQ14432 1141 aa17.59■□□□□ 0.41
HDAC6-215ENST00000465457 TNIP1Q15025 636 aa17.59■□□□□ 0.41
HDAC6-215ENST00000465457 TAF7Q15545 349 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-215ENST00000465457 GIGYF2Q6Y7W6 1299 aaKnown RBP17.59■□□□□ 0.41
HDAC6-215ENST00000465457 MPNDQ8N594 471 aa17.59■□□□□ 0.41
HDAC6-215ENST00000465457 SUPT20HQ8NEM7 779 aa17.59■□□□□ 0.41
HDAC6-215ENST00000465457 NLRP3Q96P20 1036 aa17.59■□□□□ 0.41
HDAC6-215ENST00000465457 CSRNP1Q96S65 589 aa17.59■□□□□ 0.41
HDAC6-215ENST00000465457 THUMPD2Q9BTF0 503 aaKnown RBP17.59■□□□□ 0.41
HDAC6-215ENST00000465457 RTL9Q8NET4 1388 aa17.58■□□□□ 0.4
HDAC6-215ENST00000465457 H7C1D1 291 aa17.58■□□□□ 0.4
HDAC6-215ENST00000465457 DBNDD1Q9H9R9 158 aa17.58■□□□□ 0.4
HDAC6-215ENST00000465457 MS4A1P11836 297 aa17.57■□□□□ 0.4
HDAC6-215ENST00000465457 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-215ENST00000465457 RARSP54136 660 aaKnown RBP17.57■□□□□ 0.4
HDAC6-215ENST00000465457 EIF4A1P60842 406 aaKnown RBP17.57■□□□□ 0.4
HDAC6-215ENST00000465457 AAMPQ13685 434 aa17.57■□□□□ 0.4
HDAC6-215ENST00000465457 RBM26Q5T8P6 1007 aaKnown RBP17.57■□□□□ 0.4
HDAC6-215ENST00000465457 LRP10Q7Z4F1 713 aa17.57■□□□□ 0.4
HDAC6-215ENST00000465457 SP8Q8IXZ3 490 aa17.57■□□□□ 0.4
HDAC6-215ENST00000465457 KCNQ5Q9NR82 932 aa17.57■□□□□ 0.4
HDAC6-215ENST00000465457 CENPFP49454 3210 aa17.57■□□□□ 0.4
HDAC6-215ENST00000465457 ANXA1P04083 346 aa17.56■□□□□ 0.4
HDAC6-215ENST00000465457 PROSER3Q2NL68 480 aa17.56■□□□□ 0.4
HDAC6-215ENST00000465457 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
HDAC6-215ENST00000465457 RASAL3Q86YV0 1011 aa17.56■□□□□ 0.4
HDAC6-215ENST00000465457 C2orf69Q8N8R5 385 aa17.56■□□□□ 0.4
HDAC6-215ENST00000465457 CCDC102AQ96A19 550 aa17.56■□□□□ 0.4
HDAC6-215ENST00000465457 TMX4Q9H1E5 349 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-215ENST00000465457 BRCA2P51587 3418 aa17.56■□□□□ 0.4
HDAC6-215ENST00000465457 PAPPA2Q9BXP8 1791 aa17.56■□□□□ 0.4
HDAC6-215ENST00000465457 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
HDAC6-215ENST00000465457 B4GALNT3Q6L9W6 998 aa17.55■□□□□ 0.4
HDAC6-215ENST00000465457 EXOC6Q8TAG9 804 aa17.55■□□□□ 0.4
HDAC6-215ENST00000465457 UTP14AQ9BVJ6 771 aaKnown RBP17.55■□□□□ 0.4
HDAC6-215ENST00000465457 GGA3Q9NZ52 723 aa17.55■□□□□ 0.4
HDAC6-215ENST00000465457 PSME4Q14997 1843 aa17.55■□□□□ 0.4
HDAC6-215ENST00000465457 HTATSF1O43719 755 aaKnown RBP17.54■□□□□ 0.4
HDAC6-215ENST00000465457 CDCA5Q96FF9 252 aa17.54■□□□□ 0.4
HDAC6-215ENST00000465457 PLIN1O60240 522 aa17.53■□□□□ 0.4
HDAC6-215ENST00000465457 BBOX1O75936 387 aa17.53■□□□□ 0.4
HDAC6-215ENST00000465457 ZNF853P0CG23 659 aa17.53■□□□□ 0.4
HDAC6-215ENST00000465457 GRAPQ13588 217 aa17.53■□□□□ 0.4
HDAC6-215ENST00000465457 PARP10Q53GL7 1025 aa17.53■□□□□ 0.4
HDAC6-215ENST00000465457 GRAPLQ8TC17 118 aaPredicted RBP17.53■□□□□ 0.4
HDAC6-215ENST00000465457 DPF2Q92785 391 aa17.53■□□□□ 0.4
HDAC6-215ENST00000465457 TSR2Q969E8 191 aaKnown RBP17.53■□□□□ 0.4
HDAC6-215ENST00000465457 SCAF8Q9UPN6 1271 aaKnown RBP17.53■□□□□ 0.4
HDAC6-215ENST00000465457 RIMBP2O15034 1052 aa17.52■□□□□ 0.4
HDAC6-215ENST00000465457 EXOSC9Q06265 439 aaKnown RBP17.52■□□□□ 0.4
HDAC6-215ENST00000465457 PDIA6Q15084 440 aa17.52■□□□□ 0.4
HDAC6-215ENST00000465457 KIF4BQ2VIQ3 1234 aa17.52■□□□□ 0.4
HDAC6-215ENST00000465457 ALDH1L2Q3SY69 923 aa17.52■□□□□ 0.4
HDAC6-215ENST00000465457 MOB2Q70IA6 237 aa17.52■□□□□ 0.4
HDAC6-215ENST00000465457 ZNF296Q8WUU4 475 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-215ENST00000465457 DCPSQ96C86 337 aaKnown RBP17.52■□□□□ 0.4
HDAC6-215ENST00000465457 CRBNQ96SW2 442 aa17.52■□□□□ 0.4
HDAC6-215ENST00000465457 BCAR3O75815 825 aa17.51■□□□□ 0.39
HDAC6-215ENST00000465457 TBC1D8O95759 1140 aa17.51■□□□□ 0.39
HDAC6-215ENST00000465457 DOK7Q18PE1 504 aa17.51■□□□□ 0.39
HDAC6-215ENST00000465457 KIF16BQ96L93 1317 aa17.5■□□□□ 0.39
HDAC6-215ENST00000465457 ZNF646O15015 1829 aaPredicted RBP17.5■□□□□ 0.39
HDAC6-215ENST00000465457 ECE2O60344 883 aa17.5■□□□□ 0.39
HDAC6-215ENST00000465457 DDX46Q7L014 1031 aaKnown RBP17.5■□□□□ 0.39
HDAC6-215ENST00000465457 NLRP10Q86W26 655 aa17.5■□□□□ 0.39
HDAC6-215ENST00000465457 POLLQ9UGP5 575 aa17.5■□□□□ 0.39
HDAC6-215ENST00000465457 WASHC4Q2M389 1173 aa17.49■□□□□ 0.39
HDAC6-215ENST00000465457 CELF1Q92879 486 aaKnown RBP17.49■□□□□ 0.39
HDAC6-215ENST00000465457 RBBP6Q7Z6E9 1792 aaKnown RBP17.48■□□□□ 0.39
HDAC6-215ENST00000465457 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
HDAC6-215ENST00000465457 IPO8O15397 1037 aaKnown RBP17.48■□□□□ 0.39
HDAC6-215ENST00000465457 GPSM2P81274 684 aa17.48■□□□□ 0.39
HDAC6-215ENST00000465457 HABP4Q5JVS0 413 aaKnown RBP17.48■□□□□ 0.39
HDAC6-215ENST00000465457 ZKSCAN2Q63HK3 967 aa17.48■□□□□ 0.39
HDAC6-215ENST00000465457 SULF1Q8IWU6 871 aa17.48■□□□□ 0.39
HDAC6-215ENST00000465457 NSFL1CQ9UNZ2 370 aaKnown RBP17.48■□□□□ 0.39
HDAC6-215ENST00000465457 ERBB4Q15303 1308 aa17.47■□□□□ 0.39
HDAC6-215ENST00000465457 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
HDAC6-215ENST00000465457 C20orf194Q5TEA3 1177 aa17.47■□□□□ 0.39
HDAC6-215ENST00000465457 ANGEL2Q5VTE6 544 aaKnown RBP17.47■□□□□ 0.39
HDAC6-215ENST00000465457 SMC4Q9NTJ3 1288 aa17.47■□□□□ 0.39
HDAC6-215ENST00000465457 HDAC9Q9UKV0 1011 aa17.47■□□□□ 0.39
HDAC6-215ENST00000465457 SH3TC1Q8TE82 1336 aa17.47■□□□□ 0.39
HDAC6-215ENST00000465457 C6orf229H3BNL8 230 aa17.46■□□□□ 0.39
HDAC6-215ENST00000465457 RPS12P25398 132 aaKnown RBP17.46■□□□□ 0.39
HDAC6-215ENST00000465457 R3HDMLQ9H3Y0 253 aa17.46■□□□□ 0.39
HDAC6-215ENST00000465457 MBIPQ9NS73 344 aa17.46■□□□□ 0.39
HDAC6-215ENST00000465457 BABAM1Q9NWV8 329 aa17.46■□□□□ 0.39
HDAC6-215ENST00000465457 TRMT112Q9UI30 125 aaKnown RBP17.46■□□□□ 0.39
HDAC6-215ENST00000465457 LAS1LQ9Y4W2 734 aaKnown RBP17.46■□□□□ 0.39
HDAC6-215ENST00000465457 AIMP1Q12904 312 aaKnown RBP17.45■□□□□ 0.38
HDAC6-215ENST00000465457 MKRN3Q13064 507 aaKnown RBP17.45■□□□□ 0.38
HDAC6-215ENST00000465457 NECTIN2Q92692 538 aa17.45■□□□□ 0.38
HDAC6-215ENST00000465457 FRAT1Q92837 279 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-215ENST00000465457 SZT2Q5T011 3432 aa17.44■□□□□ 0.38
HDAC6-215ENST00000465457 CHL1O00533 1208 aa17.44■□□□□ 0.38
HDAC6-215ENST00000465457 PKN2Q16513 984 aaKnown RBP17.44■□□□□ 0.38
HDAC6-215ENST00000465457 PRAMEF18Q5VWM3 479 aa17.44■□□□□ 0.38
HDAC6-215ENST00000465457 XAGE3Q8WTP9 111 aa17.44■□□□□ 0.38
HDAC6-215ENST00000465457 UBE2Q2LH0YL09 131 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms