RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 CELF1Q92879 486 aaKnown RBP20.6■□□□□ 0.89
NELFCD-201ENST00000460601 MPHOSPH8Q99549 860 aa20.6■□□□□ 0.89
NELFCD-201ENST00000460601 RTL9Q8NET4 1388 aa20.6■□□□□ 0.89
NELFCD-201ENST00000460601 SLC51AQ86UW1 340 aa20.6■□□□□ 0.89
NELFCD-201ENST00000460601 FBXO3Q9UK99 471 aa20.6■□□□□ 0.89
NELFCD-201ENST00000460601 TAF5LO75529 589 aa20.59■□□□□ 0.89
NELFCD-201ENST00000460601 MFAP1P55081 439 aaKnown RBP20.59■□□□□ 0.89
NELFCD-201ENST00000460601 BOLA2Q9H3K6 86 aa20.59■□□□□ 0.89
NELFCD-201ENST00000460601 CDC45O75419 566 aa20.59■□□□□ 0.89
NELFCD-201ENST00000460601 ADORA1P30542 326 aa20.59■□□□□ 0.89
NELFCD-201ENST00000460601 GPATCH3Q96I76 525 aa20.59■□□□□ 0.89
NELFCD-201ENST00000460601 STK32BQ9NY57 414 aa20.59■□□□□ 0.89
NELFCD-201ENST00000460601 GLRX3O76003 335 aaKnown RBP20.58■□□□□ 0.89
NELFCD-201ENST00000460601 FLAD1Q8NFF5 587 aa20.58■□□□□ 0.89
NELFCD-201ENST00000460601 ERC2O15083 957 aa20.57■□□□□ 0.88
NELFCD-201ENST00000460601 IGHMBP2P38935 993 aaKnown RBP20.57■□□□□ 0.88
NELFCD-201ENST00000460601 NLGN1Q8N2Q7 840 aa20.57■□□□□ 0.88
NELFCD-201ENST00000460601 MMP10P09238 476 aa20.57■□□□□ 0.88
NELFCD-201ENST00000460601 EDC3Q96F86 508 aaKnown RBP20.57■□□□□ 0.88
NELFCD-201ENST00000460601 GPR108Q9NPR9 543 aa20.57■□□□□ 0.88
NELFCD-201ENST00000460601 WTIPA6NIX2 430 aaPredicted RBP20.56■□□□□ 0.88
NELFCD-201ENST00000460601 PDE8BO95263 885 aa20.56■□□□□ 0.88
NELFCD-201ENST00000460601 CDC5LQ99459 802 aaKnown RBP20.56■□□□□ 0.88
NELFCD-201ENST00000460601 ANKRD18AQ8IVF6 992 aa20.56■□□□□ 0.88
NELFCD-201ENST00000460601 XAGE2Q96GT9 111 aa20.56■□□□□ 0.88
NELFCD-201ENST00000460601 ST5P78524 1137 aa20.55■□□□□ 0.88
NELFCD-201ENST00000460601 ATP2B3Q16720 1220 aa20.55■□□□□ 0.88
NELFCD-201ENST00000460601 CHRNDQ07001 517 aa20.54■□□□□ 0.88
NELFCD-201ENST00000460601 ANP32EQ9BTT0 268 aa20.54■□□□□ 0.88
NELFCD-201ENST00000460601 AKAP2Q9Y2D5 859 aa20.54■□□□□ 0.88
NELFCD-201ENST00000460601 MROH5Q6ZUA9 1318 aa20.54■□□□□ 0.88
NELFCD-201ENST00000460601 ATP5JP18859 108 aa20.53■□□□□ 0.88
NELFCD-201ENST00000460601 DNAJC2Q99543 621 aaKnown RBP20.53■□□□□ 0.88
NELFCD-201ENST00000460601 IL25Q9H293 177 aa20.53■□□□□ 0.88
NELFCD-201ENST00000460601 AK9Q5TCS8 1911 aa20.52■□□□□ 0.88
NELFCD-201ENST00000460601 RPS8P62241 208 aaKnown RBP20.52■□□□□ 0.88
NELFCD-201ENST00000460601 DDX46Q7L014 1031 aaKnown RBP20.52■□□□□ 0.88
NELFCD-201ENST00000460601 CNTROBQ8N137 903 aa20.52■□□□□ 0.88
NELFCD-201ENST00000460601 BSDC1Q9NW68 430 aaPredicted RBP20.52■□□□□ 0.88
NELFCD-201ENST00000460601 CHMLP26374 656 aa20.51■□□□□ 0.87
NELFCD-201ENST00000460601 PUM3Q15397 648 aaKnown RBP20.51■□□□□ 0.87
NELFCD-201ENST00000460601 CRY2Q49AN0 593 aa20.51■□□□□ 0.87
NELFCD-201ENST00000460601 MINPP1Q9UNW1 487 aa20.51■□□□□ 0.87
NELFCD-201ENST00000460601 FGFR2P21802 821 aa20.5■□□□□ 0.87
NELFCD-201ENST00000460601 SCARF1Q14162 830 aa20.5■□□□□ 0.87
NELFCD-201ENST00000460601 GORABQ5T7V8 394 aa20.5■□□□□ 0.87
NELFCD-201ENST00000460601 PI16Q6UXB8 463 aa20.5■□□□□ 0.87
NELFCD-201ENST00000460601 PARP3Q9Y6F1 533 aa20.5■□□□□ 0.87
NELFCD-201ENST00000460601 ANKRD31Q8N7Z5 1873 aa20.5■□□□□ 0.87
NELFCD-201ENST00000460601 CHGBP05060 677 aa20.5■□□□□ 0.87
NELFCD-201ENST00000460601 NRXN2Q9P2S2 1712 aa20.49■□□□□ 0.87
NELFCD-201ENST00000460601 RPGRQ92834 1020 aaKnown RBP20.49■□□□□ 0.87
NELFCD-201ENST00000460601 LPIN2Q92539 896 aa20.48■□□□□ 0.87
NELFCD-201ENST00000460601 SNRKQ9NRH2 765 aa20.48■□□□□ 0.87
NELFCD-201ENST00000460601 SRCAPQ6ZRS2 3230 aa20.48■□□□□ 0.87
NELFCD-201ENST00000460601 A0A1B0GUL6 1792 aa20.48■□□□□ 0.87
NELFCD-201ENST00000460601 QSER1Q2KHR3 1735 aa20.48■□□□□ 0.87
NELFCD-201ENST00000460601 TTC39AQ5SRH9 613 aa20.48■□□□□ 0.87
NELFCD-201ENST00000460601 CASC1Q6TDU7 716 aa20.48■□□□□ 0.87
NELFCD-201ENST00000460601 CCDC125Q86Z20 511 aa20.48■□□□□ 0.87
NELFCD-201ENST00000460601 EVI5LQ96CN4 794 aa20.48■□□□□ 0.87
NELFCD-201ENST00000460601 HAUS7Q99871 368 aa20.48■□□□□ 0.87
NELFCD-201ENST00000460601 IFIT1P09914 478 aaKnown RBP20.47■□□□□ 0.87
NELFCD-201ENST00000460601 PHKA1P46020 1223 aa20.47■□□□□ 0.87
NELFCD-201ENST00000460601 GRAPQ13588 217 aa20.47■□□□□ 0.87
NELFCD-201ENST00000460601 CCDC158Q5M9N0 1113 aa20.47■□□□□ 0.87
NELFCD-201ENST00000460601 GRAPLQ8TC17 118 aaPredicted RBP20.47■□□□□ 0.87
NELFCD-201ENST00000460601 ANTXR1Q9H6X2 564 aa20.47■□□□□ 0.87
NELFCD-201ENST00000460601 UPF2Q9HAU5 1272 aaKnown RBP20.47■□□□□ 0.87
NELFCD-201ENST00000460601 UTRNP46939 3433 aa20.47■□□□□ 0.87
NELFCD-201ENST00000460601 GOLIM4O00461 696 aa20.47■□□□□ 0.87
NELFCD-201ENST00000460601 CWC27Q6UX04 472 aaKnown RBP20.47■□□□□ 0.87
NELFCD-201ENST00000460601 TBC1D32Q96NH3 1257 aa20.47■□□□□ 0.87
NELFCD-201ENST00000460601 FKBP4Q02790 459 aaKnown RBP eCLIP20.46■□□□□ 0.87
NELFCD-201ENST00000460601 CCDC102BQ68D86 513 aa20.46■□□□□ 0.87
NELFCD-201ENST00000460601 FSD1Q9BTV5 496 aa20.46■□□□□ 0.87
NELFCD-201ENST00000460601 KLRK1P26718 216 aa20.45■□□□□ 0.86
NELFCD-201ENST00000460601 MCAMP43121 646 aa20.45■□□□□ 0.86
NELFCD-201ENST00000460601 ESYT1Q9BSJ8 1104 aa20.45■□□□□ 0.86
NELFCD-201ENST00000460601 C22orf23Q9BZE7 217 aa20.45■□□□□ 0.86
NELFCD-201ENST00000460601 KLRG2A4D1S0 409 aaPredicted RBP20.45■□□□□ 0.86
NELFCD-201ENST00000460601 SLC5A1P13866 664 aa20.45■□□□□ 0.86
NELFCD-201ENST00000460601 SLFNL1Q499Z3 407 aa20.45■□□□□ 0.86
NELFCD-201ENST00000460601 UPF1Q92900 1129 aaKnown RBP eCLIP20.45■□□□□ 0.861e-6■□□□□ 9.8
NELFCD-201ENST00000460601 BRIP1Q9BX63 1249 aa20.45■□□□□ 0.86
NELFCD-201ENST00000460601 ARAP2Q8WZ64 1704 aa20.44■□□□□ 0.86
NELFCD-201ENST00000460601 BCAMP50895 628 aa20.44■□□□□ 0.86
NELFCD-201ENST00000460601 PAG1Q9NWQ8 432 aa20.44■□□□□ 0.86
NELFCD-201ENST00000460601 FAM227BQ96M60 508 aa20.44■□□□□ 0.86
NELFCD-201ENST00000460601 COL11A2P13942 1736 aaPredicted RBP20.43■□□□□ 0.86
NELFCD-201ENST00000460601 ZAP70P43403 619 aa20.43■□□□□ 0.86
NELFCD-201ENST00000460601 SRGNP10124 158 aa20.42■□□□□ 0.86
NELFCD-201ENST00000460601 ANP32AP39687 249 aaKnown RBP20.42■□□□□ 0.86
NELFCD-201ENST00000460601 GYG1P46976 350 aa20.42■□□□□ 0.86
NELFCD-201ENST00000460601 RBM17Q96I25 401 aaKnown RBP20.42■□□□□ 0.86
NELFCD-201ENST00000460601 DIAPH3Q9NSV4 1193 aa20.42■□□□□ 0.86
NELFCD-201ENST00000460601 IQSEC3Q9UPP2 1182 aaPredicted RBP20.42■□□□□ 0.86
NELFCD-201ENST00000460601 AKAP11Q9UKA4 1901 aa20.41■□□□□ 0.86
NELFCD-201ENST00000460601 A0A0D9SFI3 127 aa20.41■□□□□ 0.86
NELFCD-201ENST00000460601 HOXA10P31260 410 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms