RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SSC5DA1L4H1 1573 aa6.25□□□□□ -1.41
RIF1-207ENST00000454583 PDE8AO60658 829 aa6.25□□□□□ -1.41
RIF1-207ENST00000454583 NECTIN2Q92692 538 aa6.25□□□□□ -1.41
RIF1-207ENST00000454583 POLR2AP24928 1970 aaKnown RBP6.25□□□□□ -1.41
RIF1-207ENST00000454583 PLEKHG5O94827 1062 aa6.25□□□□□ -1.41
RIF1-207ENST00000454583 GNAI2P04899 355 aa6.25□□□□□ -1.41
RIF1-207ENST00000454583 EIF2S2P20042 333 aaKnown RBP6.25□□□□□ -1.41
RIF1-207ENST00000454583 IFNLR1Q8IU57 520 aaPredicted RBP6.25□□□□□ -1.41
RIF1-207ENST00000454583 EAF2Q96CJ1 260 aaPredicted RBP6.25□□□□□ -1.41
RIF1-207ENST00000454583 ZBED3Q96IU2 234 aaPredicted RBP6.25□□□□□ -1.41
RIF1-207ENST00000454583 CRAMP1Q96RY5 1269 aa6.25□□□□□ -1.41
RIF1-207ENST00000454583 PUS3Q9BZE2 481 aaKnown RBP6.25□□□□□ -1.41
RIF1-207ENST00000454583 TBC1D2BQ9UPU7 963 aa6.25□□□□□ -1.41
RIF1-207ENST00000454583 GNPATO15228 680 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 APBA3O96018 575 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 FKBP5Q13451 457 aaPredicted RBP6.24□□□□□ -1.41
RIF1-207ENST00000454583 LRRC24Q50LG9 513 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 HSP90AB3PQ58FF7 597 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 SLC16A10Q8TF71 515 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 MKRN1Q9UHC7 482 aaKnown RBP6.24□□□□□ -1.41
RIF1-207ENST00000454583 GNAI3P08754 354 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 ZBTB3Q9H5J0 574 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 BSDC1Q9NW68 430 aaPredicted RBP6.24□□□□□ -1.41
RIF1-207ENST00000454583 DBNLQ9UJU6 430 aaKnown RBP6.24□□□□□ -1.41
RIF1-207ENST00000454583 MYH6P13533 1939 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 ATP5J2-PTCD1G3V325 749 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 NEFLP07196 543 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 C16orf71Q8IYS4 520 aaPredicted RBP6.24□□□□□ -1.41
RIF1-207ENST00000454583 ZBTB47Q9UFB7 747 aaPredicted RBP6.24□□□□□ -1.41
RIF1-207ENST00000454583 PDZRN3Q9UPQ7 1066 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 TACC3Q9Y6A5 838 aa6.24□□□□□ -1.41
RIF1-207ENST00000454583 IL1R1P14778 569 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 STYK1Q6J9G0 422 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 FBXO33Q7Z6M2 555 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 FAM89AQ96GI7 184 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 RTN4Q9NQC3 1192 aaKnown RBP6.23□□□□□ -1.41
RIF1-207ENST00000454583 FAM161AQ3B820 660 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 CHD1LQ86WJ1 897 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 FLAD1Q8NFF5 587 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 NKX2-3Q8TAU0 364 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 KLHDC4Q8TBB5 520 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 CELF1Q92879 486 aaKnown RBP6.23□□□□□ -1.41
RIF1-207ENST00000454583 STK31Q9BXU1 1019 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 RTCBQ9Y3I0 505 aaKnown RBP6.23□□□□□ -1.41
RIF1-207ENST00000454583 NID2Q14112 1375 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 RAB11FIP3O75154 756 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 KLRK1P26718 216 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 BRIP1Q9BX63 1249 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 SEC31BQ9NQW1 1179 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 SH3TC1Q8TE82 1336 aa6.23□□□□□ -1.41
RIF1-207ENST00000454583 FRMPD3Q5JV73 1810 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 SEC24BO95487 1268 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 NEFMP07197 916 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 CANXP27824 592 aaKnown RBP6.22□□□□□ -1.41
RIF1-207ENST00000454583 TRAPPC3LQ5T215 181 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 ANTXR1Q9H6X2 564 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 ZNF236Q9UL36 1845 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 ROBO3Q96MS0 1386 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 NOVP48745 357 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 COL9A3Q14050 684 aaPredicted RBP6.22□□□□□ -1.41
RIF1-207ENST00000454583 UTP14AQ9BVJ6 771 aaKnown RBP6.22□□□□□ -1.41
RIF1-207ENST00000454583 NBPF3Q9H094 633 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 MINPP1Q9UNW1 487 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 PA2G4Q9UQ80 394 aaKnown RBP6.22□□□□□ -1.41
RIF1-207ENST00000454583 ZMYM6O95789 1325 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 TTC41PQ6P2S7 1318 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 EYA2O00167 538 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 SCARF1Q14162 830 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 TNNI3KQ59H18 835 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 BMP2KLQ5H9B9 411 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 TTC22Q5TAA0 569 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 UBE3BQ7Z3V4 1068 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 RHPN1Q8TCX5 695 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 FPGT-TNNI3KV9GXZ4 949 aa6.22□□□□□ -1.41
RIF1-207ENST00000454583 IRS4O14654 1257 aaPredicted RBP6.21□□□□□ -1.41
RIF1-207ENST00000454583 DDX58O95786 925 aaKnown RBP6.21□□□□□ -1.41
RIF1-207ENST00000454583 ITPRIPQ8IWB1 547 aa6.21□□□□□ -1.41
RIF1-207ENST00000454583 SPDYE1Q8NFV5 336 aaPredicted RBP6.21□□□□□ -1.41
RIF1-207ENST00000454583 GMLQ99445 158 aa6.21□□□□□ -1.41
RIF1-207ENST00000454583 MGAMO43451 1857 aa6.21□□□□□ -1.42
RIF1-207ENST00000454583 SERPINB2P05120 415 aa6.21□□□□□ -1.42
RIF1-207ENST00000454583 CHRM1P11229 460 aaPredicted RBP6.21□□□□□ -1.42
RIF1-207ENST00000454583 TXNRD3Q86VQ6 643 aa6.21□□□□□ -1.42
RIF1-207ENST00000454583 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.21□□□□□ -1.42
RIF1-207ENST00000454583 SPOCK2Q92563 424 aa6.21□□□□□ -1.42
RIF1-207ENST00000454583 CCDC136Q96JN2 1154 aa6.21□□□□□ -1.42
RIF1-207ENST00000454583 FGRP09769 529 aa6.21□□□□□ -1.42
RIF1-207ENST00000454583 PDE1AP54750 535 aa6.21□□□□□ -1.42
RIF1-207ENST00000454583 FKBP1AP62942 108 aaKnown RBP6.21□□□□□ -1.42
RIF1-207ENST00000454583 GRAPQ13588 217 aa6.21□□□□□ -1.42
RIF1-207ENST00000454583 LMBR1LQ6UX01 489 aa6.21□□□□□ -1.42
RIF1-207ENST00000454583 GRAPLQ8TC17 118 aaPredicted RBP6.21□□□□□ -1.42
RIF1-207ENST00000454583 FRAT1Q92837 279 aaPredicted RBP6.21□□□□□ -1.42
RIF1-207ENST00000454583 ZNF594Q96JF6 807 aaPredicted RBP6.21□□□□□ -1.42
RIF1-207ENST00000454583 FAM205AQ6ZU69 1335 aa6.2□□□□□ -1.42
RIF1-207ENST00000454583 MROH5Q6ZUA9 1318 aa6.2□□□□□ -1.42
RIF1-207ENST00000454583 IGSF3O75054 1194 aa6.2□□□□□ -1.42
RIF1-207ENST00000454583 ATP5JP18859 108 aa6.2□□□□□ -1.42
RIF1-207ENST00000454583 ITGA6P23229 1130 aa6.2□□□□□ -1.42
RIF1-207ENST00000454583 NUTM1Q86Y26 1132 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 233.7 ms