RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TBC1D9BQ66K14 1250 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 MCM10Q7L590 875 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 GAS2L2Q8NHY3 880 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 POM121Q96HA1 1249 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 RRAGCQ9HB90 399 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 SNRKQ9NRH2 765 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 MIS18AQ9NYP9 233 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 COL15A1P39059 1388 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 SIPA1L3O60292 1781 aaPredicted RBP6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 UBR2Q8IWV8 1755 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 GOLGA8CPA6NN73 597 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 HSPA6P17066 643 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 PRELPP51888 382 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 USP46P62068 366 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 RASSF7Q02833 373 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 C2CD5Q86YS7 1000 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 TSC1Q92574 1164 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 CFAP53Q96M91 514 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 RNF181Q9P0P0 153 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 NUDCQ9Y266 331 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 NPC1L1Q9UHC9 1359 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 HEG1Q9ULI3 1381 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 MRC1P22897 1456 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 CACNA1SQ13698 1873 aa6.26□□□□□ -1.41
GTF3C3-208ENST00000455546 DLG5Q8TDM6 1919 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 A0A087WZG4 1122 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 H0YIN7 160 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 LILRB3O75022 631 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 AP1G2O75843 785 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 TOMM70O94826 608 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 HTRA3P83110 453 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 PPP2R2DQ66LE6 453 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 ANKK1Q8NFD2 765 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 RTF1Q92541 710 aaKnown RBP6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 SYMPKQ92797 1274 aaKnown RBP6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 ZNF622Q969S3 477 aaKnown RBP eCLIP6.25□□□□□ -1.413e-7■■■□□ 15.3
GTF3C3-208ENST00000455546 FMNL2Q96PY5 1086 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 TEX13AQ9BXU3 409 aaPredicted RBP6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 HPS5Q9UPZ3 1129 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 CARMIL3Q8ND23 1372 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 ANKRD31Q8N7Z5 1873 aa6.25□□□□□ -1.41
GTF3C3-208ENST00000455546 CEMIPQ8WUJ3 1361 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 FAM177BA6PVY3 158 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 IL6STP40189 918 aaPredicted RBP6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 KMT5BQ4FZB7 885 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 PRR5LQ6MZQ0 368 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 DZIP3Q86Y13 1208 aaKnown RBP6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 NGEFQ8N5V2 710 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 TTLL6Q8N841 843 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 SETDB2Q96T68 719 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 KRTAP3-3Q9BYR6 98 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 KRTAP3-2Q9BYR7 98 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 ZBTB3Q9H5J0 574 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 SLX4Q8IY92 1834 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 NRXN2Q9P2S2 1712 aa6.24□□□□□ -1.41
GTF3C3-208ENST00000455546 C6orf229H3BNL8 230 aa6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 NPHP1O15259 732 aa6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 C21orf2O43822 256 aa6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 CAMTA2O94983 1202 aa6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 SNRPA1P09661 255 aaKnown RBP6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 TAF7Q15545 349 aaPredicted RBP6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 TUSC1Q2TAM9 212 aa6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 NBPF10Q6P3W6 841 aaKnown RBP6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 NPM2Q86SE8 214 aaKnown RBP6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 C16orf71Q8IYS4 520 aaPredicted RBP6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 NBPF15Q8N660 670 aa6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 DNAJC5GQ8N7S2 189 aa6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 WNT2BQ93097 391 aa6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 ARID3AQ99856 593 aa6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 THUMPD2Q9BTF0 503 aaKnown RBP6.23□□□□□ -1.41
GTF3C3-208ENST00000455546 DLEC1Q9Y238 1755 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 SPDYE5A6NIY4 337 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 NFKBIEO00221 500 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 USP17L8P0C7I0 530 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 LMNB1P20700 586 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 PDE6BP35913 854 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 APLP1P51693 650 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 MTMR2Q13614 643 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 HLFQ16534 295 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 MTMR14Q8NCE2 650 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 BRIP1Q9BX63 1249 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 KDM2BQ8NHM5 1336 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 FER1L6Q2WGJ9 1857 aa6.22□□□□□ -1.41
GTF3C3-208ENST00000455546 DICER1Q9UPY3 1922 aaKnown RBP6.21□□□□□ -1.41
GTF3C3-208ENST00000455546 NUP98P52948 1817 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 SOWAHBA6NEL2 793 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 CFAP99D6REC4 459 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 ACTN4O43707 911 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 HTATSF1O43719 755 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 GJA5P36382 358 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 PPP4CP60510 307 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 GRIPAP1Q4V328 841 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 TMEM259Q4ZIN3 620 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 PRPF38BQ5VTL8 546 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 OLFM4Q6UX06 510 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 NBPF5PQ86XG9 351 aaPredicted RBP6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 CNBD1Q8NA66 436 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 PLEKHF1Q96S99 279 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 C1orf115Q9H7X2 142 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms