RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 UBTFL1P0CB47 393 aaPredicted RBP8.65□□□□□ -1.02
NCL-206ENST00000454824 BRPF1P55201 1214 aaPredicted RBP8.65□□□□□ -1.02
NCL-206ENST00000454824 LMBR1LQ6UX01 489 aa8.65□□□□□ -1.02
NCL-206ENST00000454824 ATF7IPQ6VMQ6 1270 aa8.65□□□□□ -1.02
NCL-206ENST00000454824 CHRDL2Q6WN34 429 aa8.65□□□□□ -1.02
NCL-206ENST00000454824 LARGE2Q8N3Y3 721 aa8.65□□□□□ -1.02
NCL-206ENST00000454824 BBXQ8WY36 941 aaPredicted RBP8.65□□□□□ -1.02
NCL-206ENST00000454824 CELF1Q92879 486 aaKnown RBP8.65□□□□□ -1.02
NCL-206ENST00000454824 GREM2Q9H772 168 aa8.65□□□□□ -1.02
NCL-206ENST00000454824 KDM2BQ8NHM5 1336 aa8.64□□□□□ -1.03
NCL-206ENST00000454824 PPIP5K2O43314 1243 aa8.64□□□□□ -1.03
NCL-206ENST00000454824 MS4A1P11836 297 aa8.64□□□□□ -1.03
NCL-206ENST00000454824 ITGA6P23229 1130 aa8.64□□□□□ -1.03
NCL-206ENST00000454824 ZNF784Q8NCA9 323 aaPredicted RBP8.64□□□□□ -1.03
NCL-206ENST00000454824 PSMD1Q99460 953 aa8.64□□□□□ -1.03
NCL-206ENST00000454824 EYA3Q99504 573 aa8.64□□□□□ -1.03
NCL-206ENST00000454824 PLA2G12BQ9BX93 195 aa8.64□□□□□ -1.03
NCL-206ENST00000454824 RCAN3Q9UKA8 241 aa8.64□□□□□ -1.03
NCL-206ENST00000454824 TNRC6CQ9HCJ0 1690 aaKnown RBP8.64□□□□□ -1.03
NCL-206ENST00000454824 CCDC88AQ3V6T2 1871 aa8.64□□□□□ -1.03
NCL-206ENST00000454824 LTBP3Q9NS15 1303 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 RIMBP2O15034 1052 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 GNAI3P08754 354 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 NBPF7P0C2Y1 421 aaPredicted RBP8.63□□□□□ -1.03
NCL-206ENST00000454824 CHRM1P11229 460 aaPredicted RBP8.63□□□□□ -1.03
NCL-206ENST00000454824 IARSP41252 1262 aaKnown RBP8.63□□□□□ -1.03
NCL-206ENST00000454824 KCNJ4P48050 445 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 EIF6P56537 245 aaKnown RBP8.63□□□□□ -1.03
NCL-206ENST00000454824 WASHC4Q2M389 1173 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
NCL-206ENST00000454824 DZIP1LQ8IYY4 767 aaKnown RBP8.63□□□□□ -1.03
NCL-206ENST00000454824 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.63□□□□□ -1.03
NCL-206ENST00000454824 SUCLG2Q96I99 432 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 ZC3H12CQ9C0D7 883 aaKnown RBP8.63□□□□□ -1.03
NCL-206ENST00000454824 USP44Q9H0E7 712 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 CNNM1Q9NRU3 951 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 GGA1Q9UJY5 639 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 TAF1P21675 1872 aa8.63□□□□□ -1.03
NCL-206ENST00000454824 DDX60Q8IY21 1712 aaKnown RBP8.63□□□□□ -1.03
NCL-206ENST00000454824 PLIN1O60240 522 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 UFL1O94874 794 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 CSF1RP07333 972 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 TRIM27P14373 513 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 CASP7P55210 303 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 GPSM2P81274 684 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 FOXO4P98177 505 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 AOC3Q16853 763 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 LDHAL6AQ6ZMR3 332 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 ITPRIPQ8IWB1 547 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 ANKRD2Q9GZV1 360 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 VPS33BQ9H267 617 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 BICC1Q9H694 974 aaKnown RBP8.62□□□□□ -1.03
NCL-206ENST00000454824 BSDC1Q9NW68 430 aaPredicted RBP8.62□□□□□ -1.03
NCL-206ENST00000454824 LAMB2P55268 1798 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 MYH3P11055 1940 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 SBF1O95248 1867 aa8.62□□□□□ -1.03
NCL-206ENST00000454824 ATP2B4P23634 1241 aa8.61□□□□□ -1.03
NCL-206ENST00000454824 EPHA10Q5JZY3 1008 aa8.61□□□□□ -1.03
NCL-206ENST00000454824 INTS3Q68E01 1043 aaKnown RBP8.61□□□□□ -1.03
NCL-206ENST00000454824 PIP4P2Q8N4L2 257 aa8.61□□□□□ -1.03
NCL-206ENST00000454824 RRAGCQ9HB90 399 aa8.61□□□□□ -1.03
NCL-206ENST00000454824 MINPP1Q9UNW1 487 aa8.61□□□□□ -1.03
NCL-206ENST00000454824 GJA3Q9Y6H8 435 aa8.61□□□□□ -1.03
NCL-206ENST00000454824 FER1L6Q2WGJ9 1857 aa8.61□□□□□ -1.03
NCL-206ENST00000454824 UTRNP46939 3433 aa8.61□□□□□ -1.03
NCL-206ENST00000454824 UTYO14607 1347 aa8.6□□□□□ -1.03
NCL-206ENST00000454824 XDHP47989 1333 aa8.6□□□□□ -1.03
NCL-206ENST00000454824 ZC3H4Q9UPT8 1303 aaKnown RBP8.6□□□□□ -1.03
NCL-206ENST00000454824 GLTPD2A6NH11 291 aa8.6□□□□□ -1.03
NCL-206ENST00000454824 PYGBP11216 843 aa8.6□□□□□ -1.03
NCL-206ENST00000454824 TNIP1Q15025 636 aa8.6□□□□□ -1.03
NCL-206ENST00000454824 TMEM57Q8N5G2 664 aa8.6□□□□□ -1.03
NCL-206ENST00000454824 TBC1D16Q8TBP0 767 aa8.6□□□□□ -1.03
NCL-206ENST00000454824 ZNF594Q96JF6 807 aaPredicted RBP8.6□□□□□ -1.03
NCL-206ENST00000454824 ZNRF3Q9ULT6 936 aa8.6□□□□□ -1.03
NCL-206ENST00000454824 LRRFIP2Q9Y608 721 aaKnown RBP8.6□□□□□ -1.03
NCL-206ENST00000454824 RTL9Q8NET4 1388 aa8.6□□□□□ -1.03
NCL-206ENST00000454824 RIOK3O14730 519 aaKnown RBP8.59□□□□□ -1.03
NCL-206ENST00000454824 DDNO94850 711 aaPredicted RBP8.59□□□□□ -1.03
NCL-206ENST00000454824 GNAI2P04899 355 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 VEGFAP15692 232 aaPredicted RBP8.59□□□□□ -1.03
NCL-206ENST00000454824 LMOD1P29536 600 aaPredicted RBP8.59□□□□□ -1.03
NCL-206ENST00000454824 PRELPP51888 382 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 KIAA2012Q0VF49 1180 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 DOK7Q18PE1 504 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 SLC51AQ86UW1 340 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
NCL-206ENST00000454824 FBXW7Q969H0 707 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 MEIS3Q99687 375 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 RTFDC1Q9BY42 306 aaPredicted RBP8.59□□□□□ -1.03
NCL-206ENST00000454824 TSPYL2Q9H2G4 693 aaPredicted RBP8.59□□□□□ -1.03
NCL-206ENST00000454824 CHMP4BQ9H444 224 aaKnown RBP8.59□□□□□ -1.03
NCL-206ENST00000454824 PODXL2Q9NZ53 605 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
NCL-206ENST00000454824 POLLQ9UGP5 575 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 TNNQ9UQP3 1299 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 LEMD3Q9Y2U8 911 aa8.59□□□□□ -1.03
NCL-206ENST00000454824 IQCA1LA6NCM1 817 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms