RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 KLF18A0A0U1RQI7 1052 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 A0A1B0GVL5 298 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 NBPF6Q5VWK0 638 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 NUP133Q8WUM0 1156 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 NBPF4Q96M43 638 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 ATP10DQ9P241 1426 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 SART3Q15020 963 aaKnown RBP16.79■□□□□ 0.28
NCL-207ENST00000461347 HSP90B2PQ58FF3 399 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 PCMTD1Q96MG8 357 aaPredicted RBP16.79■□□□□ 0.28
NCL-207ENST00000461347 BABAM1Q9NWV8 329 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 IPO7O95373 1038 aaKnown RBP16.79■□□□□ 0.28
NCL-207ENST00000461347 KCNA6P17658 529 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 MARCKSP29966 332 aaPredicted RBP16.79■□□□□ 0.28
NCL-207ENST00000461347 ANKLE2Q86XL3 938 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 DBNDD2Q9BQY9 259 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 ZNF213O14771 459 aa16.78■□□□□ 0.28
NCL-207ENST00000461347 CDKL5O76039 1030 aa16.78■□□□□ 0.28
NCL-207ENST00000461347 DHX32Q7L7V1 743 aaKnown RBP16.78■□□□□ 0.28
NCL-207ENST00000461347 TRIM22Q8IYM9 498 aa16.78■□□□□ 0.28
NCL-207ENST00000461347 KIAA1524Q8TCG1 905 aa16.78■□□□□ 0.28
NCL-207ENST00000461347 DDX21Q9NR30 783 aaKnown RBP eCLIP16.78■□□□□ 0.28
NCL-207ENST00000461347 DNAI1Q9UI46 699 aa16.78■□□□□ 0.28
NCL-207ENST00000461347 RNMTO43148 476 aaKnown RBP16.78■□□□□ 0.28
NCL-207ENST00000461347 GTPBP4Q9BZE4 634 aaKnown RBP16.78■□□□□ 0.28
NCL-207ENST00000461347 SLU7O95391 586 aaKnown RBP16.78■□□□□ 0.28
NCL-207ENST00000461347 ZSCAN25Q6NSZ9 544 aa16.78■□□□□ 0.28
NCL-207ENST00000461347 IFNKQ9P0W0 207 aa16.78■□□□□ 0.28
NCL-207ENST00000461347 ARHGAP31Q2M1Z3 1444 aa16.77■□□□□ 0.28
NCL-207ENST00000461347 NRXN1Q9ULB1 1477 aa16.77■□□□□ 0.28
NCL-207ENST00000461347 ADGRB1O14514 1584 aa16.77■□□□□ 0.28
NCL-207ENST00000461347 PPFIBP1Q86W92 1011 aa16.77■□□□□ 0.28
NCL-207ENST00000461347 MICU3Q86XE3 530 aa16.77■□□□□ 0.28
NCL-207ENST00000461347 IP6K1Q92551 441 aa16.77■□□□□ 0.28
NCL-207ENST00000461347 HOXB7P09629 217 aa16.77■□□□□ 0.28
NCL-207ENST00000461347 GTF2E1P29083 439 aaPredicted RBP16.77■□□□□ 0.28
NCL-207ENST00000461347 KLHL10Q6JEL2 608 aa16.77■□□□□ 0.28
NCL-207ENST00000461347 VGLL3A8MV65 326 aa16.77■□□□□ 0.27
NCL-207ENST00000461347 OTUD7BQ6GQQ9 843 aa16.77■□□□□ 0.27
NCL-207ENST00000461347 NFATC2IPQ8NCF5 419 aa16.77■□□□□ 0.27
NCL-207ENST00000461347 CNNM3Q8NE01 707 aa16.77■□□□□ 0.27
NCL-207ENST00000461347 IGSF1Q8N6C5 1336 aa16.76■□□□□ 0.27
NCL-207ENST00000461347 LTKP29376 864 aa16.76■□□□□ 0.27
NCL-207ENST00000461347 FILIP1LQ4L180 1135 aa16.76■□□□□ 0.27
NCL-207ENST00000461347 MRVI1Q9Y6F6 885 aa16.76■□□□□ 0.27
NCL-207ENST00000461347 FEZ1Q99689 392 aa16.76■□□□□ 0.27
NCL-207ENST00000461347 TIMM10P62072 90 aa16.76■□□□□ 0.27
NCL-207ENST00000461347 METTL24Q5JXM2 366 aa16.76■□□□□ 0.27
NCL-207ENST00000461347 SYT10Q6XYQ8 523 aa16.76■□□□□ 0.27
NCL-207ENST00000461347 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.76■□□□□ 0.27
NCL-207ENST00000461347 CCDC150Q8NCX0 1101 aa16.76■□□□□ 0.27
NCL-207ENST00000461347 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
NCL-207ENST00000461347 HSP90AB3PQ58FF7 597 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 SEC62Q99442 399 aaKnown RBP16.75■□□□□ 0.27
NCL-207ENST00000461347 PAG1Q9NWQ8 432 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 ZSCAN12O43309 604 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 SYKP43405 635 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 UBASH3AP57075 661 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 IL25Q9H293 177 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 OGFRQ9NZT2 677 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 SPTLC2O15270 562 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 XBP1P17861 261 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 FAM160A1Q05DH4 1040 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 PROSER3Q2NL68 480 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 KIF6Q6ZMV9 814 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 TOM1L2Q6ZVM7 507 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 ZSWIM4Q9H7M6 989 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 TLR7Q9NYK1 1049 aaKnown RBP16.75■□□□□ 0.27
NCL-207ENST00000461347 ROBO2Q9HCK4 1378 aa16.75■□□□□ 0.27
NCL-207ENST00000461347 ZNF397Q8NF99 534 aaPredicted RBP16.74■□□□□ 0.27
NCL-207ENST00000461347 A0A087WWV3 80 aa16.74■□□□□ 0.27
NCL-207ENST00000461347 BMS1Q14692 1282 aaKnown RBP16.74■□□□□ 0.27
NCL-207ENST00000461347 SKIDA1Q1XH10 827 aa16.74■□□□□ 0.27
NCL-207ENST00000461347 CPLX3Q8WVH0 158 aa16.74■□□□□ 0.27
NCL-207ENST00000461347 MAP4K1Q92918 833 aa16.74■□□□□ 0.27
NCL-207ENST00000461347 TNNI3KQ59H18 835 aa16.74■□□□□ 0.27
NCL-207ENST00000461347 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
NCL-207ENST00000461347 DACH1Q9UI36 760 aa16.74■□□□□ 0.27
NCL-207ENST00000461347 FPGT-TNNI3KV9GXZ4 949 aa16.74■□□□□ 0.27
NCL-207ENST00000461347 GTF2F1P35269 517 aaKnown RBP eCLIP16.73■□□□□ 0.27
NCL-207ENST00000461347 TMEM87AQ8NBN3 555 aa16.73■□□□□ 0.27
NCL-207ENST00000461347 GNG11P61952 73 aa16.73■□□□□ 0.27
NCL-207ENST00000461347 AIDAQ96BJ3 306 aa16.73■□□□□ 0.27
NCL-207ENST00000461347 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
NCL-207ENST00000461347 MTMR7Q9Y216 660 aa16.73■□□□□ 0.27
NCL-207ENST00000461347 PTPRMP28827 1452 aa16.73■□□□□ 0.27
NCL-207ENST00000461347 VPS37DQ86XT2 251 aa16.73■□□□□ 0.27
NCL-207ENST00000461347 GTF3C6Q969F1 213 aa16.73■□□□□ 0.27
NCL-207ENST00000461347 MYO3AQ8NEV4 1616 aa16.73■□□□□ 0.27
NCL-207ENST00000461347 GCP02774 474 aa16.72■□□□□ 0.27
NCL-207ENST00000461347 ELF2Q15723 593 aa16.72■□□□□ 0.27
NCL-207ENST00000461347 IFNL2Q8IZJ0 200 aa16.72■□□□□ 0.27
NCL-207ENST00000461347 CWC25Q9NXE8 425 aaPredicted RBP16.72■□□□□ 0.27
NCL-207ENST00000461347 AKAP2Q9Y2D5 859 aa16.72■□□□□ 0.27
NCL-207ENST00000461347 TDO2P48775 406 aa16.72■□□□□ 0.27
NCL-207ENST00000461347 NCOA7Q8NI08 942 aa16.72■□□□□ 0.27
NCL-207ENST00000461347 NOL10Q9BSC4 688 aaKnown RBP16.72■□□□□ 0.27
NCL-207ENST00000461347 TTC14Q96N46 770 aa16.72■□□□□ 0.27
NCL-207ENST00000461347 USP6P35125 1406 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms