RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 PLA2G12BQ9BX93 195 aa9.49□□□□□ -0.89
ABCA4-202ENST00000460514 IRX2Q9BZI1 471 aaPredicted RBP9.49□□□□□ -0.89
ABCA4-202ENST00000460514 ZBTB40Q9NUA8 1239 aa9.49□□□□□ -0.89
ABCA4-202ENST00000460514 RIC1Q4ADV7 1423 aa9.48□□□□□ -0.89
ABCA4-202ENST00000460514 PDE6BP35913 854 aa9.48□□□□□ -0.89
ABCA4-202ENST00000460514 CASP7P55210 303 aa9.48□□□□□ -0.89
ABCA4-202ENST00000460514 IRX6P78412 446 aaPredicted RBP9.48□□□□□ -0.89
ABCA4-202ENST00000460514 ERFEQ4G0M1 354 aa9.48□□□□□ -0.89
ABCA4-202ENST00000460514 RTL5Q5HYW3 569 aaPredicted RBP9.48□□□□□ -0.89
ABCA4-202ENST00000460514 NUTM1Q86Y26 1132 aa9.48□□□□□ -0.89
ABCA4-202ENST00000460514 BRIP1Q9BX63 1249 aa9.48□□□□□ -0.89
ABCA4-202ENST00000460514 PCDHB8Q9UN66 801 aa9.48□□□□□ -0.89
ABCA4-202ENST00000460514 NRXN2Q9P2S2 1712 aa9.48□□□□□ -0.89
ABCA4-202ENST00000460514 G3V3G9 751 aa9.47□□□□□ -0.89
ABCA4-202ENST00000460514 HMMRO75330 724 aa9.47□□□□□ -0.89
ABCA4-202ENST00000460514 CTSWP56202 376 aa9.47□□□□□ -0.89
ABCA4-202ENST00000460514 CCDC152Q4G0S7 254 aa9.47□□□□□ -0.89
ABCA4-202ENST00000460514 ZNF467Q7Z7K2 595 aaPredicted RBP9.47□□□□□ -0.89
ABCA4-202ENST00000460514 RPAP2Q8IXW5 612 aaPredicted RBP9.47□□□□□ -0.89
ABCA4-202ENST00000460514 EXOC6Q8TAG9 804 aa9.47□□□□□ -0.89
ABCA4-202ENST00000460514 SUCLG2Q96I99 432 aa9.47□□□□□ -0.89
ABCA4-202ENST00000460514 LRRFIP2Q9Y608 721 aaKnown RBP9.47□□□□□ -0.89
ABCA4-202ENST00000460514 LAMB2P55268 1798 aa9.47□□□□□ -0.89
ABCA4-202ENST00000460514 HCLS1P14317 486 aaPredicted RBP9.46□□□□□ -0.9
ABCA4-202ENST00000460514 JARID2Q92833 1246 aaPredicted RBP9.46□□□□□ -0.9
ABCA4-202ENST00000460514 BICC1Q9H694 974 aaKnown RBP9.46□□□□□ -0.9
ABCA4-202ENST00000460514 CHMP3Q9Y3E7 222 aa9.46□□□□□ -0.9
ABCA4-202ENST00000460514 MYH3P11055 1940 aa9.46□□□□□ -0.9
ABCA4-202ENST00000460514 ABCC12Q96J65 1359 aa9.46□□□□□ -0.9
ABCA4-202ENST00000460514 CSF1RP07333 972 aa9.45□□□□□ -0.9
ABCA4-202ENST00000460514 IFIT5Q13325 482 aaKnown RBP9.45□□□□□ -0.9
ABCA4-202ENST00000460514 MTX1Q13505 466 aa9.45□□□□□ -0.9
ABCA4-202ENST00000460514 SF3B3Q15393 1217 aaKnown RBP9.45□□□□□ -0.9
ABCA4-202ENST00000460514 CCDC57Q2TAC2 916 aa9.45□□□□□ -0.9
ABCA4-202ENST00000460514 RABL6Q3YEC7 729 aaPredicted RBP9.45□□□□□ -0.9
ABCA4-202ENST00000460514 TAF7LQ5H9L4 462 aa9.45□□□□□ -0.9
ABCA4-202ENST00000460514 LMBR1LQ6UX01 489 aa9.45□□□□□ -0.9
ABCA4-202ENST00000460514 DDX46Q7L014 1031 aaKnown RBP9.45□□□□□ -0.9
ABCA4-202ENST00000460514 SYNE4Q8N205 404 aa9.45□□□□□ -0.9
ABCA4-202ENST00000460514 RPGRQ92834 1020 aaKnown RBP9.45□□□□□ -0.9
ABCA4-202ENST00000460514 CDC5LQ99459 802 aaKnown RBP9.45□□□□□ -0.9
ABCA4-202ENST00000460514 PPP1R1BQ9UD71 204 aaPredicted RBP9.45□□□□□ -0.9
ABCA4-202ENST00000460514 RTL9Q8NET4 1388 aa9.45□□□□□ -0.9
ABCA4-202ENST00000460514 C10orf71Q711Q0 1435 aa9.45□□□□□ -0.9
ABCA4-202ENST00000460514 ANKRD18BA2A2Z9 1011 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 H0YIN7 160 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 SRGAP3O43295 1099 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 NPR1P16066 1061 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 TGFB2P61812 414 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 FOXO4P98177 505 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 ATP8B2P98198 1209 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 CEP85Q6P2H3 762 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 ANKRD44Q8N8A2 993 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 TTLL11Q8NHH1 800 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 RBM17Q96I25 401 aaKnown RBP9.44□□□□□ -0.9
ABCA4-202ENST00000460514 C1orf115Q9H7X2 142 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 CD2APQ9Y5K6 639 aa9.44□□□□□ -0.9
ABCA4-202ENST00000460514 DDX60Q8IY21 1712 aaKnown RBP9.44□□□□□ -0.9
ABCA4-202ENST00000460514 KLRG2A4D1S0 409 aaPredicted RBP9.43□□□□□ -0.9
ABCA4-202ENST00000460514 ALDH1B1P30837 517 aa9.43□□□□□ -0.9
ABCA4-202ENST00000460514 IGHMBP2P38935 993 aaKnown RBP9.43□□□□□ -0.9
ABCA4-202ENST00000460514 CRY2Q49AN0 593 aa9.43□□□□□ -0.9
ABCA4-202ENST00000460514 EPHA10Q5JZY3 1008 aa9.43□□□□□ -0.9
ABCA4-202ENST00000460514 C2CD5Q86YS7 1000 aa9.43□□□□□ -0.9
ABCA4-202ENST00000460514 CCDC24Q8N4L8 307 aa9.43□□□□□ -0.9
ABCA4-202ENST00000460514 MASTLQ96GX5 879 aa9.43□□□□□ -0.9
ABCA4-202ENST00000460514 KAZALD1Q96I82 304 aa9.43□□□□□ -0.9
ABCA4-202ENST00000460514 TMX4Q9H1E5 349 aaPredicted RBP9.43□□□□□ -0.9
ABCA4-202ENST00000460514 RWDD1Q9H446 243 aaPredicted RBP9.43□□□□□ -0.9
ABCA4-202ENST00000460514 SRGNP10124 158 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 ITGA6P23229 1130 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 HOXA10P31260 410 aaPredicted RBP9.42□□□□□ -0.9
ABCA4-202ENST00000460514 LSM11P83369 360 aaKnown RBP eCLIP9.42□□□□□ -0.9
ABCA4-202ENST00000460514 FAM161AQ3B820 660 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 HSP90AB4PQ58FF6 505 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 STYK1Q6J9G0 422 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 TMC4Q7Z404 712 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 ANKRD18AQ8IVF6 992 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 SSH3Q8TE77 659 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 CNKSR1Q969H4 720 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 CRAMP1Q96RY5 1269 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 MPHOSPH8Q99549 860 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 GREM2Q9H772 168 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 ZSWIM6Q9HCJ5 1215 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 BOLA1Q9Y3E2 137 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 KIF13BQ9NQT8 1826 aa9.42□□□□□ -0.9
ABCA4-202ENST00000460514 ANKRD31Q8N7Z5 1873 aa9.41□□□□□ -0.9
ABCA4-202ENST00000460514 RIOK3O14730 519 aaKnown RBP9.41□□□□□ -0.9
ABCA4-202ENST00000460514 BBOX1O75936 387 aa9.41□□□□□ -0.9
ABCA4-202ENST00000460514 HDAC1Q13547 482 aaPredicted RBP9.41□□□□□ -0.9
ABCA4-202ENST00000460514 GRAPQ13588 217 aa9.41□□□□□ -0.9
ABCA4-202ENST00000460514 GRAPLQ8TC17 118 aaPredicted RBP9.41□□□□□ -0.9
ABCA4-202ENST00000460514 ZNF622Q969S3 477 aaKnown RBP eCLIP9.41□□□□□ -0.9
ABCA4-202ENST00000460514 RNF25Q96BH1 459 aaPredicted RBP9.41□□□□□ -0.9
ABCA4-202ENST00000460514 CCDC85AQ96PX6 553 aaPredicted RBP9.41□□□□□ -0.9
ABCA4-202ENST00000460514 RTN4Q9NQC3 1192 aaKnown RBP9.41□□□□□ -0.9
ABCA4-202ENST00000460514 PPP4R2Q9NY27 417 aa9.41□□□□□ -0.9
ABCA4-202ENST00000460514 PCDHB15Q9Y5E8 787 aa9.41□□□□□ -0.9
ABCA4-202ENST00000460514 TNRC6CQ9HCJ0 1690 aaKnown RBP9.41□□□□□ -0.9
ABCA4-202ENST00000460514 PNMA6EA0A0J9YXQ4 647 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms