RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ATP2B4P23634 1241 aa20.39■□□□□ 0.85
SGCE-208ENST00000450385 UBE3BQ7Z3V4 1068 aa20.39■□□□□ 0.85
SGCE-208ENST00000450385 SLC51AQ86UW1 340 aa20.39■□□□□ 0.85
SGCE-208ENST00000450385 BCL2L13Q9BXK5 485 aa20.39■□□□□ 0.85
SGCE-208ENST00000450385 PGAP2Q9UHJ9 254 aa20.39■□□□□ 0.85
SGCE-208ENST00000450385 YDJCA8MPS7 323 aa20.38■□□□□ 0.85
SGCE-208ENST00000450385 H7C1D1 291 aa20.38■□□□□ 0.85
SGCE-208ENST00000450385 HTRA3P83110 453 aa20.38■□□□□ 0.85
SGCE-208ENST00000450385 G3V3G9 751 aa20.37■□□□□ 0.85
SGCE-208ENST00000450385 RAD17O75943 681 aa20.37■□□□□ 0.85
SGCE-208ENST00000450385 GMPSP49915 693 aaPredicted RBP20.37■□□□□ 0.85
SGCE-208ENST00000450385 CASP7P55210 303 aa20.37■□□□□ 0.85
SGCE-208ENST00000450385 DCAF8Q5TAQ9 597 aa20.37■□□□□ 0.85
SGCE-208ENST00000450385 ALDH1L1O75891 902 aa20.36■□□□□ 0.85
SGCE-208ENST00000450385 UFL1O94874 794 aa20.36■□□□□ 0.85
SGCE-208ENST00000450385 IGHMBP2P38935 993 aaKnown RBP20.36■□□□□ 0.85
SGCE-208ENST00000450385 BEND3Q5T5X7 828 aa20.36■□□□□ 0.85
SGCE-208ENST00000450385 PODNQ7Z5L7 613 aa20.36■□□□□ 0.85
SGCE-208ENST00000450385 JARID2Q92833 1246 aaPredicted RBP20.36■□□□□ 0.85
SGCE-208ENST00000450385 GREM2Q9H772 168 aa20.36■□□□□ 0.85
SGCE-208ENST00000450385 CNOT7Q9UIV1 285 aaKnown RBP20.36■□□□□ 0.85
SGCE-208ENST00000450385 TRPM7Q96QT4 1865 aa20.35■□□□□ 0.85
SGCE-208ENST00000450385 RIMBP2O15034 1052 aa20.35■□□□□ 0.85
SGCE-208ENST00000450385 ECE2O60344 883 aa20.35■□□□□ 0.85
SGCE-208ENST00000450385 VIL1P09327 827 aaKnown RBP20.35■□□□□ 0.85
SGCE-208ENST00000450385 MMP14P50281 582 aa20.35■□□□□ 0.85
SGCE-208ENST00000450385 MAP1SQ66K74 1059 aaPredicted RBP20.35■□□□□ 0.85
SGCE-208ENST00000450385 ANKRD2Q9GZV1 360 aa20.35■□□□□ 0.85
SGCE-208ENST00000450385 MINPP1Q9UNW1 487 aa20.35■□□□□ 0.85
SGCE-208ENST00000450385 LEMD3Q9Y2U8 911 aa20.35■□□□□ 0.85
SGCE-208ENST00000450385 MPHOSPH8Q99549 860 aa20.34■□□□□ 0.85
SGCE-208ENST00000450385 DBNDD1Q9H9R9 158 aa20.34■□□□□ 0.85
SGCE-208ENST00000450385 ZNF609O15014 1411 aa20.34■□□□□ 0.85
SGCE-208ENST00000450385 PSMD14O00487 310 aa20.33■□□□□ 0.85
SGCE-208ENST00000450385 CT47B1P0C2W7 299 aaPredicted RBP20.33■□□□□ 0.85
SGCE-208ENST00000450385 ITGA6P23229 1130 aa20.33■□□□□ 0.85
SGCE-208ENST00000450385 SLFN5Q08AF3 891 aa20.33■□□□□ 0.85
SGCE-208ENST00000450385 CNTNAP1P78357 1384 aa20.33■□□□□ 0.84
SGCE-208ENST00000450385 COL4A1P02462 1669 aa20.32■□□□□ 0.84
SGCE-208ENST00000450385 PSME4Q14997 1843 aa20.32■□□□□ 0.84
SGCE-208ENST00000450385 PTPRCP08575 1304 aa20.32■□□□□ 0.84
SGCE-208ENST00000450385 AGBL3Q8NEM8 1001 aa20.32■□□□□ 0.84
SGCE-208ENST00000450385 CCDC85AQ96PX6 553 aaPredicted RBP20.32■□□□□ 0.84
SGCE-208ENST00000450385 MED23Q9ULK4 1368 aa20.32■□□□□ 0.84
SGCE-208ENST00000450385 ANKRD18BA2A2Z9 1011 aa20.31■□□□□ 0.84
SGCE-208ENST00000450385 GRM8O00222 908 aa20.31■□□□□ 0.84
SGCE-208ENST00000450385 CCT4P50991 539 aaKnown RBP20.31■□□□□ 0.84
SGCE-208ENST00000450385 ALDH1L2Q3SY69 923 aa20.31■□□□□ 0.84
SGCE-208ENST00000450385 SRCIN1Q9C0H9 1055 aa20.31■□□□□ 0.84
SGCE-208ENST00000450385 RASSF10A6NK89 507 aa20.3■□□□□ 0.84
SGCE-208ENST00000450385 F6X3S4 739 aa20.3■□□□□ 0.84
SGCE-208ENST00000450385 IFIT5Q13325 482 aaKnown RBP20.3■□□□□ 0.84
SGCE-208ENST00000450385 DOK7Q18PE1 504 aa20.3■□□□□ 0.84
SGCE-208ENST00000450385 CDC37L1Q7L3B6 337 aa20.3■□□□□ 0.84
SGCE-208ENST00000450385 MICALL2Q8IY33 904 aa20.3■□□□□ 0.84
SGCE-208ENST00000450385 TRMT2AQ8IZ69 625 aaKnown RBP20.3■□□□□ 0.84
SGCE-208ENST00000450385 C9orf78Q9NZ63 289 aaPredicted RBP20.3■□□□□ 0.84
SGCE-208ENST00000450385 DEFB115Q30KQ5 88 aa20.29■□□□□ 0.84
SGCE-208ENST00000450385 COA1Q9GZY4 146 aa20.29■□□□□ 0.84
SGCE-208ENST00000450385 SCN9AQ15858 1988 aa20.28■□□□□ 0.84
SGCE-208ENST00000450385 SPEF2Q9C093 1822 aa20.28■□□□□ 0.84
SGCE-208ENST00000450385 USP17L3A6NCW0 530 aa20.28■□□□□ 0.84
SGCE-208ENST00000450385 USP17L4A6NCW7 530 aa20.28■□□□□ 0.84
SGCE-208ENST00000450385 FOXO4P98177 505 aa20.28■□□□□ 0.84
SGCE-208ENST00000450385 USP17L1Q7RTZ2 530 aa20.28■□□□□ 0.84
SGCE-208ENST00000450385 CCDC57Q2TAC2 916 aa20.27■□□□□ 0.84
SGCE-208ENST00000450385 FAM161AQ3B820 660 aa20.27■□□□□ 0.84
SGCE-208ENST00000450385 RSBN1LQ6PCB5 846 aaPredicted RBP20.27■□□□□ 0.84
SGCE-208ENST00000450385 MRPL50Q8N5N7 158 aaKnown RBP20.27■□□□□ 0.84
SGCE-208ENST00000450385 HHIPL1Q96JK4 782 aa20.27■□□□□ 0.84
SGCE-208ENST00000450385 ZBTB12Q9Y330 459 aaPredicted RBP20.27■□□□□ 0.84
SGCE-208ENST00000450385 UTYO14607 1347 aa20.27■□□□□ 0.83
SGCE-208ENST00000450385 MYO3BQ8WXR4 1341 aa20.27■□□□□ 0.83
SGCE-208ENST00000450385 POLR2AP24928 1970 aaKnown RBP20.26■□□□□ 0.83
SGCE-208ENST00000450385 HIRAP54198 1017 aaPredicted RBP20.26■□□□□ 0.83
SGCE-208ENST00000450385 ZNF280AP59817 542 aaPredicted RBP20.26■□□□□ 0.83
SGCE-208ENST00000450385 SLC4A10Q6U841 1118 aa20.26■□□□□ 0.83
SGCE-208ENST00000450385 C15orf52Q6ZUT6 534 aaKnown RBP20.26■□□□□ 0.83
SGCE-208ENST00000450385 MKRN1Q9UHC7 482 aaKnown RBP20.26■□□□□ 0.83
SGCE-208ENST00000450385 ZNF804BA4D1E1 1349 aa20.26■□□□□ 0.83
SGCE-208ENST00000450385 ECE1P42892 770 aa20.25■□□□□ 0.83
SGCE-208ENST00000450385 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
SGCE-208ENST00000450385 STRIP1Q5VSL9 837 aa20.25■□□□□ 0.83
SGCE-208ENST00000450385 KCNQ5Q9NR82 932 aa20.25■□□□□ 0.83
SGCE-208ENST00000450385 CST9Q5W186 159 aa20.24■□□□□ 0.83
SGCE-208ENST00000450385 LMBR1LQ6UX01 489 aa20.24■□□□□ 0.83
SGCE-208ENST00000450385 TRPM4Q8TD43 1214 aa20.24■□□□□ 0.83
SGCE-208ENST00000450385 GPR101Q96P66 508 aaPredicted RBP20.24■□□□□ 0.83
SGCE-208ENST00000450385 GMLQ99445 158 aa20.24■□□□□ 0.83
SGCE-208ENST00000450385 ABT1Q9ULW3 272 aaKnown RBP20.24■□□□□ 0.83
SGCE-208ENST00000450385 VEGFBP49765 207 aa20.23■□□□□ 0.83
SGCE-208ENST00000450385 CHRNDQ07001 517 aa20.23■□□□□ 0.83
SGCE-208ENST00000450385 SSH1Q8WYL5 1049 aa20.23■□□□□ 0.83
SGCE-208ENST00000450385 DCPSQ96C86 337 aaKnown RBP20.23■□□□□ 0.83
SGCE-208ENST00000450385 TLL2Q9Y6L7 1015 aa20.23■□□□□ 0.83
SGCE-208ENST00000450385 USP17L8P0C7I0 530 aa20.22■□□□□ 0.83
SGCE-208ENST00000450385 KCNJ4P48050 445 aa20.22■□□□□ 0.83
SGCE-208ENST00000450385 TAF7LQ5H9L4 462 aa20.22■□□□□ 0.83
SGCE-208ENST00000450385 IFFO2Q5TF58 517 aa20.22■□□□□ 0.83
SGCE-208ENST00000450385 LDHAL6AQ6ZMR3 332 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms