RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 ZNF853P0CG23 659 aa18.9■□□□□ 0.62
DNMT3A-207ENST00000461228 FKBP1BP68106 108 aa18.9■□□□□ 0.62
DNMT3A-207ENST00000461228 GPSM2P81274 684 aa18.9■□□□□ 0.62
DNMT3A-207ENST00000461228 CALD1Q05682 793 aaKnown RBP18.9■□□□□ 0.62
DNMT3A-207ENST00000461228 GOLGA2Q08379 1002 aa18.9■□□□□ 0.62
DNMT3A-207ENST00000461228 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
DNMT3A-207ENST00000461228 RGMBQ6NW40 437 aa18.9■□□□□ 0.62
DNMT3A-207ENST00000461228 AGBL3Q8NEM8 1001 aa18.9■□□□□ 0.62
DNMT3A-207ENST00000461228 DBNDD1Q9H9R9 158 aa18.9■□□□□ 0.62
DNMT3A-207ENST00000461228 ECM29Q5VYK3 1845 aa18.89■□□□□ 0.61
DNMT3A-207ENST00000461228 ZNF280AP59817 542 aaPredicted RBP18.89■□□□□ 0.61
DNMT3A-207ENST00000461228 RPS8P62241 208 aaKnown RBP18.89■□□□□ 0.61
DNMT3A-207ENST00000461228 KIF4BQ2VIQ3 1234 aa18.89■□□□□ 0.61
DNMT3A-207ENST00000461228 CCDC191Q8NCU4 936 aa18.89■□□□□ 0.61
DNMT3A-207ENST00000461228 DCPSQ96C86 337 aaKnown RBP18.89■□□□□ 0.61
DNMT3A-207ENST00000461228 MCOLN1Q9GZU1 580 aa18.89■□□□□ 0.61
DNMT3A-207ENST00000461228 ZNF408Q9H9D4 720 aa18.89■□□□□ 0.61
DNMT3A-207ENST00000461228 IFT57Q9NWB7 429 aa18.89■□□□□ 0.61
DNMT3A-207ENST00000461228 SHTN1A0MZ66 631 aa18.88■□□□□ 0.61
DNMT3A-207ENST00000461228 PCCAP05165 728 aaPredicted RBP18.88■□□□□ 0.61
DNMT3A-207ENST00000461228 SLC10A3P09131 477 aa18.88■□□□□ 0.61
DNMT3A-207ENST00000461228 DUSP27Q5VZP5 1158 aa18.88■□□□□ 0.61
DNMT3A-207ENST00000461228 C2orf69Q8N8R5 385 aa18.88■□□□□ 0.61
DNMT3A-207ENST00000461228 ZBTB12Q9Y330 459 aaPredicted RBP18.88■□□□□ 0.61
DNMT3A-207ENST00000461228 MED23Q9ULK4 1368 aa18.88■□□□□ 0.61
DNMT3A-207ENST00000461228 A0A1B0GUL6 1792 aa18.88■□□□□ 0.61
DNMT3A-207ENST00000461228 C6orf229H3BNL8 230 aa18.87■□□□□ 0.61
DNMT3A-207ENST00000461228 EGFRP00533 1210 aa18.87■□□□□ 0.61
DNMT3A-207ENST00000461228 XDHP47989 1333 aa18.87■□□□□ 0.61
DNMT3A-207ENST00000461228 MMP14P50281 582 aa18.87■□□□□ 0.61
DNMT3A-207ENST00000461228 CCDC152Q4G0S7 254 aa18.87■□□□□ 0.61
DNMT3A-207ENST00000461228 SAMD7Q7Z3H4 446 aa18.87■□□□□ 0.61
DNMT3A-207ENST00000461228 USP48Q86UV5 1035 aa18.87■□□□□ 0.61
DNMT3A-207ENST00000461228 SULF1Q8IWU6 871 aa18.87■□□□□ 0.61
DNMT3A-207ENST00000461228 MBIPQ9NS73 344 aa18.87■□□□□ 0.61
DNMT3A-207ENST00000461228 GGA3Q9NZ52 723 aa18.87■□□□□ 0.61
DNMT3A-207ENST00000461228 TBC1D10BQ4KMP7 808 aaPredicted RBP18.86■□□□□ 0.61
DNMT3A-207ENST00000461228 ZC3H12CQ9C0D7 883 aaKnown RBP18.86■□□□□ 0.61
DNMT3A-207ENST00000461228 TSKSQ9UJT2 592 aa18.86■□□□□ 0.61
DNMT3A-207ENST00000461228 GGA1Q9UJY5 639 aa18.86■□□□□ 0.61
DNMT3A-207ENST00000461228 COL1A1P02452 1464 aaPredicted RBP18.85■□□□□ 0.61
DNMT3A-207ENST00000461228 CCDC85CA6NKD9 419 aa18.85■□□□□ 0.61
DNMT3A-207ENST00000461228 ATP5J2-PTCD1G3V325 749 aa18.85■□□□□ 0.61
DNMT3A-207ENST00000461228 GNAI1P63096 354 aa18.85■□□□□ 0.61
DNMT3A-207ENST00000461228 CCDC146Q8IYE0 955 aa18.85■□□□□ 0.61
DNMT3A-207ENST00000461228 PDE8AO60658 829 aa18.84■□□□□ 0.61
DNMT3A-207ENST00000461228 UFL1O94874 794 aa18.84■□□□□ 0.61
DNMT3A-207ENST00000461228 RSBN1LQ6PCB5 846 aaPredicted RBP18.84■□□□□ 0.61
DNMT3A-207ENST00000461228 GMLQ99445 158 aa18.84■□□□□ 0.61
DNMT3A-207ENST00000461228 MYO3BQ8WXR4 1341 aa18.83■□□□□ 0.61
DNMT3A-207ENST00000461228 ADM5C9JUS6 153 aa18.83■□□□□ 0.6
DNMT3A-207ENST00000461228 DGKZQ13574 1117 aa18.83■□□□□ 0.6
DNMT3A-207ENST00000461228 NEUROD2Q15784 382 aa18.83■□□□□ 0.6
DNMT3A-207ENST00000461228 RIC3Q7Z5B4 369 aa18.83■□□□□ 0.6
DNMT3A-207ENST00000461228 PODNQ7Z5L7 613 aa18.83■□□□□ 0.6
DNMT3A-207ENST00000461228 CWC25Q9NXE8 425 aaPredicted RBP18.83■□□□□ 0.6
DNMT3A-207ENST00000461228 HTTP42858 3142 aa18.82■□□□□ 0.6
DNMT3A-207ENST00000461228 RIMBP2O15034 1052 aa18.82■□□□□ 0.6
DNMT3A-207ENST00000461228 DDX58O95786 925 aaKnown RBP18.82■□□□□ 0.6
DNMT3A-207ENST00000461228 NOM1Q5C9Z4 860 aaKnown RBP18.82■□□□□ 0.6
DNMT3A-207ENST00000461228 CDCA5Q96FF9 252 aa18.82■□□□□ 0.6
DNMT3A-207ENST00000461228 ANKIB1Q9P2G1 1089 aa18.82■□□□□ 0.6
DNMT3A-207ENST00000461228 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
DNMT3A-207ENST00000461228 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
DNMT3A-207ENST00000461228 ZNF157P51786 506 aaPredicted RBP18.81■□□□□ 0.6
DNMT3A-207ENST00000461228 ZIC5Q96T25 663 aa18.81■□□□□ 0.6
DNMT3A-207ENST00000461228 CDC5LQ99459 802 aaKnown RBP18.81■□□□□ 0.6
DNMT3A-207ENST00000461228 METTL22Q9BUU2 404 aaPredicted RBP18.81■□□□□ 0.6
DNMT3A-207ENST00000461228 ARAP2Q8WZ64 1704 aa18.8■□□□□ 0.6
DNMT3A-207ENST00000461228 ATP2B4P23634 1241 aa18.8■□□□□ 0.6
DNMT3A-207ENST00000461228 RASAL3Q86YV0 1011 aa18.8■□□□□ 0.6
DNMT3A-207ENST00000461228 RBBP6Q7Z6E9 1792 aaKnown RBP18.79■□□□□ 0.6
DNMT3A-207ENST00000461228 USP17L8P0C7I0 530 aa18.79■□□□□ 0.6
DNMT3A-207ENST00000461228 CTSWP56202 376 aa18.79■□□□□ 0.6
DNMT3A-207ENST00000461228 KIF23Q02241 960 aaPredicted RBP18.79■□□□□ 0.6
DNMT3A-207ENST00000461228 DOK7Q18PE1 504 aa18.79■□□□□ 0.6
DNMT3A-207ENST00000461228 ANKRD18AQ8IVF6 992 aa18.79■□□□□ 0.6
DNMT3A-207ENST00000461228 MYOZ2Q9NPC6 264 aa18.79■□□□□ 0.6
DNMT3A-207ENST00000461228 SEC31BQ9NQW1 1179 aa18.79■□□□□ 0.6
DNMT3A-207ENST00000461228 KCNQ5Q9NR82 932 aa18.79■□□□□ 0.6
DNMT3A-207ENST00000461228 USP17L3A6NCW0 530 aa18.78■□□□□ 0.6
DNMT3A-207ENST00000461228 USP17L4A6NCW7 530 aa18.78■□□□□ 0.6
DNMT3A-207ENST00000461228 CCDC30Q5VVM6 783 aa18.78■□□□□ 0.6
DNMT3A-207ENST00000461228 USP17L1Q7RTZ2 530 aa18.78■□□□□ 0.6
DNMT3A-207ENST00000461228 MYD88Q99836 296 aa18.78■□□□□ 0.6
DNMT3A-207ENST00000461228 PHAXQ9H814 394 aaKnown RBP18.78■□□□□ 0.6
DNMT3A-207ENST00000461228 RNF186Q9NXI6 227 aa18.78■□□□□ 0.6
DNMT3A-207ENST00000461228 ANGEL2Q5VTE6 544 aaKnown RBP18.77■□□□□ 0.6
DNMT3A-207ENST00000461228 CFHR5Q9BXR6 569 aa18.77■□□□□ 0.6
DNMT3A-207ENST00000461228 PRKRIP1Q9H875 184 aaPredicted RBP18.77■□□□□ 0.6
DNMT3A-207ENST00000461228 BSDC1Q9NW68 430 aaPredicted RBP18.77■□□□□ 0.6
DNMT3A-207ENST00000461228 PCDH10Q9P2E7 1040 aa18.77■□□□□ 0.6
DNMT3A-207ENST00000461228 G3V3G9 751 aa18.76■□□□□ 0.59
DNMT3A-207ENST00000461228 SCARF1Q14162 830 aa18.76■□□□□ 0.59
DNMT3A-207ENST00000461228 PKN2Q16513 984 aaKnown RBP18.76■□□□□ 0.59
DNMT3A-207ENST00000461228 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
DNMT3A-207ENST00000461228 RTL5Q5HYW3 569 aaPredicted RBP18.76■□□□□ 0.59
DNMT3A-207ENST00000461228 DCAF8Q5TAQ9 597 aa18.76■□□□□ 0.59
DNMT3A-207ENST00000461228 CTU1Q7Z7A3 348 aaKnown RBP18.76■□□□□ 0.59
DNMT3A-207ENST00000461228 CSRNP1Q96S65 589 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms