RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 RC3H1Q5TC82 1133 aaKnown RBP14.93□□□□□ -0.02
COL4A6-204ENST00000461897 NOL7Q9UMY1 257 aaKnown RBP14.93□□□□□ -0.02
COL4A6-204ENST00000461897 ZNF609O15014 1411 aa14.92□□□□□ -0.02
COL4A6-204ENST00000461897 OFD1O75665 1012 aa14.92□□□□□ -0.02
COL4A6-204ENST00000461897 SMIM5Q71RC9 77 aa14.92□□□□□ -0.02
COL4A6-204ENST00000461897 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
COL4A6-204ENST00000461897 BCL11BQ9C0K0 894 aaPredicted RBP14.92□□□□□ -0.02
COL4A6-204ENST00000461897 IL25Q9H293 177 aa14.92□□□□□ -0.02
COL4A6-204ENST00000461897 GREM2Q9H772 168 aa14.92□□□□□ -0.02
COL4A6-204ENST00000461897 RBM27Q9P2N5 1060 aaKnown RBP14.92□□□□□ -0.02
COL4A6-204ENST00000461897 RAD50Q92878 1312 aa14.92□□□□□ -0.02
COL4A6-204ENST00000461897 LRP5O75197 1615 aa14.92□□□□□ -0.02
COL4A6-204ENST00000461897 ZNF500O60304 480 aaPredicted RBP14.91□□□□□ -0.02
COL4A6-204ENST00000461897 PDE8AO60658 829 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 IFIT5Q13325 482 aaKnown RBP14.91□□□□□ -0.02
COL4A6-204ENST00000461897 PARP10Q53GL7 1025 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 TMEM87AQ8NBN3 555 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 SH3TC1Q8TE82 1336 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 NIP7Q9Y221 180 aaKnown RBP eCLIP14.91□□□□□ -0.02
COL4A6-204ENST00000461897 C4AP0C0L4 1744 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 RIC1Q4ADV7 1423 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 SGSM2O43147 1006 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 RPS6KA4O75676 772 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 NTSR2O95665 410 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 MCM5P33992 734 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 CLEC4GQ6UXB4 293 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 KRT27Q7Z3Y8 459 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 AMIGO3Q86WK7 504 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 DBNDD2Q9BQY9 259 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 UTP14AQ9BVJ6 771 aaKnown RBP14.91□□□□□ -0.02
COL4A6-204ENST00000461897 GPR108Q9NPR9 543 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 ZNF652Q9Y2D9 606 aa14.91□□□□□ -0.02
COL4A6-204ENST00000461897 FAM177BA6PVY3 158 aa14.9□□□□□ -0.02
COL4A6-204ENST00000461897 RRP9O43818 475 aaKnown RBP14.9□□□□□ -0.02
COL4A6-204ENST00000461897 ITGA6P23229 1130 aa14.9□□□□□ -0.02
COL4A6-204ENST00000461897 NSFL1CQ9UNZ2 370 aaKnown RBP14.9□□□□□ -0.02
COL4A6-204ENST00000461897 WDR33Q9C0J8 1336 aaKnown RBP14.89□□□□□ -0.03
COL4A6-204ENST00000461897 GNPATO15228 680 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 MSNP26038 577 aaKnown RBP14.89□□□□□ -0.03
COL4A6-204ENST00000461897 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.89□□□□□ -0.03
COL4A6-204ENST00000461897 SYAP1Q96A49 352 aaPredicted RBP14.89□□□□□ -0.03
COL4A6-204ENST00000461897 EVI5LQ96CN4 794 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 AK7Q96M32 723 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 TTC14Q96N46 770 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 BOLA2Q9H3K6 86 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 BCL2L12Q9HB09 334 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 CASZ1Q86V15 1759 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 COL24A1Q17RW2 1714 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 RGL2O15211 777 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 HCLS1P14317 486 aaPredicted RBP14.89□□□□□ -0.03
COL4A6-204ENST00000461897 ATP5JP18859 108 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 FAM196AQ6ZSG2 479 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 LRRC4BQ9NT99 713 aa14.89□□□□□ -0.03
COL4A6-204ENST00000461897 SYCE3A1L190 88 aa14.88□□□□□ -0.03
COL4A6-204ENST00000461897 TAF7LQ5H9L4 462 aa14.88□□□□□ -0.03
COL4A6-204ENST00000461897 LSG1Q9H089 658 aaKnown RBP14.88□□□□□ -0.03
COL4A6-204ENST00000461897 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.88□□□□□ -0.03
COL4A6-204ENST00000461897 NARFQ9UHQ1 456 aa14.88□□□□□ -0.03
COL4A6-204ENST00000461897 ANKRD18BA2A2Z9 1011 aa14.87□□□□□ -0.03
COL4A6-204ENST00000461897 TIMM10P62072 90 aa14.87□□□□□ -0.03
COL4A6-204ENST00000461897 ZNF772Q68DY9 489 aaPredicted RBP14.87□□□□□ -0.03
COL4A6-204ENST00000461897 CHAMP1Q96JM3 812 aa14.87□□□□□ -0.03
COL4A6-204ENST00000461897 SRP68Q9UHB9 627 aaKnown RBP14.87□□□□□ -0.03
COL4A6-204ENST00000461897 RIPOR2Q9Y4F9 1068 aa14.87□□□□□ -0.03
COL4A6-204ENST00000461897 RPAP1Q9BWH6 1393 aaPredicted RBP14.87□□□□□ -0.03
COL4A6-204ENST00000461897 A0A1B0GUL7 405 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 RBM6P78332 1123 aaKnown RBP14.86□□□□□ -0.03
COL4A6-204ENST00000461897 USPL1Q5W0Q7 1092 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 KCNB2Q92953 911 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 CEP126Q9P2H0 1117 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 ZKSCAN5Q9Y2L8 839 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 RTCBQ9Y3I0 505 aaKnown RBP14.86□□□□□ -0.03
COL4A6-204ENST00000461897 UBR3Q6ZT12 1888 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 PHF14O94880 888 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 TBC1D9BQ66K14 1250 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 CWC27Q6UX04 472 aaKnown RBP14.86□□□□□ -0.03
COL4A6-204ENST00000461897 EDC3Q96F86 508 aaKnown RBP14.86□□□□□ -0.03
COL4A6-204ENST00000461897 NEUROD6Q96NK8 337 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 UPF3BQ9BZI7 483 aaKnown RBP14.86□□□□□ -0.03
COL4A6-204ENST00000461897 SNX14Q9Y5W7 946 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 SPEF2Q9C093 1822 aa14.86□□□□□ -0.03
COL4A6-204ENST00000461897 TRIM37O94972 964 aa14.85□□□□□ -0.03
COL4A6-204ENST00000461897 LDHAL6AQ6ZMR3 332 aa14.85□□□□□ -0.03
COL4A6-204ENST00000461897 DIAPH3Q9NSV4 1193 aa14.85□□□□□ -0.03
COL4A6-204ENST00000461897 NDUFB9Q9Y6M9 179 aa14.85□□□□□ -0.03
COL4A6-204ENST00000461897 COL4A1P02462 1669 aa14.85□□□□□ -0.03
COL4A6-204ENST00000461897 ARHGEF1Q92888 912 aaKnown RBP14.84□□□□□ -0.03
COL4A6-204ENST00000461897 HAUS7Q99871 368 aa14.84□□□□□ -0.03
COL4A6-204ENST00000461897 TSPY26PQ9H489 355 aa14.84□□□□□ -0.03
COL4A6-204ENST00000461897 CCDC39Q9UFE4 941 aa14.84□□□□□ -0.03
COL4A6-204ENST00000461897 RTL9Q8NET4 1388 aa14.84□□□□□ -0.03
COL4A6-204ENST00000461897 UVSSAQ2YD98 709 aa14.84□□□□□ -0.03
COL4A6-204ENST00000461897 BICDL1Q6ZP65 573 aa14.84□□□□□ -0.03
COL4A6-204ENST00000461897 KIAA1211Q6ZU35 1233 aa14.84□□□□□ -0.03
COL4A6-204ENST00000461897 VGLL2Q8N8G2 317 aa14.84□□□□□ -0.03
COL4A6-204ENST00000461897 FAM184AQ8NB25 1140 aa14.84□□□□□ -0.03
COL4A6-204ENST00000461897 ZPR1O75312 459 aa14.83□□□□□ -0.04
COL4A6-204ENST00000461897 ADORA1P30542 326 aa14.83□□□□□ -0.04
COL4A6-204ENST00000461897 ERFEQ4G0M1 354 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms