RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 SCAND2PQ9GZW5 306 aaPredicted RBP20.05■□□□□ 0.8
ACTB-207ENST00000462494 LAMB4A4D0S4 1761 aa20.05■□□□□ 0.8
ACTB-207ENST00000462494 ELP1O95163 1332 aa20.05■□□□□ 0.8
ACTB-207ENST00000462494 H3BQV1 296 aa20.04■□□□□ 0.8
ACTB-207ENST00000462494 IL15P40933 162 aaPredicted RBP20.04■□□□□ 0.8
ACTB-207ENST00000462494 HSP90AA2PQ14568 343 aaPredicted RBP20.04■□□□□ 0.8
ACTB-207ENST00000462494 IFFO2Q5TF58 517 aa20.04■□□□□ 0.8
ACTB-207ENST00000462494 NUP62CLQ9H1M0 184 aa20.04■□□□□ 0.8
ACTB-207ENST00000462494 ZNF330Q9Y3S2 320 aaPredicted RBP20.04■□□□□ 0.8
ACTB-207ENST00000462494 GLI3P10071 1580 aa20.04■□□□□ 0.8
ACTB-207ENST00000462494 SH3TC1Q8TE82 1336 aa20.04■□□□□ 0.8
ACTB-207ENST00000462494 STOX1Q6ZVD7 989 aa20.04■□□□□ 0.8
ACTB-207ENST00000462494 WDR17Q8IZU2 1322 aa20.04■□□□□ 0.8
ACTB-207ENST00000462494 MAP3K11Q16584 847 aa20.03■□□□□ 0.8
ACTB-207ENST00000462494 ERVV-2B6SEH9 535 aa20.03■□□□□ 0.8
ACTB-207ENST00000462494 IFIT1P09914 478 aaKnown RBP20.03■□□□□ 0.8
ACTB-207ENST00000462494 CCDC191Q8NCU4 936 aa20.03■□□□□ 0.8
ACTB-207ENST00000462494 LEO1Q8WVC0 666 aaPredicted RBP20.03■□□□□ 0.8
ACTB-207ENST00000462494 TTC12Q9H892 705 aaPredicted RBP20.03■□□□□ 0.8
ACTB-207ENST00000462494 DACT1Q9NYF0 836 aa20.03■□□□□ 0.8
ACTB-207ENST00000462494 EYA2O00167 538 aa20.02■□□□□ 0.8
ACTB-207ENST00000462494 SCRN1Q12765 414 aa20.02■□□□□ 0.8
ACTB-207ENST00000462494 HELLSQ9NRZ9 838 aa20.02■□□□□ 0.8
ACTB-207ENST00000462494 PALLDQ8WX93 1383 aa20.02■□□□□ 0.79
ACTB-207ENST00000462494 A0A1B0GUL7 405 aa20.02■□□□□ 0.79
ACTB-207ENST00000462494 FOSBP53539 338 aa20.02■□□□□ 0.79
ACTB-207ENST00000462494 CKAP2LQ8IYA6 745 aa20.02■□□□□ 0.79
ACTB-207ENST00000462494 PUS3Q9BZE2 481 aaKnown RBP20.02■□□□□ 0.79
ACTB-207ENST00000462494 NAP1L2Q9ULW6 460 aaPredicted RBP20.02■□□□□ 0.79
ACTB-207ENST00000462494 BRINP3Q76B58 766 aa20.01■□□□□ 0.79
ACTB-207ENST00000462494 TNMDQ9H2S6 317 aa20.01■□□□□ 0.79
ACTB-207ENST00000462494 GPR108Q9NPR9 543 aa20.01■□□□□ 0.79
ACTB-207ENST00000462494 A0A0G2JLW4 131 aa20■□□□□ 0.79
ACTB-207ENST00000462494 HMGB1P09429 215 aaKnown RBP20■□□□□ 0.79
ACTB-207ENST00000462494 APOBRQ0VD83 1088 aa20■□□□□ 0.79
ACTB-207ENST00000462494 DHX32Q7L7V1 743 aaKnown RBP20■□□□□ 0.79
ACTB-207ENST00000462494 STRN4Q9NRL3 753 aa20■□□□□ 0.79
ACTB-207ENST00000462494 AP5Z1O43299 807 aa20■□□□□ 0.79
ACTB-207ENST00000462494 TERF1P54274 439 aa20■□□□□ 0.79
ACTB-207ENST00000462494 ZMYM1Q5SVZ6 1142 aa20■□□□□ 0.79
ACTB-207ENST00000462494 BICD2Q8TD16 824 aa20■□□□□ 0.79
ACTB-207ENST00000462494 CCDC85AQ96PX6 553 aaPredicted RBP20■□□□□ 0.79
ACTB-207ENST00000462494 PARP4Q9UKK3 1724 aaKnown RBP20■□□□□ 0.79
ACTB-207ENST00000462494 RRP9O43818 475 aaKnown RBP19.99■□□□□ 0.79
ACTB-207ENST00000462494 IL2RBP14784 551 aa19.99■□□□□ 0.79
ACTB-207ENST00000462494 FKBP4Q02790 459 aaKnown RBP eCLIP19.99■□□□□ 0.792e-6■■□□□ 13.5
ACTB-207ENST00000462494 TYRO3Q06418 890 aa19.99■□□□□ 0.79
ACTB-207ENST00000462494 RESTQ13127 1097 aa19.99■□□□□ 0.79
ACTB-207ENST00000462494 DNTTIP2Q5QJE6 756 aaKnown RBP19.99■□□□□ 0.79
ACTB-207ENST00000462494 KLHL34Q8N239 644 aa19.99■□□□□ 0.79
ACTB-207ENST00000462494 DSCC1Q9BVC3 393 aa19.99■□□□□ 0.79
ACTB-207ENST00000462494 HSPD1P10809 573 aaKnown RBP19.99■□□□□ 0.79
ACTB-207ENST00000462494 HSPA2P54652 639 aa19.99■□□□□ 0.79
ACTB-207ENST00000462494 CCT2P78371 535 aaKnown RBP19.99■□□□□ 0.79
ACTB-207ENST00000462494 CEBPZQ03701 1054 aaKnown RBP19.99■□□□□ 0.79
ACTB-207ENST00000462494 UQCRHLA0A096LP55 91 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 RNF113AO15541 343 aaKnown RBP19.98■□□□□ 0.79
ACTB-207ENST00000462494 PPFIA3O75145 1194 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 UQCRHP07919 91 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 CCDC57Q2TAC2 916 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 GORABQ5T7V8 394 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 CHST3Q7LGC8 479 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 CEP126Q9P2H0 1117 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 E7EWF7 191 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 PFKFB2O60825 505 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 PGBD1Q96JS3 809 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 MRVI1Q9Y6F6 885 aa19.98■□□□□ 0.79
ACTB-207ENST00000462494 KCPQ6ZWJ8 1503 aa19.97■□□□□ 0.79
ACTB-207ENST00000462494 MAST3O60307 1309 aa19.97■□□□□ 0.79
ACTB-207ENST00000462494 NR1I2O75469 434 aa19.97■□□□□ 0.79
ACTB-207ENST00000462494 NUP188Q5SRE5 1749 aa19.97■□□□□ 0.79
ACTB-207ENST00000462494 SPC24Q8NBT2 197 aa19.97■□□□□ 0.79
ACTB-207ENST00000462494 FAM200AQ8TCP9 573 aa19.97■□□□□ 0.79
ACTB-207ENST00000462494 TJP1Q07157 1748 aa19.97■□□□□ 0.79
ACTB-207ENST00000462494 M0R2C6 588 aa19.96■□□□□ 0.79
ACTB-207ENST00000462494 CIAO1O76071 339 aa19.96■□□□□ 0.79
ACTB-207ENST00000462494 C17orf53Q8N3J3 647 aaPredicted RBP19.96■□□□□ 0.79
ACTB-207ENST00000462494 SMARCC2Q8TAQ2 1214 aa19.96■□□□□ 0.79
ACTB-207ENST00000462494 ZSCAN16Q9H4T2 348 aaPredicted RBP19.96■□□□□ 0.79
ACTB-207ENST00000462494 DDX19AQ9NUU7 478 aaKnown RBP19.96■□□□□ 0.79
ACTB-207ENST00000462494 NKX1-1Q15270 411 aaPredicted RBP19.96■□□□□ 0.79
ACTB-207ENST00000462494 LUZP1Q86V48 1076 aa19.96■□□□□ 0.79
ACTB-207ENST00000462494 NSUN7Q8NE18 718 aaKnown RBP19.96■□□□□ 0.79
ACTB-207ENST00000462494 LLPHQ9BRT6 129 aaKnown RBP19.96■□□□□ 0.79
ACTB-207ENST00000462494 NCOA5Q9HCD5 579 aaKnown RBP19.96■□□□□ 0.79
ACTB-207ENST00000462494 PTPDC1A2A3K4 754 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 EVA1CP58658 441 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 RBM10P98175 930 aaKnown RBP19.95■□□□□ 0.78
ACTB-207ENST00000462494 EXOSC10Q01780 885 aaKnown RBP19.95■□□□□ 0.78
ACTB-207ENST00000462494 ANO6Q4KMQ2 910 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 TTC39AQ5SRH9 613 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 TTLL5Q6EMB2 1281 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 PIBF1Q8WXW3 757 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 ATG3Q9NT62 314 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 CFAP45Q9UL16 551 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 CTDNEP1O95476 244 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 ADORA1P30542 326 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 NOLC1Q14978 699 aaKnown RBP eCLIP19.95■□□□□ 0.78
ACTB-207ENST00000462494 CCDC158Q5M9N0 1113 aa19.95■□□□□ 0.78
ACTB-207ENST00000462494 CLSTN2Q9H4D0 955 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms