RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ZNF444Q8N0Y2 327 aaPredicted RBP13.78□□□□□ -0.2
SEC16A-207ENST00000453963 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
SEC16A-207ENST00000453963 TAOK3Q9H2K8 898 aa13.78□□□□□ -0.2
SEC16A-207ENST00000453963 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.78□□□□□ -0.2
SEC16A-207ENST00000453963 V9GYY5 206 aaPredicted RBP13.78□□□□□ -0.2
SEC16A-207ENST00000453963 ARHGEF12Q9NZN5 1544 aa13.78□□□□□ -0.2
SEC16A-207ENST00000453963 SSR1P43307 286 aaKnown RBP13.78□□□□□ -0.2
SEC16A-207ENST00000453963 DNA2P51530 1060 aa13.77□□□□□ -0.2
SEC16A-207ENST00000453963 HAND2P61296 217 aa13.77□□□□□ -0.2
SEC16A-207ENST00000453963 ERO1AQ96HE7 468 aa13.77□□□□□ -0.2
SEC16A-207ENST00000453963 SLC26A6Q9BXS9 759 aa13.77□□□□□ -0.2
SEC16A-207ENST00000453963 TRIM21P19474 475 aaKnown RBP13.77□□□□□ -0.21
SEC16A-207ENST00000453963 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.21
SEC16A-207ENST00000453963 Q6ZUG5 572 aa13.77□□□□□ -0.21
SEC16A-207ENST00000453963 MYRIPQ8NFW9 859 aa13.77□□□□□ -0.21
SEC16A-207ENST00000453963 TCOF1Q13428 1488 aaKnown RBP13.77□□□□□ -0.21
SEC16A-207ENST00000453963 RTL1A6NKG5 1358 aa13.77□□□□□ -0.21
SEC16A-207ENST00000453963 SPTLC2O15270 562 aa13.77□□□□□ -0.21
SEC16A-207ENST00000453963 LIG1P18858 919 aa13.77□□□□□ -0.21
SEC16A-207ENST00000453963 SPECC1LQ69YQ0 1117 aa13.77□□□□□ -0.21
SEC16A-207ENST00000453963 ATL3Q6DD88 541 aa13.77□□□□□ -0.21
SEC16A-207ENST00000453963 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
SEC16A-207ENST00000453963 ALG1Q9BT22 464 aa13.77□□□□□ -0.21
SEC16A-207ENST00000453963 NPC1L1Q9UHC9 1359 aa13.77□□□□□ -0.21
SEC16A-207ENST00000453963 ZBTB7BO15156 539 aaPredicted RBP13.76□□□□□ -0.21
SEC16A-207ENST00000453963 MAATS1Q7Z4T9 603 aa13.76□□□□□ -0.21
SEC16A-207ENST00000453963 ABCC10Q5T3U5 1492 aa13.76□□□□□ -0.21
SEC16A-207ENST00000453963 PPIP5K1Q6PFW1 1433 aa13.76□□□□□ -0.21
SEC16A-207ENST00000453963 AKR1B10O60218 316 aa13.76□□□□□ -0.21
SEC16A-207ENST00000453963 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.76□□□□□ -0.21
SEC16A-207ENST00000453963 RSPH14Q9UHP6 348 aa13.76□□□□□ -0.21
SEC16A-207ENST00000453963 CTAGE9A4FU28 777 aa13.76□□□□□ -0.21
SEC16A-207ENST00000453963 CAPN2P17655 700 aa13.76□□□□□ -0.21
SEC16A-207ENST00000453963 LMOD1P29536 600 aaPredicted RBP13.76□□□□□ -0.21
SEC16A-207ENST00000453963 GIGYF2Q6Y7W6 1299 aaKnown RBP13.76□□□□□ -0.21
SEC16A-207ENST00000453963 CALML4Q96GE6 196 aa13.76□□□□□ -0.21
SEC16A-207ENST00000453963 NEBLO76041 1014 aa13.76□□□□□ -0.21
SEC16A-207ENST00000453963 GOPCQ9HD26 462 aa13.76□□□□□ -0.21
SEC16A-207ENST00000453963 C6orf229H3BNL8 230 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 OPA1O60313 960 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 KIF5BP33176 963 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 MFSD6Q6ZSS7 791 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 DDX46Q7L014 1031 aaKnown RBP13.75□□□□□ -0.21
SEC16A-207ENST00000453963 RAD50Q92878 1312 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 ZMYM4Q5VZL5 1548 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 EIF2AK4Q9P2K8 1649 aaKnown RBP13.75□□□□□ -0.21
SEC16A-207ENST00000453963 GSTTP1A0A1W2PQM5 241 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 ZBTB43O43298 467 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 TOM1O60784 492 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 GTF2A1P52655 376 aaPredicted RBP13.75□□□□□ -0.21
SEC16A-207ENST00000453963 SLF2Q8IX21 1173 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 GPATCH11Q8N954 259 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 TRIM47Q96LD4 638 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 POLKQ9UBT6 870 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 TMCO5BA8MYB1 307 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 PPFIA3O75145 1194 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 IFI16Q16666 785 aaKnown RBP13.75□□□□□ -0.21
SEC16A-207ENST00000453963 CCDC40Q4G0X9 1142 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 SYT10Q6XYQ8 523 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 LRRC2Q9BYS8 371 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 DNAI2Q9GZS0 605 aa13.75□□□□□ -0.21
SEC16A-207ENST00000453963 IBSPP21815 317 aaPredicted RBP13.74□□□□□ -0.21
SEC16A-207ENST00000453963 CREB3L3Q68CJ9 461 aa13.74□□□□□ -0.21
SEC16A-207ENST00000453963 TMTC2Q8N394 836 aa13.74□□□□□ -0.21
SEC16A-207ENST00000453963 C19orf44Q9H6X5 657 aa13.74□□□□□ -0.21
SEC16A-207ENST00000453963 SNRKQ9NRH2 765 aa13.74□□□□□ -0.21
SEC16A-207ENST00000453963 EIF4A2Q14240 407 aaKnown RBP13.74□□□□□ -0.21
SEC16A-207ENST00000453963 RUFY3Q7L099 469 aa13.74□□□□□ -0.21
SEC16A-207ENST00000453963 CCDC144CPQ8IYA2 1237 aa13.74□□□□□ -0.21
SEC16A-207ENST00000453963 TSPYL6Q8N831 410 aa13.74□□□□□ -0.21
SEC16A-207ENST00000453963 IPO4Q8TEX9 1081 aaKnown RBP13.74□□□□□ -0.21
SEC16A-207ENST00000453963 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
SEC16A-207ENST00000453963 RRAGBQ5VZM2 374 aa13.74□□□□□ -0.21
SEC16A-207ENST00000453963 LRRC27Q9C0I9 530 aa13.74□□□□□ -0.21
SEC16A-207ENST00000453963 IFNKQ9P0W0 207 aa13.74□□□□□ -0.21
SEC16A-207ENST00000453963 SOS1Q07889 1333 aaPredicted RBP13.73□□□□□ -0.21
SEC16A-207ENST00000453963 GABPB1Q06547 395 aaPredicted RBP13.73□□□□□ -0.21
SEC16A-207ENST00000453963 NBPF7P0C2Y1 421 aaPredicted RBP13.73□□□□□ -0.21
SEC16A-207ENST00000453963 PPP4R3AQ6IN85 833 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 COL17A1Q9UMD9 1497 aaPredicted RBP13.73□□□□□ -0.21
SEC16A-207ENST00000453963 ZMYM3Q14202 1370 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 UBAP1LF5GYI3 381 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 GRM8O00222 908 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 LDHCP07864 332 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 IDEP14735 1019 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 KRT83P78385 493 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 AKAP4Q5JQC9 854 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 BRAPQ7Z569 592 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 RAB11FIP4Q86YS3 637 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 XAGE3Q8WTP9 111 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 BBXQ8WY36 941 aaPredicted RBP13.73□□□□□ -0.21
SEC16A-207ENST00000453963 CUL5Q93034 780 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 CHPF2Q9P2E5 772 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 HSPA4P34932 840 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
SEC16A-207ENST00000453963 TACC1O75410 805 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 NOP2P46087 812 aaKnown RBP13.72□□□□□ -0.21
SEC16A-207ENST00000453963 KRT23Q9C075 422 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms