RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 MNX1P50219 401 aaPredicted RBP16.77■□□□□ 0.28
AC004540.1-204ENST00000449537 INHBEP58166 350 aa16.77■□□□□ 0.28
AC004540.1-204ENST00000449537 MIS18AQ9NYP9 233 aa16.77■□□□□ 0.28
AC004540.1-204ENST00000449537 POLLQ9UGP5 575 aa16.77■□□□□ 0.28
AC004540.1-204ENST00000449537 G3V3G9 751 aa16.76■□□□□ 0.27
AC004540.1-204ENST00000449537 DCTN1Q14203 1278 aa16.76■□□□□ 0.27
AC004540.1-204ENST00000449537 DCAF8Q5TAQ9 597 aa16.76■□□□□ 0.27
AC004540.1-204ENST00000449537 NECTIN2Q92692 538 aa16.76■□□□□ 0.27
AC004540.1-204ENST00000449537 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
AC004540.1-204ENST00000449537 SCAF8Q9UPN6 1271 aaKnown RBP16.76■□□□□ 0.27
AC004540.1-204ENST00000449537 PTPN12Q05209 780 aaKnown RBP16.75■□□□□ 0.27
AC004540.1-204ENST00000449537 SLC4A8Q2Y0W8 1093 aa16.75■□□□□ 0.27
AC004540.1-204ENST00000449537 AGBL3Q8NEM8 1001 aa16.75■□□□□ 0.27
AC004540.1-204ENST00000449537 PCGF6Q9BYE7 350 aa16.75■□□□□ 0.27
AC004540.1-204ENST00000449537 ZC3H12CQ9C0D7 883 aaKnown RBP16.75■□□□□ 0.27
AC004540.1-204ENST00000449537 EFCC1Q9HA90 598 aa16.75■□□□□ 0.27
AC004540.1-204ENST00000449537 DUOX1Q9NRD9 1551 aa16.75■□□□□ 0.27
AC004540.1-204ENST00000449537 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
AC004540.1-204ENST00000449537 SPRYD7Q5W111 196 aa16.74■□□□□ 0.27
AC004540.1-204ENST00000449537 ARMC9Q7Z3E5 817 aa16.74■□□□□ 0.27
AC004540.1-204ENST00000449537 NBPF11Q86T75 865 aa16.74■□□□□ 0.27
AC004540.1-204ENST00000449537 IFNL1Q8IU54 200 aa16.74■□□□□ 0.27
AC004540.1-204ENST00000449537 MYOZ2Q9NPC6 264 aa16.74■□□□□ 0.27
AC004540.1-204ENST00000449537 MANSC4A6NHS7 340 aaPredicted RBP16.73■□□□□ 0.27
AC004540.1-204ENST00000449537 USP17L8P0C7I0 530 aa16.73■□□□□ 0.27
AC004540.1-204ENST00000449537 GPSM2P81274 684 aa16.73■□□□□ 0.27
AC004540.1-204ENST00000449537 RSBN1LQ6PCB5 846 aaPredicted RBP16.73■□□□□ 0.27
AC004540.1-204ENST00000449537 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
AC004540.1-204ENST00000449537 ZNF333Q96JL9 665 aa16.73■□□□□ 0.27
AC004540.1-204ENST00000449537 ANKRD36CQ5JPF3 1778 aa16.73■□□□□ 0.27
AC004540.1-204ENST00000449537 HTTP42858 3142 aa16.72■□□□□ 0.27
AC004540.1-204ENST00000449537 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
AC004540.1-204ENST00000449537 CC2D1BQ5T0F9 858 aaKnown RBP16.72■□□□□ 0.27
AC004540.1-204ENST00000449537 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
AC004540.1-204ENST00000449537 TRMT112Q9UI30 125 aaKnown RBP16.72■□□□□ 0.27
AC004540.1-204ENST00000449537 CENPFP49454 3210 aa16.72■□□□□ 0.27
AC004540.1-204ENST00000449537 TAF1P21675 1872 aa16.71■□□□□ 0.27
AC004540.1-204ENST00000449537 TBC1D16Q8TBP0 767 aa16.71■□□□□ 0.27
AC004540.1-204ENST00000449537 PNISRQ8TF01 805 aaKnown RBP16.71■□□□□ 0.27
AC004540.1-204ENST00000449537 DPF3Q92784 378 aa16.71■□□□□ 0.27
AC004540.1-204ENST00000449537 HSPA5P11021 654 aaKnown RBP16.7■□□□□ 0.26
AC004540.1-204ENST00000449537 PRKG1Q13976 671 aa16.7■□□□□ 0.26
AC004540.1-204ENST00000449537 LDLRAD1Q5T700 205 aa16.7■□□□□ 0.26
AC004540.1-204ENST00000449537 NLRP10Q86W26 655 aa16.7■□□□□ 0.26
AC004540.1-204ENST00000449537 CELF1Q92879 486 aaKnown RBP16.7■□□□□ 0.26
AC004540.1-204ENST00000449537 SLC10A4Q96EP9 437 aa16.7■□□□□ 0.26
AC004540.1-204ENST00000449537 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
AC004540.1-204ENST00000449537 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
AC004540.1-204ENST00000449537 LAMB2P55268 1798 aa16.69■□□□□ 0.26
AC004540.1-204ENST00000449537 EIF4A1P60842 406 aaKnown RBP16.69■□□□□ 0.26
AC004540.1-204ENST00000449537 SP3Q02447 781 aa16.69■□□□□ 0.26
AC004540.1-204ENST00000449537 SLC9C1Q4G0N8 1177 aa16.69■□□□□ 0.26
AC004540.1-204ENST00000449537 HSP90AB3PQ58FF7 597 aa16.69■□□□□ 0.26
AC004540.1-204ENST00000449537 GMLQ99445 158 aa16.69■□□□□ 0.26
AC004540.1-204ENST00000449537 COL3A1P02461 1466 aaPredicted RBP16.68■□□□□ 0.26
AC004540.1-204ENST00000449537 SCN9AQ15858 1988 aa16.68■□□□□ 0.26
AC004540.1-204ENST00000449537 ARHGEF6Q15052 776 aa16.68■□□□□ 0.26
AC004540.1-204ENST00000449537 NBPF9Q3BBW0 867 aa16.68■□□□□ 0.26
AC004540.1-204ENST00000449537 OTUD7BQ6GQQ9 843 aa16.68■□□□□ 0.26
AC004540.1-204ENST00000449537 THUMPD2Q9BTF0 503 aaKnown RBP16.68■□□□□ 0.26
AC004540.1-204ENST00000449537 ERBB4Q15303 1308 aa16.68■□□□□ 0.26
AC004540.1-204ENST00000449537 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
AC004540.1-204ENST00000449537 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.67■□□□□ 0.26
AC004540.1-204ENST00000449537 ANGEL1Q9UNK9 670 aaKnown RBP16.67■□□□□ 0.26
AC004540.1-204ENST00000449537 LRRC37AA6NMS7 1700 aa16.67■□□□□ 0.26
AC004540.1-204ENST00000449537 COL6A3P12111 3177 aa16.67■□□□□ 0.26
AC004540.1-204ENST00000449537 BRCA2P51587 3418 aa16.66■□□□□ 0.26
AC004540.1-204ENST00000449537 WTIPA6NIX2 430 aaPredicted RBP16.66■□□□□ 0.26
AC004540.1-204ENST00000449537 ZNF609O15014 1411 aa16.66■□□□□ 0.26
AC004540.1-204ENST00000449537 MYCP01106 439 aaPredicted RBP16.66■□□□□ 0.26
AC004540.1-204ENST00000449537 CRHR2Q13324 411 aa16.66■□□□□ 0.26
AC004540.1-204ENST00000449537 DDX60Q8IY21 1712 aaKnown RBP16.66■□□□□ 0.26
AC004540.1-204ENST00000449537 TIMELESSQ9UNS1 1208 aa16.66■□□□□ 0.26
AC004540.1-204ENST00000449537 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
AC004540.1-204ENST00000449537 USP17L3A6NCW0 530 aa16.65■□□□□ 0.26
AC004540.1-204ENST00000449537 USP17L4A6NCW7 530 aa16.65■□□□□ 0.26
AC004540.1-204ENST00000449537 ZBTB48P10074 688 aaPredicted RBP16.65■□□□□ 0.26
AC004540.1-204ENST00000449537 RPS8P62241 208 aaKnown RBP16.65■□□□□ 0.26
AC004540.1-204ENST00000449537 SF3B3Q15393 1217 aaKnown RBP16.65■□□□□ 0.26
AC004540.1-204ENST00000449537 USP17L1Q7RTZ2 530 aa16.65■□□□□ 0.26
AC004540.1-204ENST00000449537 PRO3102Q9H379 93 aa16.65■□□□□ 0.26
AC004540.1-204ENST00000449537 UFL1O94874 794 aa16.64■□□□□ 0.25
AC004540.1-204ENST00000449537 LRP10Q7Z4F1 713 aa16.64■□□□□ 0.25
AC004540.1-204ENST00000449537 OGFOD1Q8N543 542 aa16.64■□□□□ 0.25
AC004540.1-204ENST00000449537 PODXL2Q9NZ53 605 aa16.64■□□□□ 0.25
AC004540.1-204ENST00000449537 ANKIB1Q9P2G1 1089 aa16.64■□□□□ 0.25
AC004540.1-204ENST00000449537 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
AC004540.1-204ENST00000449537 WNT10BO00744 389 aa16.63■□□□□ 0.25
AC004540.1-204ENST00000449537 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
AC004540.1-204ENST00000449537 U2AF1L5P0DN76 240 aaPredicted RBP16.63■□□□□ 0.25
AC004540.1-204ENST00000449537 U2AF1Q01081 240 aaKnown RBP eCLIP16.63■□□□□ 0.25
AC004540.1-204ENST00000449537 CAP1Q01518 475 aa16.63■□□□□ 0.25
AC004540.1-204ENST00000449537 WNK4Q96J92 1243 aa16.63■□□□□ 0.25
AC004540.1-204ENST00000449537 CFAP53Q96M91 514 aa16.63■□□□□ 0.25
AC004540.1-204ENST00000449537 GGA1Q9UJY5 639 aa16.63■□□□□ 0.25
AC004540.1-204ENST00000449537 EIF2S2P20042 333 aaKnown RBP16.62■□□□□ 0.25
AC004540.1-204ENST00000449537 CNGB1Q14028 1251 aaPredicted RBP16.62■□□□□ 0.25
AC004540.1-204ENST00000449537 PDIA6Q15084 440 aa16.62■□□□□ 0.25
AC004540.1-204ENST00000449537 COPS6Q7L5N1 327 aa16.62■□□□□ 0.25
AC004540.1-204ENST00000449537 NR2E3Q9Y5X4 410 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms